FFCP PHASE1:Mm9::chr7:51640007..51640044,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20981|HGNC=|MCL_coexpression_id=1|UniProt=D3Z1B8,D3YYS0|association_with_transcript=33bp_to_ENSMUST00000130707,ENSMUST00000130844_5end|description=CAGE_peak_4_at_Syt3_5end|id=chr7:51640007..51640044,+|ontology_enrichment_celltype=CL:0000117!8.64e-16!23;CL:0000337!8.64e-16!23;CL:0000540!1.89e-11!33;CL:0000047!1.89e-11!33;CL:0000031!1.89e-11!33;CL:0000404!1.89e-11!33;CL:0000221!5.24e-09!44;CL:0000133!5.24e-09!44;CL:0002319!8.51e-09!43;CL:0000393!4.17e-08!39;CL:0000211!4.17e-08!39;CL:0000055!8.35e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-23,23;CL:0000337,1.77e-23,23;CL:0000540,1.18e-14,33;CL:0000047,1.18e-14,33;CL:0000031,1.18e-14,33;CL:0000404,1.18e-14,33;CL:0000393,1.45e-11,39;CL:0000211,1.45e-11,39;CL:0002319,5.32e-10,43;CL:0000221,1.18e-09,44;CL:0000133,1.18e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.75e-27!73;UBERON:0005743!6.75e-27!73;UBERON:0000073!3.34e-26!75;UBERON:0001016!3.34e-26!75;UBERON:0001049!5.47e-26!52;UBERON:0005068!5.47e-26!52;UBERON:0006241!5.47e-26!52;UBERON:0007135!5.47e-26!52;UBERON:0000955!3.29e-24!50;UBERON:0006238!3.29e-24!50;UBERON:0002616!1.82e-23!49;UBERON:0000033!2.82e-22!63;UBERON:0002020!8.11e-21!34;UBERON:0002346!2.52e-20!71;UBERON:0003075!2.52e-20!71;UBERON:0007284!2.52e-20!71;UBERON:0004121!7.65e-20!102;UBERON:0000924!7.65e-20!102;UBERON:0006601!7.65e-20!102;UBERON:0003080!2.08e-19!40;UBERON:0002780!1.34e-18!39;UBERON:0001890!1.34e-18!39;UBERON:0006240!1.34e-18!39;UBERON:0003056!4.68e-18!49;UBERON:0002791!8.96e-17!29;UBERON:0003528!8.96e-17!29;UBERON:0001893!8.96e-17!29;UBERON:0000956!1.85e-11!21;UBERON:0001869!1.85e-11!21;UBERON:0000203!1.85e-11!21;UBERON:0007811!2.26e-11!86;UBERON:0000153!9.57e-10!94;UBERON:0002619!2.07e-09!17;UBERON:0002021!4.49e-08!10;UBERON:0000411!4.49e-08!10;UBERON:0001950!4.49e-08!10;UBERON:0003076!4.13e-07!12;UBERON:0003057!4.13e-07!12;UBERON:0004111!5.33e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.40e-38,54;UBERON:0001049,7.68e-35,52;UBERON:0005068,7.68e-35,52;UBERON:0006241,7.68e-35,52;UBERON:0007135,7.68e-35,52;UBERON:0001017,3.64e-34,73;UBERON:0001016,6.09e-33,75;UBERON:0002020,9.50e-33,34;UBERON:0002346,6.77e-28,64;UBERON:0003075,6.77e-28,64;UBERON:0007284,6.77e-28,64;UBERON:0000955,2.70e-27,47;UBERON:0006238,2.70e-27,47;UBERON:0004121,4.04e-26,95;UBERON:0000924,4.04e-26,95;UBERON:0006601,4.04e-26,95;UBERON:0002616,4.92e-26,46;UBERON:0003528,3.77e-25,29;UBERON:0002791,3.77e-25,29;UBERON:0001893,3.77e-25,29;UBERON:0010371,3.60e-23,73;UBERON:0003080,5.59e-22,40;UBERON:0002780,1.26e-20,39;UBERON:0001890,1.26e-20,39;UBERON:0006240,1.26e-20,39;UBERON:0003056,6.69e-18,49;UBERON:0010314,2.92e-16,92;UBERON:0000956,2.99e-15,21;UBERON:0001869,2.99e-15,21;UBERON:0000203,2.99e-15,21;UBERON:0002619,8.16e-15,17;UBERON:0002021,2.70e-14,10;UBERON:0000411,2.70e-14,10;UBERON:0001950,2.70e-14,10;UBERON:0003076,1.25e-13,12;UBERON:0003057,1.25e-13,12;UBERON:0004111,1.59e-11,122;UBERON:0002420,1.79e-11,8;UBERON:0007245,1.79e-11,8;UBERON:0010009,1.79e-11,8;UBERON:0010011,1.79e-11,8;UBERON:0000454,1.79e-11,8;UBERON:0000025,3.33e-11,114;UBERON:0002240,9.80e-11,6;UBERON:0005174,9.80e-11,6;UBERON:0001137,9.80e-11,6;UBERON:0001948,4.98e-09,5;UBERON:0002315,4.98e-09,5;UBERON:0000369,1.62e-07,5;UBERON:0002435,1.62e-07,5;UBERON:0000204,1.62e-07,5;UBERON:0010082,1.62e-07,5;UBERON:0011216,2.19e-07,194;UBERON:0002950,4.73e-07,4;UBERON:0001891,4.73e-07,4;UBERON:0009616,4.73e-07,4;UBERON:0010286,4.73e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.63011399117477,4.23192783417626,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,1.21505344498522,0.841299845405528,7.14127461009509,4.8591079009355,1.10241719293459,0.287536413054709,1.83843757322004,9.91042928994498,3.70293280447044,5.06901559745603,2.2420668914133,3.11057988248193,2.08365348222704,5.58365998002762,2.8138130501584,3.0559649555362,6.77645746589436,4.8406371471695,2.98239113320481,0,0.0755715601067855,0,0.860423876981386,0,1.07940638327563,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,3.80615036115011,4.1889341362691,0.255457055208591,0,0,0,4.94309110035915,5.03250663100489,1.50785222535437,5.04090528557602,3.58001640262463,3.74018480207208,3.40706652442291,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,4.41608891984667,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0,0.246794327843601,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0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| ||
|EntrezGene=20981 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=D3Z1B8,D3YYS0 | |||
|association_with_transcript=33bp_to_ENSMUST00000130707,ENSMUST00000130844_5end | |||
|description=CAGE_peak_4_at_Syt3_5end | |||
|id=chr7:51640007..51640044,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.64e-16!23;CL:0000337!8.64e-16!23;CL:0000540!1.89e-11!33;CL:0000047!1.89e-11!33;CL:0000031!1.89e-11!33;CL:0000404!1.89e-11!33;CL:0000221!5.24e-09!44;CL:0000133!5.24e-09!44;CL:0002319!8.51e-09!43;CL:0000393!4.17e-08!39;CL:0000211!4.17e-08!39;CL:0000055!8.35e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-23,23;CL:0000337,1.77e-23,23;CL:0000540,1.18e-14,33;CL:0000047,1.18e-14,33;CL:0000031,1.18e-14,33;CL:0000404,1.18e-14,33;CL:0000393,1.45e-11,39;CL:0000211,1.45e-11,39;CL:0002319,5.32e-10,43;CL:0000221,1.18e-09,44;CL:0000133,1.18e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.75e-27!73;UBERON:0005743!6.75e-27!73;UBERON:0000073!3.34e-26!75;UBERON:0001016!3.34e-26!75;UBERON:0001049!5.47e-26!52;UBERON:0005068!5.47e-26!52;UBERON:0006241!5.47e-26!52;UBERON:0007135!5.47e-26!52;UBERON:0000955!3.29e-24!50;UBERON:0006238!3.29e-24!50;UBERON:0002616!1.82e-23!49;UBERON:0000033!2.82e-22!63;UBERON:0002020!8.11e-21!34;UBERON:0002346!2.52e-20!71;UBERON:0003075!2.52e-20!71;UBERON:0007284!2.52e-20!71;UBERON:0004121!7.65e-20!102;UBERON:0000924!7.65e-20!102;UBERON:0006601!7.65e-20!102;UBERON:0003080!2.08e-19!40;UBERON:0002780!1.34e-18!39;UBERON:0001890!1.34e-18!39;UBERON:0006240!1.34e-18!39;UBERON:0003056!4.68e-18!49;UBERON:0002791!8.96e-17!29;UBERON:0003528!8.96e-17!29;UBERON:0001893!8.96e-17!29;UBERON:0000956!1.85e-11!21;UBERON:0001869!1.85e-11!21;UBERON:0000203!1.85e-11!21;UBERON:0007811!2.26e-11!86;UBERON:0000153!9.57e-10!94;UBERON:0002619!2.07e-09!17;UBERON:0002021!4.49e-08!10;UBERON:0000411!4.49e-08!10;UBERON:0001950!4.49e-08!10;UBERON:0003076!4.13e-07!12;UBERON:0003057!4.13e-07!12;UBERON:0004111!5.33e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.40e-38,54;UBERON:0001049,7.68e-35,52;UBERON:0005068,7.68e-35,52;UBERON:0006241,7.68e-35,52;UBERON:0007135,7.68e-35,52;UBERON:0001017,3.64e-34,73;UBERON:0001016,6.09e-33,75;UBERON:0002020,9.50e-33,34;UBERON:0002346,6.77e-28,64;UBERON:0003075,6.77e-28,64;UBERON:0007284,6.77e-28,64;UBERON:0000955,2.70e-27,47;UBERON:0006238,2.70e-27,47;UBERON:0004121,4.04e-26,95;UBERON:0000924,4.04e-26,95;UBERON:0006601,4.04e-26,95;UBERON:0002616,4.92e-26,46;UBERON:0003528,3.77e-25,29;UBERON:0002791,3.77e-25,29;UBERON:0001893,3.77e-25,29;UBERON:0010371,3.60e-23,73;UBERON:0003080,5.59e-22,40;UBERON:0002780,1.26e-20,39;UBERON:0001890,1.26e-20,39;UBERON:0006240,1.26e-20,39;UBERON:0003056,6.69e-18,49;UBERON:0010314,2.92e-16,92;UBERON:0000956,2.99e-15,21;UBERON:0001869,2.99e-15,21;UBERON:0000203,2.99e-15,21;UBERON:0002619,8.16e-15,17;UBERON:0002021,2.70e-14,10;UBERON:0000411,2.70e-14,10;UBERON:0001950,2.70e-14,10;UBERON:0003076,1.25e-13,12;UBERON:0003057,1.25e-13,12;UBERON:0004111,1.59e-11,122;UBERON:0002420,1.79e-11,8;UBERON:0007245,1.79e-11,8;UBERON:0010009,1.79e-11,8;UBERON:0010011,1.79e-11,8;UBERON:0000454,1.79e-11,8;UBERON:0000025,3.33e-11,114;UBERON:0002240,9.80e-11,6;UBERON:0005174,9.80e-11,6;UBERON:0001137,9.80e-11,6;UBERON:0001948,4.98e-09,5;UBERON:0002315,4.98e-09,5;UBERON:0000369,1.62e-07,5;UBERON:0002435,1.62e-07,5;UBERON:0000204,1.62e-07,5;UBERON:0010082,1.62e-07,5;UBERON:0011216,2.19e-07,194;UBERON:0002950,4.73e-07,4;UBERON:0001891,4.73e-07,4;UBERON:0009616,4.73e-07,4;UBERON:0010286,4.73e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.63011399117477,4.23192783417626,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,1.21505344498522,0.841299845405528,7.14127461009509,4.8591079009355,1.10241719293459,0.287536413054709,1.83843757322004,9.91042928994498,3.70293280447044,5.06901559745603,2.2420668914133,3.11057988248193,2.08365348222704,5.58365998002762,2.8138130501584,3.0559649555362,6.77645746589436,4.8406371471695,2.98239113320481,0,0.0755715601067855,0,0.860423876981386,0,1.07940638327563,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,3.80615036115011,4.1889341362691,0.255457055208591,0,0,0,4.94309110035915,5.03250663100489,1.50785222535437,5.04090528557602,3.58001640262463,3.74018480207208,3.40706652442291,0,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0,0.136072998302656,0.2562274405697,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0,4.41608891984667,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0,0.246794327843601,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.63303539926752,6.79827782234778,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,3.53453448063988,0,0,0,0,7.96470830039777,0,0,0,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,2.21225730555071,4.21674434299995,7.21948802737308,0.680879211507576,0,0,0.643011105094777,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0.165306911450672,1.04702376793612,0.129614973291793,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,5.01572104035363,4.51801474093653,3.22227665555024,4.58316410751517,3.43706364687375,2.74033007908257,2.2661816921691,2.02506750069542,4.05289082901798,3.17199686288943,3.62432218226274,0.103787347584177,0.399024873401031,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,1.03017528619447,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.749132059759059,0.384150914429216,0.402048282689293,0,0.695305955669133,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.564656282491984,0.338458431566706,0,0.263069711437843,0.407412341537585,1.12228454331548,0.474540072496697,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,1.24905288968973,0,0.644613162144895,0.382576664137687,0,0.231867835620421 | |||
|short_description=p4@Syt3 | |||
}} |
Revision as of 13:35, 14 September 2013
Short description: | p4@Syt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Syt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 33bp_to_ENSMUST00000130707, ENSMUST00000130844_5end |
EntrezGene: | Syt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.77e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.77e-23 | 23 |
neuron | 1.18e-14 | 33 |
neuronal stem cell | 1.18e-14 | 33 |
neuroblast | 1.18e-14 | 33 |
electrically signaling cell | 1.18e-14 | 33 |
electrically responsive cell | 1.45e-11 | 39 |
electrically active cell | 1.45e-11 | 39 |
neural cell | 5.32e-10 | 43 |
ectodermal cell | 1.18e-09 | 44 |
neurectodermal cell | 1.18e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.