FFCP PHASE1:Mm9::chr1:42751793..42751859,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66297|HGNC=|MCL_coexpression_id=1427|UniProt=|association_with_transcript=-123bp_to_NR_027826,uc007auu.1,uc007auv.1_5end|description=CAGE_peak_4_at_2610017I09Rik_5end|id=chr1:42751793..42751859,-|ontology_enrichment_celltype=CL:0000221!6.21e-23!44;CL:0000133!6.21e-23!44;CL:0002319!3.53e-22!43;CL:0000540!1.44e-18!33;CL:0000047!1.44e-18!33;CL:0000031!1.44e-18!33;CL:0000404!1.44e-18!33;CL:0000117!2.30e-18!23;CL:0000337!2.30e-18!23;CL:0000055!1.17e-16!50;CL:0000393!1.25e-13!39;CL:0000211!1.25e-13!39;CL:0002321!2.22e-08!70;CL:0000220!2.22e-08!70|ontology_enrichment_celltype_v019_2=CL:0000221,2.02e-35,44;CL:0000133,2.02e-35,44;CL:0002319,3.90e-34,43;CL:0000117,1.20e-30,23;CL:0000337,1.20e-30,23;CL:0000540,8.49e-28,33;CL:0000047,8.49e-28,33;CL:0000031,8.49e-28,33;CL:0000404,8.49e-28,33;CL:0000393,3.40e-22,39;CL:0000211,3.40e-22,39;CL:0002321,3.14e-18,70;CL:0002609,2.72e-10,6;CL:0002453,3.69e-09,8;CL:0000723,3.63e-07,91;CL:0000048,3.63e-07,91;CL:0000333,4.98e-07,10;CL:0000095,4.98e-07,10;CL:0000243,4.98e-07,10;CL:0000123,4.98e-07,10;CL:0000125,4.98e-07,10;CL:0000030,4.98e-07,10;CL:0000339,4.98e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.26e-35!73;UBERON:0005743!1.26e-35!73;UBERON:0000073!9.71e-35!75;UBERON:0001016!9.71e-35!75;UBERON:0001049!5.29e-25!52;UBERON:0005068!5.29e-25!52;UBERON:0006241!5.29e-25!52;UBERON:0007135!5.29e-25!52;UBERON:0002020!1.46e-24!34;UBERON:0004121!3.09e-24!102;UBERON:0000924!3.09e-24!102;UBERON:0006601!3.09e-24!102;UBERON:0000955!6.17e-23!50;UBERON:0006238!6.17e-23!50;UBERON:0002616!2.64e-22!49;UBERON:0000033!1.27e-21!63;UBERON:0002346!7.87e-21!71;UBERON:0003075!7.87e-21!71;UBERON:0007284!7.87e-21!71;UBERON:0002791!1.90e-20!29;UBERON:0003528!1.90e-20!29;UBERON:0001893!1.90e-20!29;UBERON:0003080!5.87e-19!40;UBERON:0002780!2.56e-18!39;UBERON:0001890!2.56e-18!39;UBERON:0006240!2.56e-18!39;UBERON:0003056!2.24e-17!49;UBERON:0000956!3.63e-15!21;UBERON:0001869!3.63e-15!21;UBERON:0000203!3.63e-15!21;UBERON:0002619!5.43e-12!17;UBERON:0007811!1.61e-10!86;UBERON:0000153!1.69e-10!94;UBERON:0000489!5.36e-09!21;UBERON:0002021!2.66e-07!10;UBERON:0000411!2.66e-07!10;UBERON:0001950!2.66e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.52e-46,73;UBERON:0001016,1.88e-44,75;UBERON:0002020,1.11e-37,34;UBERON:0004121,1.10e-33,95;UBERON:0000924,1.10e-33,95;UBERON:0006601,1.10e-33,95;UBERON:0000073,1.35e-33,54;UBERON:0001049,2.53e-31,52;UBERON:0005068,2.53e-31,52;UBERON:0006241,2.53e-31,52;UBERON:0007135,2.53e-31,52;UBERON:0003528,1.21e-30,29;UBERON:0002791,1.21e-30,29;UBERON:0001893,1.21e-30,29;UBERON:0002346,2.37e-28,64;UBERON:0003075,2.37e-28,64;UBERON:0007284,2.37e-28,64;UBERON:0010371,1.05e-26,73;UBERON:0000955,4.98e-25,47;UBERON:0006238,4.98e-25,47;UBERON:0003080,6.09e-25,40;UBERON:0002616,4.78e-24,46;UBERON:0002780,6.79e-24,39;UBERON:0001890,6.79e-24,39;UBERON:0006240,6.79e-24,39;UBERON:0000956,1.47e-21,21;UBERON:0001869,1.47e-21,21;UBERON:0000203,1.47e-21,21;UBERON:0003056,1.05e-18,49;UBERON:0010314,1.23e-18,92;UBERON:0002619,3.33e-16,17;UBERON:0002420,4.88e-10,8;UBERON:0007245,4.88e-10,8;UBERON:0010009,4.88e-10,8;UBERON:0010011,4.88e-10,8;UBERON:0000454,4.88e-10,8;UBERON:0002021,1.26e-09,10;UBERON:0000411,1.26e-09,10;UBERON:0001950,1.26e-09,10;UBERON:0004111,2.20e-09,122;UBERON:0011216,4.23e-09,194;UBERON:0000025,4.35e-09,114;UBERON:0002240,7.64e-09,6;UBERON:0005174,7.64e-09,6;UBERON:0001137,7.64e-09,6;UBERON:0001948,4.71e-08,5;UBERON:0002315,4.71e-08,5;UBERON:0001954,5.12e-08,7;UBERON:0003022,5.12e-08,7;UBERON:0002421,5.12e-08,7;UBERON:0000349,5.12e-08,7;UBERON:0002600,5.12e-08,7;UBERON:0000369,1.53e-07,5;UBERON:0002435,1.53e-07,5;UBERON:0000204,1.53e-07,5;UBERON:0010082,1.53e-07,5;UBERON:0003076,8.21e-07,12;UBERON:0003057,8.21e-07,12|phase1_expression=11.8510146857548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4274339136855,4.39372365468944,3.30530828426282,2.37976916763116,17.2503077237966,0,0,0,0,0,0,9.1042407386819,5.81890077199236,13.3104594736298,1.35537812827653,0.889294796111139,0,0,0,7.49000276296012,16.9056054341484,12.0279950277834,10.1254453748768,10.9368979902719,9.14083150092171,6.18431914664518,10.4117179332711,10.1596199279331,13.7882817991503,2.20231761998777,2.042997409363,3.68655679814984,6.72620067423989,7.50198677539759,5.2091337055676,1.95428099300967,1.12552522006336,2.29197371665215,8.83885756421003,5.12538050876771,5.21918448310842,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,4.3661460130771,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0.628340120440365,0,0,0,0,2.39665023047716,1.83000241127451,7.413606774659,2.43354048269187,1.53429274398198,1.24672826735736,1.62241263067758,0.81471491080253,0.497627882440372,1.26361379216837,0,0.650602214813519,0.229902104433473,0.540186389416048,0.150704817835715,0,0.2562274405697,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.703804496655795,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,7.71784592844633,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.758671603812327,0.685491075658373,2.25415471346161,0.610953983535943,0.969762435838129,1.1221731182451,1.39120381673366,0.590440591918409,0.627994911365499,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.169745085775188,0.234690248288502,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0.937693492737625,0,0,4.41711507182759,4.29482618726302,3.01592756825919,0.716906393857656,0.668396022247182,0.283076530788832,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,3.95326289831947,3.22227665555024,3.43737308063638,3.95262319390481,4.11049511862385,2.2661816921691,2.02506750069542,2.70192721934532,0.906284817968409,2.07104124700728,2.49089634202024,1.19707462020309,2.21953687480374,1.45864030240976,0.209613162627982,0.919217542250071,0.222246727801615,1.03017528619447,0.64183841918363,0,0.50695859978048,0,0.37456602987953,0.960377286073039,0.804096565378586,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.735994600671987,0.685738504770831,1.59728225543404,0.238436189947321,0.726732083161643,0.470546902076653,0.761531471025089,0.365855945745545,0,0.814824683075171,0.561142271657738,0.830445126869219,0.197008964751127,0.818462086339379,1.08455788830176,0.385813221962283,1.74867404556562,0.935726433781634,0.644613162144895,0.57386499620653,0,0.231867835620421|short_description=p4@2610017I09Rik}} | ||
|EntrezGene=66297 | |||
|HGNC= | |||
|MCL_coexpression_id=1427 | |||
|UniProt= | |||
|association_with_transcript=-123bp_to_NR_027826,uc007auu.1,uc007auv.1_5end | |||
|description=CAGE_peak_4_at_2610017I09Rik_5end | |||
|id=chr1:42751793..42751859,- | |||
|ontology_enrichment_celltype=CL:0000221!6.21e-23!44;CL:0000133!6.21e-23!44;CL:0002319!3.53e-22!43;CL:0000540!1.44e-18!33;CL:0000047!1.44e-18!33;CL:0000031!1.44e-18!33;CL:0000404!1.44e-18!33;CL:0000117!2.30e-18!23;CL:0000337!2.30e-18!23;CL:0000055!1.17e-16!50;CL:0000393!1.25e-13!39;CL:0000211!1.25e-13!39;CL:0002321!2.22e-08!70;CL:0000220!2.22e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.02e-35,44;CL:0000133,2.02e-35,44;CL:0002319,3.90e-34,43;CL:0000117,1.20e-30,23;CL:0000337,1.20e-30,23;CL:0000540,8.49e-28,33;CL:0000047,8.49e-28,33;CL:0000031,8.49e-28,33;CL:0000404,8.49e-28,33;CL:0000393,3.40e-22,39;CL:0000211,3.40e-22,39;CL:0002321,3.14e-18,70;CL:0002609,2.72e-10,6;CL:0002453,3.69e-09,8;CL:0000723,3.63e-07,91;CL:0000048,3.63e-07,91;CL:0000333,4.98e-07,10;CL:0000095,4.98e-07,10;CL:0000243,4.98e-07,10;CL:0000123,4.98e-07,10;CL:0000125,4.98e-07,10;CL:0000030,4.98e-07,10;CL:0000339,4.98e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.26e-35!73;UBERON:0005743!1.26e-35!73;UBERON:0000073!9.71e-35!75;UBERON:0001016!9.71e-35!75;UBERON:0001049!5.29e-25!52;UBERON:0005068!5.29e-25!52;UBERON:0006241!5.29e-25!52;UBERON:0007135!5.29e-25!52;UBERON:0002020!1.46e-24!34;UBERON:0004121!3.09e-24!102;UBERON:0000924!3.09e-24!102;UBERON:0006601!3.09e-24!102;UBERON:0000955!6.17e-23!50;UBERON:0006238!6.17e-23!50;UBERON:0002616!2.64e-22!49;UBERON:0000033!1.27e-21!63;UBERON:0002346!7.87e-21!71;UBERON:0003075!7.87e-21!71;UBERON:0007284!7.87e-21!71;UBERON:0002791!1.90e-20!29;UBERON:0003528!1.90e-20!29;UBERON:0001893!1.90e-20!29;UBERON:0003080!5.87e-19!40;UBERON:0002780!2.56e-18!39;UBERON:0001890!2.56e-18!39;UBERON:0006240!2.56e-18!39;UBERON:0003056!2.24e-17!49;UBERON:0000956!3.63e-15!21;UBERON:0001869!3.63e-15!21;UBERON:0000203!3.63e-15!21;UBERON:0002619!5.43e-12!17;UBERON:0007811!1.61e-10!86;UBERON:0000153!1.69e-10!94;UBERON:0000489!5.36e-09!21;UBERON:0002021!2.66e-07!10;UBERON:0000411!2.66e-07!10;UBERON:0001950!2.66e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.52e-46,73;UBERON:0001016,1.88e-44,75;UBERON:0002020,1.11e-37,34;UBERON:0004121,1.10e-33,95;UBERON:0000924,1.10e-33,95;UBERON:0006601,1.10e-33,95;UBERON:0000073,1.35e-33,54;UBERON:0001049,2.53e-31,52;UBERON:0005068,2.53e-31,52;UBERON:0006241,2.53e-31,52;UBERON:0007135,2.53e-31,52;UBERON:0003528,1.21e-30,29;UBERON:0002791,1.21e-30,29;UBERON:0001893,1.21e-30,29;UBERON:0002346,2.37e-28,64;UBERON:0003075,2.37e-28,64;UBERON:0007284,2.37e-28,64;UBERON:0010371,1.05e-26,73;UBERON:0000955,4.98e-25,47;UBERON:0006238,4.98e-25,47;UBERON:0003080,6.09e-25,40;UBERON:0002616,4.78e-24,46;UBERON:0002780,6.79e-24,39;UBERON:0001890,6.79e-24,39;UBERON:0006240,6.79e-24,39;UBERON:0000956,1.47e-21,21;UBERON:0001869,1.47e-21,21;UBERON:0000203,1.47e-21,21;UBERON:0003056,1.05e-18,49;UBERON:0010314,1.23e-18,92;UBERON:0002619,3.33e-16,17;UBERON:0002420,4.88e-10,8;UBERON:0007245,4.88e-10,8;UBERON:0010009,4.88e-10,8;UBERON:0010011,4.88e-10,8;UBERON:0000454,4.88e-10,8;UBERON:0002021,1.26e-09,10;UBERON:0000411,1.26e-09,10;UBERON:0001950,1.26e-09,10;UBERON:0004111,2.20e-09,122;UBERON:0011216,4.23e-09,194;UBERON:0000025,4.35e-09,114;UBERON:0002240,7.64e-09,6;UBERON:0005174,7.64e-09,6;UBERON:0001137,7.64e-09,6;UBERON:0001948,4.71e-08,5;UBERON:0002315,4.71e-08,5;UBERON:0001954,5.12e-08,7;UBERON:0003022,5.12e-08,7;UBERON:0002421,5.12e-08,7;UBERON:0000349,5.12e-08,7;UBERON:0002600,5.12e-08,7;UBERON:0000369,1.53e-07,5;UBERON:0002435,1.53e-07,5;UBERON:0000204,1.53e-07,5;UBERON:0010082,1.53e-07,5;UBERON:0003076,8.21e-07,12;UBERON:0003057,8.21e-07,12 | |||
|phase1_expression=11.8510146857548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4274339136855,4.39372365468944,3.30530828426282,2.37976916763116,17.2503077237966,0,0,0,0,0,0,9.1042407386819,5.81890077199236,13.3104594736298,1.35537812827653,0.889294796111139,0,0,0,7.49000276296012,16.9056054341484,12.0279950277834,10.1254453748768,10.9368979902719,9.14083150092171,6.18431914664518,10.4117179332711,10.1596199279331,13.7882817991503,2.20231761998777,2.042997409363,3.68655679814984,6.72620067423989,7.50198677539759,5.2091337055676,1.95428099300967,1.12552522006336,2.29197371665215,8.83885756421003,5.12538050876771,5.21918448310842,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,4.3661460130771,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0.628340120440365,0,0,0,0,2.39665023047716,1.83000241127451,7.413606774659,2.43354048269187,1.53429274398198,1.24672826735736,1.62241263067758,0.81471491080253,0.497627882440372,1.26361379216837,0,0.650602214813519,0.229902104433473,0.540186389416048,0.150704817835715,0,0.2562274405697,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.703804496655795,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,7.71784592844633,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.758671603812327,0.685491075658373,2.25415471346161,0.610953983535943,0.969762435838129,1.1221731182451,1.39120381673366,0.590440591918409,0.627994911365499,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.169745085775188,0.234690248288502,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0.937693492737625,0,0,4.41711507182759,4.29482618726302,3.01592756825919,0.716906393857656,0.668396022247182,0.283076530788832,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,3.95326289831947,3.22227665555024,3.43737308063638,3.95262319390481,4.11049511862385,2.2661816921691,2.02506750069542,2.70192721934532,0.906284817968409,2.07104124700728,2.49089634202024,1.19707462020309,2.21953687480374,1.45864030240976,0.209613162627982,0.919217542250071,0.222246727801615,1.03017528619447,0.64183841918363,0,0.50695859978048,0,0.37456602987953,0.960377286073039,0.804096565378586,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.735994600671987,0.685738504770831,1.59728225543404,0.238436189947321,0.726732083161643,0.470546902076653,0.761531471025089,0.365855945745545,0,0.814824683075171,0.561142271657738,0.830445126869219,0.197008964751127,0.818462086339379,1.08455788830176,0.385813221962283,1.74867404556562,0.935726433781634,0.644613162144895,0.57386499620653,0,0.231867835620421 | |||
|short_description=p4@2610017I09Rik | |||
}} |
Revision as of 20:24, 13 September 2013
Short description: | p4@2610017I09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2610017I09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1427 |
Association with transcript: | -123bp_to_NR_027826, uc007auu.1, uc007auv.1_5end |
EntrezGene: | 2610017I09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.02e-35 | 44 |
neurectodermal cell | 2.02e-35 | 44 |
neural cell | 3.90e-34 | 43 |
CNS neuron (sensu Vertebrata) | 1.20e-30 | 23 |
neuroblast (sensu Vertebrata) | 1.20e-30 | 23 |
neuron | 8.49e-28 | 33 |
neuronal stem cell | 8.49e-28 | 33 |
neuroblast | 8.49e-28 | 33 |
electrically signaling cell | 8.49e-28 | 33 |
electrically responsive cell | 3.40e-22 | 39 |
electrically active cell | 3.40e-22 | 39 |
embryonic cell | 3.14e-18 | 70 |
neuron of cerebral cortex | 2.72e-10 | 6 |
oligodendrocyte precursor cell | 3.69e-09 | 8 |
somatic stem cell | 3.63e-07 | 91 |
multi fate stem cell | 3.63e-07 | 91 |
migratory neural crest cell | 4.98e-07 | 10 |
neuron associated cell | 4.98e-07 | 10 |
glial cell (sensu Vertebrata) | 4.98e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.98e-07 | 10 |
glial cell | 4.98e-07 | 10 |
glioblast | 4.98e-07 | 10 |
glioblast (sensu Vertebrata) | 4.98e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.