FFCP PHASE1:Mm9::chr19:47327907..47327937,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=287|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:47327907..47327937,+|id=chr19:47327907..47327937,+|ontology_enrichment_celltype=CL:0000117!2.68e-23!23;CL:0000337!2.68e-23!23;CL:0000540!4.06e-20!33;CL:0000047!4.06e-20!33;CL:0000031!4.06e-20!33;CL:0000404!4.06e-20!33;CL:0002319!8.21e-19!43;CL:0000221!3.64e-18!44;CL:0000133!3.64e-18!44;CL:0000393!1.02e-15!39;CL:0000211!1.02e-15!39;CL:0000055!7.52e-15!50;CL:0002321!4.22e-08!70;CL:0000220!4.22e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-41,23;CL:0000337,1.61e-41,23;CL:0000540,9.15e-28,33;CL:0000047,9.15e-28,33;CL:0000031,9.15e-28,33;CL:0000404,9.15e-28,33;CL:0000393,6.80e-23,39;CL:0000211,6.80e-23,39;CL:0002319,2.12e-20,43;CL:0000221,7.55e-20,44;CL:0000133,7.55e-20,44;CL:0002321,4.99e-11,70;CL:0002610,1.37e-10,3;CL:0002612,1.58e-10,3;CL:0002614,1.83e-10,3;CL:0000120,6.06e-10,3;CL:0002613,1.38e-09,3;CL:0002611,8.61e-08,2;CL:0000723,1.35e-07,91;CL:0000048,1.35e-07,91;CL:0000034,6.84e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.66e-33!75;UBERON:0001016!2.66e-33!75;UBERON:0001017!3.06e-33!73;UBERON:0005743!3.06e-33!73;UBERON:0004121!9.22e-26!102;UBERON:0000924!9.22e-26!102;UBERON:0006601!9.22e-26!102;UBERON:0001049!1.98e-25!52;UBERON:0005068!1.98e-25!52;UBERON:0006241!1.98e-25!52;UBERON:0007135!1.98e-25!52;UBERON:0000955!1.00e-22!50;UBERON:0006238!1.00e-22!50;UBERON:0002616!6.73e-22!49;UBERON:0002020!1.98e-20!34;UBERON:0002346!5.89e-20!71;UBERON:0003075!5.89e-20!71;UBERON:0007284!5.89e-20!71;UBERON:0000033!1.46e-19!63;UBERON:0003080!1.08e-14!40;UBERON:0002791!1.66e-14!29;UBERON:0003528!1.66e-14!29;UBERON:0001893!1.66e-14!29;UBERON:0002780!8.42e-14!39;UBERON:0001890!8.42e-14!39;UBERON:0006240!8.42e-14!39;UBERON:0003056!8.29e-13!49;UBERON:0003076!1.74e-12!12;UBERON:0003057!1.74e-12!12;UBERON:0007811!3.10e-11!86;UBERON:0002420!4.36e-10!8;UBERON:0007245!4.36e-10!8;UBERON:0010009!4.36e-10!8;UBERON:0010011!4.36e-10!8;UBERON:0000454!4.36e-10!8;UBERON:0000153!4.68e-10!94;UBERON:0002240!3.06e-09!6;UBERON:0005174!3.06e-09!6;UBERON:0001137!3.06e-09!6;UBERON:0002298!1.60e-08!6;UBERON:0000025!2.67e-08!114;UBERON:0001948!4.39e-08!5;UBERON:0002315!4.39e-08!5;UBERON:0004111!1.21e-07!122;UBERON:0000956!3.45e-07!21;UBERON:0001869!3.45e-07!21;UBERON:0000203!3.45e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.92e-28,54;UBERON:0001017,4.06e-28,73;UBERON:0001016,3.12e-27,75;UBERON:0002020,1.31e-25,34;UBERON:0001049,7.72e-24,52;UBERON:0005068,7.72e-24,52;UBERON:0006241,7.72e-24,52;UBERON:0007135,7.72e-24,52;UBERON:0004121,4.12e-22,95;UBERON:0000924,4.12e-22,95;UBERON:0006601,4.12e-22,95;UBERON:0002346,2.15e-20,64;UBERON:0003075,2.15e-20,64;UBERON:0007284,2.15e-20,64;UBERON:0002240,2.35e-19,6;UBERON:0005174,2.35e-19,6;UBERON:0001137,2.35e-19,6;UBERON:0010371,2.64e-17,73;UBERON:0001948,1.12e-16,5;UBERON:0002315,1.12e-16,5;UBERON:0003076,9.59e-16,12;UBERON:0003057,9.59e-16,12;UBERON:0003528,9.70e-15,29;UBERON:0002791,9.70e-15,29;UBERON:0001893,9.70e-15,29;UBERON:0002420,1.19e-13,8;UBERON:0007245,1.19e-13,8;UBERON:0010009,1.19e-13,8;UBERON:0010011,1.19e-13,8;UBERON:0000454,1.19e-13,8;UBERON:0002616,4.94e-13,46;UBERON:0002950,8.40e-13,4;UBERON:0001891,8.40e-13,4;UBERON:0009616,8.40e-13,4;UBERON:0010286,8.40e-13,4;UBERON:0010314,9.20e-13,92;UBERON:0000955,1.10e-12,47;UBERON:0006238,1.10e-12,47;UBERON:0003080,1.22e-11,40;UBERON:0004684,1.37e-10,3;UBERON:0002275,1.37e-10,3;UBERON:0002257,1.58e-10,3;UBERON:0002038,1.83e-10,3;UBERON:0009663,1.83e-10,3;UBERON:0009661,1.83e-10,3;UBERON:0000125,1.83e-10,3;UBERON:0002308,1.83e-10,3;UBERON:0003056,2.09e-10,49;UBERON:0002780,2.69e-10,39;UBERON:0001890,2.69e-10,39;UBERON:0006240,2.69e-10,39;UBERON:0000025,2.08e-08,114;UBERON:0002256,8.61e-08,2;UBERON:0004111,1.47e-07,122;UBERON:0011216,2.90e-07,194|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0,0,0,3.64169629547276,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,9.99778445413313,8.39300455616131,1.22490799214954,0.766763768145891,0,7.70811166995721,9.06580100404833,6.91229399653096,1.84640802822271,2.19570344645783,1.56274011167028,7.53794097303729,9.00420176050688,4.73674568108111,7.66034322231536,9.5389026135399,4.28718725398191,0.151452386666368,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,1.04853447583376,0.457500602818626,0.125654352112864,1.04294592115366,0.511430914660661,0.20778804455956,0.648965052271031,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.308713837137853,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.17211686592203,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.335769232728157,0,0.187682475451182,0,0,0,0,0,0,0.68741272937475,0.685082519770642,1.5107877947794,1.35004500046361,1.35096360967266,1.81256963593682,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0.342869252385415,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr19:47327907..47327937,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:47327907..47327937,+ | |||
|id=chr19:47327907..47327937,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.68e-23!23;CL:0000337!2.68e-23!23;CL:0000540!4.06e-20!33;CL:0000047!4.06e-20!33;CL:0000031!4.06e-20!33;CL:0000404!4.06e-20!33;CL:0002319!8.21e-19!43;CL:0000221!3.64e-18!44;CL:0000133!3.64e-18!44;CL:0000393!1.02e-15!39;CL:0000211!1.02e-15!39;CL:0000055!7.52e-15!50;CL:0002321!4.22e-08!70;CL:0000220!4.22e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-41,23;CL:0000337,1.61e-41,23;CL:0000540,9.15e-28,33;CL:0000047,9.15e-28,33;CL:0000031,9.15e-28,33;CL:0000404,9.15e-28,33;CL:0000393,6.80e-23,39;CL:0000211,6.80e-23,39;CL:0002319,2.12e-20,43;CL:0000221,7.55e-20,44;CL:0000133,7.55e-20,44;CL:0002321,4.99e-11,70;CL:0002610,1.37e-10,3;CL:0002612,1.58e-10,3;CL:0002614,1.83e-10,3;CL:0000120,6.06e-10,3;CL:0002613,1.38e-09,3;CL:0002611,8.61e-08,2;CL:0000723,1.35e-07,91;CL:0000048,1.35e-07,91;CL:0000034,6.84e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.66e-33!75;UBERON:0001016!2.66e-33!75;UBERON:0001017!3.06e-33!73;UBERON:0005743!3.06e-33!73;UBERON:0004121!9.22e-26!102;UBERON:0000924!9.22e-26!102;UBERON:0006601!9.22e-26!102;UBERON:0001049!1.98e-25!52;UBERON:0005068!1.98e-25!52;UBERON:0006241!1.98e-25!52;UBERON:0007135!1.98e-25!52;UBERON:0000955!1.00e-22!50;UBERON:0006238!1.00e-22!50;UBERON:0002616!6.73e-22!49;UBERON:0002020!1.98e-20!34;UBERON:0002346!5.89e-20!71;UBERON:0003075!5.89e-20!71;UBERON:0007284!5.89e-20!71;UBERON:0000033!1.46e-19!63;UBERON:0003080!1.08e-14!40;UBERON:0002791!1.66e-14!29;UBERON:0003528!1.66e-14!29;UBERON:0001893!1.66e-14!29;UBERON:0002780!8.42e-14!39;UBERON:0001890!8.42e-14!39;UBERON:0006240!8.42e-14!39;UBERON:0003056!8.29e-13!49;UBERON:0003076!1.74e-12!12;UBERON:0003057!1.74e-12!12;UBERON:0007811!3.10e-11!86;UBERON:0002420!4.36e-10!8;UBERON:0007245!4.36e-10!8;UBERON:0010009!4.36e-10!8;UBERON:0010011!4.36e-10!8;UBERON:0000454!4.36e-10!8;UBERON:0000153!4.68e-10!94;UBERON:0002240!3.06e-09!6;UBERON:0005174!3.06e-09!6;UBERON:0001137!3.06e-09!6;UBERON:0002298!1.60e-08!6;UBERON:0000025!2.67e-08!114;UBERON:0001948!4.39e-08!5;UBERON:0002315!4.39e-08!5;UBERON:0004111!1.21e-07!122;UBERON:0000956!3.45e-07!21;UBERON:0001869!3.45e-07!21;UBERON:0000203!3.45e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.92e-28,54;UBERON:0001017,4.06e-28,73;UBERON:0001016,3.12e-27,75;UBERON:0002020,1.31e-25,34;UBERON:0001049,7.72e-24,52;UBERON:0005068,7.72e-24,52;UBERON:0006241,7.72e-24,52;UBERON:0007135,7.72e-24,52;UBERON:0004121,4.12e-22,95;UBERON:0000924,4.12e-22,95;UBERON:0006601,4.12e-22,95;UBERON:0002346,2.15e-20,64;UBERON:0003075,2.15e-20,64;UBERON:0007284,2.15e-20,64;UBERON:0002240,2.35e-19,6;UBERON:0005174,2.35e-19,6;UBERON:0001137,2.35e-19,6;UBERON:0010371,2.64e-17,73;UBERON:0001948,1.12e-16,5;UBERON:0002315,1.12e-16,5;UBERON:0003076,9.59e-16,12;UBERON:0003057,9.59e-16,12;UBERON:0003528,9.70e-15,29;UBERON:0002791,9.70e-15,29;UBERON:0001893,9.70e-15,29;UBERON:0002420,1.19e-13,8;UBERON:0007245,1.19e-13,8;UBERON:0010009,1.19e-13,8;UBERON:0010011,1.19e-13,8;UBERON:0000454,1.19e-13,8;UBERON:0002616,4.94e-13,46;UBERON:0002950,8.40e-13,4;UBERON:0001891,8.40e-13,4;UBERON:0009616,8.40e-13,4;UBERON:0010286,8.40e-13,4;UBERON:0010314,9.20e-13,92;UBERON:0000955,1.10e-12,47;UBERON:0006238,1.10e-12,47;UBERON:0003080,1.22e-11,40;UBERON:0004684,1.37e-10,3;UBERON:0002275,1.37e-10,3;UBERON:0002257,1.58e-10,3;UBERON:0002038,1.83e-10,3;UBERON:0009663,1.83e-10,3;UBERON:0009661,1.83e-10,3;UBERON:0000125,1.83e-10,3;UBERON:0002308,1.83e-10,3;UBERON:0003056,2.09e-10,49;UBERON:0002780,2.69e-10,39;UBERON:0001890,2.69e-10,39;UBERON:0006240,2.69e-10,39;UBERON:0000025,2.08e-08,114;UBERON:0002256,8.61e-08,2;UBERON:0004111,1.47e-07,122;UBERON:0011216,2.90e-07,194 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0,0,0,3.64169629547276,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,9.99778445413313,8.39300455616131,1.22490799214954,0.766763768145891,0,7.70811166995721,9.06580100404833,6.91229399653096,1.84640802822271,2.19570344645783,1.56274011167028,7.53794097303729,9.00420176050688,4.73674568108111,7.66034322231536,9.5389026135399,4.28718725398191,0.151452386666368,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,1.04853447583376,0.457500602818626,0.125654352112864,1.04294592115366,0.511430914660661,0.20778804455956,0.648965052271031,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.308713837137853,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.17211686592203,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.335769232728157,0,0.187682475451182,0,0,0,0,0,0,0.68741272937475,0.685082519770642,1.5107877947794,1.35004500046361,1.35096360967266,1.81256963593682,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0.342869252385415,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:47327907..47327937,+ | |||
}} |
Revision as of 17:55, 13 September 2013
Short description: | p@chr19:47327907..47327937, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47327907..47327937, + |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.61e-41 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-41 | 23 |
neuron | 9.15e-28 | 33 |
neuronal stem cell | 9.15e-28 | 33 |
neuroblast | 9.15e-28 | 33 |
electrically signaling cell | 9.15e-28 | 33 |
electrically responsive cell | 6.80e-23 | 39 |
electrically active cell | 6.80e-23 | 39 |
neural cell | 2.12e-20 | 43 |
ectodermal cell | 7.55e-20 | 44 |
neurectodermal cell | 7.55e-20 | 44 |
embryonic cell | 4.99e-11 | 70 |
raphe nuclei neuron | 1.37e-10 | 3 |
neuron of the ventral spinal cord | 1.58e-10 | 3 |
neuron of the substantia nigra | 1.83e-10 | 3 |
granule cell | 6.06e-10 | 3 |
striatum neuron | 1.38e-09 | 3 |
neuron of the dorsal spinal cord | 8.61e-08 | 2 |
somatic stem cell | 1.35e-07 | 91 |
multi fate stem cell | 1.35e-07 | 91 |
stem cell | 6.84e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.