FFCP PHASE1:Hg19::chr7:54610055..54610077,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=222008|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28499|TSSclassifier=S|UniProt=B5MCX6|association_with_transcript=-31bp_to_ENST00000404951_5end|coexpression_cluster_id=C3|description=CAGE_peak_4_at_VSTM2A_5end|id=chr7:54610055..54610077,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.08e-16;82!UBERON:0010122;7.51e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;6.57e-09;6|ontology_enrichment_disease_v019_2=DOID:169,6.43e-09,6|ontology_enrichment_uberon=UBERON:0001049!1.92e-81!57;UBERON:0005068!1.92e-81!57;UBERON:0006241!1.92e-81!57;UBERON:0007135!1.92e-81!57;UBERON:0001017!4.02e-74!82;UBERON:0000073!7.82e-73!94;UBERON:0001016!7.82e-73!94;UBERON:0005743!8.03e-73!86;UBERON:0002780!4.93e-72!41;UBERON:0001890!4.93e-72!41;UBERON:0006240!4.93e-72!41;UBERON:0003080!4.34e-70!42;UBERON:0002616!8.13e-68!59;UBERON:0001893!3.40e-66!34;UBERON:0002020!3.79e-66!34;UBERON:0003528!3.79e-66!34;UBERON:0000955!1.24e-64!69;UBERON:0006238!1.24e-64!69;UBERON:0002791!7.70e-64!33;UBERON:0001869!1.73e-62!32;UBERON:0003075!4.99e-57!86;UBERON:0007284!4.99e-57!86;UBERON:0002346!3.57e-56!90;UBERON:0002619!2.74e-54!22;UBERON:0007023!9.79e-51!115;UBERON:0001950!4.97e-50!20;UBERON:0003056!1.06e-47!61;UBERON:0000956!3.59e-47!25;UBERON:0000203!3.59e-47!25;UBERON:0000924!3.35e-34!173;UBERON:0006601!3.35e-34!173;UBERON:0000033!4.46e-34!123;UBERON:0004121!5.44e-34!169;UBERON:0000153!2.01e-33!129;UBERON:0007811!2.01e-33!129;UBERON:0002420!1.12e-20!9;UBERON:0007245!1.12e-20!9;UBERON:0010009!1.12e-20!9;UBERON:0010011!1.12e-20!9;UBERON:0000454!1.12e-20!9;UBERON:0002308!4.74e-20!9;UBERON:0000125!4.74e-20!9;UBERON:0001871!1.32e-19!7;UBERON:0000025!1.38e-19!194;UBERON:0009663!5.55e-16!7;UBERON:0000200!1.46e-15!6;UBERON:0004111!1.85e-15!241;UBERON:0002021!2.51e-13!5;UBERON:0001872!3.90e-13!5;UBERON:0003076!3.93e-13!15;UBERON:0003057!3.93e-13!15;UBERON:0002298!7.79e-13!8;UBERON:0000349!8.92e-13!5;UBERON:0000477!1.36e-11!286;UBERON:0000475!1.22e-10!365;UBERON:0000369!1.67e-10!4;UBERON:0002435!1.67e-10!4;UBERON:0000204!1.67e-10!4;UBERON:0010082!1.67e-10!4;UBERON:0000064!3.02e-10!219;UBERON:0000483!9.72e-10!309;UBERON:0000119!1.62e-09!312;UBERON:0000481!3.09e-09!347;UBERON:0002771!1.65e-08!3;UBERON:0005383!2.76e-08!3;UBERON:0005382!2.76e-08!3;UBERON:0004733!3.45e-08!12;UBERON:0002028!3.45e-08!12;UBERON:0007277!3.45e-08!12;UBERON:0000062!3.56e-08!511;UBERON:0001894!7.02e-08!7;UBERON:0006222!7.02e-08!7;UBERON:0002240!1.15e-07!3;UBERON:0000922!1.19e-07!612;UBERON:0000988!1.69e-07!3;UBERON:0004732!1.77e-07!13;UBERON:0006331!2.03e-07!3;UBERON:0002050!2.14e-07!605;UBERON:0005423!2.14e-07!605;UBERON:0001896!2.61e-07!3;UBERON:0005290!2.61e-07!3;UBERON:0010096!2.61e-07!3;UBERON:0000923!6.14e-07!604;UBERON:0005291!6.14e-07!604;UBERON:0006598!6.14e-07!604;UBERON:0002532!6.14e-07!604|ontology_enrichment_uberon_v019=UBERON:0001869;4.37e-80;32!UBERON:0002619;5.24e-77;22!UBERON:0003528;1.44e-76;34!UBERON:0002020;1.44e-76;34!UBERON:0002791;4.01e-75;32!UBERON:0001893;7.16e-72;34!UBERON:0001950;6.61e-71;20!UBERON:0000956;2.19e-67;25!UBERON:0000203;2.19e-67;25!UBERON:0002780;3.60e-59;41!UBERON:0001890;3.60e-59;41!UBERON:0000073;5.32e-41;53!UBERON:0002616;5.32e-41;53!UBERON:0000955;4.13e-32;68!UBERON:0001017;4.61e-32;75!UBERON:0001016;2.73e-25;83!UBERON:0001871;3.86e-24;6!UBERON:0002420;2.65e-23;9!UBERON:0007245;2.65e-23;9!UBERON:0010009;2.65e-23;9!UBERON:0010011;2.65e-23;9!UBERON:0000454;2.65e-23;9!UBERON:0000125;1.55e-22;9!UBERON:0002308;1.55e-22;9!UBERON:0000200;1.67e-21;6!UBERON:0002021;2.55e-18;5!UBERON:0001872;4.63e-18;5!UBERON:0000349;1.79e-17;5!UBERON:0009663;8.56e-17;7!UBERON:0000369;3.00e-14;4!UBERON:0002435;3.00e-14;4!UBERON:0000204;3.00e-14;4!UBERON:0011216;2.15e-13;132!UBERON:0001870;1.03e-11;3!UBERON:0005383;3.88e-11;3!UBERON:0005382;3.88e-11;3!UBERON:0007023;4.30e-10;114!UBERON:0002298;1.03e-08;6!UBERON:0001876;2.01e-08;2!UBERON:0002702;2.67e-08;2!UBERON:0002771;3.03e-08;2!UBERON:0001873;7.51e-08;2!UBERON:0001954;1.21e-07;2!UBERON:0003022;1.21e-07;2!UBERON:0002421;1.21e-07;2!UBERON:0002600;1.21e-07;2!UBERON:0002148;1.59e-07;2!UBERON:0006331;1.59e-07;2!UBERON:0009662;1.59e-07;2!UBERON:0001897;2.01e-07;2!UBERON:0010225;2.01e-07;2!UBERON:0010314;2.43e-07;132!UBERON:0001875;3.63e-07;2!UBERON:0006514;3.63e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.72e-89,32;UBERON:0003528,3.90e-89,34;UBERON:0002020,3.90e-89,34;UBERON:0001893,1.00e-83,34;UBERON:0001049,1.94e-83,56;UBERON:0005068,1.94e-83,56;UBERON:0006241,1.94e-83,56;UBERON:0007135,1.94e-83,56;UBERON:0002791,4.38e-83,32;UBERON:0002780,5.12e-83,41;UBERON:0001890,5.12e-83,41;UBERON:0003080,5.12e-83,41;UBERON:0006240,5.12e-83,41;UBERON:0000073,3.39e-79,53;UBERON:0002616,3.39e-79,53;UBERON:0002619,6.06e-77,22;UBERON:0001016,7.30e-73,89;UBERON:0001017,3.79e-71,81;UBERON:0001950,7.63e-71,20;UBERON:0000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=222008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |||
|TSSclassifier=S | |||
|UniProt=B5MCX6 | |||
|association_with_transcript=-31bp_to_ENST00000404951_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_VSTM2A_5end | |||
|id=chr7:54610055..54610077,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.08e-16;82!UBERON:0010122;7.51e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;6.57e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.43e-09,6 | |||
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|short_description=p4@VSTM2A | |||
}} |
Revision as of 01:34, 14 September 2013
Short description: | p4@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_VSTM2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -31bp_to_ENST00000404951_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | B5MCX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.43e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.