FFCP PHASE1:Mm9::chr5:136387318..136387336,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=856|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:136387318..136387336,-|id=chr5:136387318..136387336,-|ontology_enrichment_celltype=CL:0000117!3.43e-15!23;CL:0000337!3.43e-15!23;CL:0000055!3.63e-15!50;CL:0002319!7.75e-15!43;CL:0000393!1.40e-14!39;CL:0000211!1.40e-14!39;CL:0000221!2.46e-14!44;CL:0000133!2.46e-14!44;CL:0000540!1.63e-13!33;CL:0000047!1.63e-13!33;CL:0000031!1.63e-13!33;CL:0000404!1.63e-13!33;CL:0002321!1.59e-08!70;CL:0000220!1.59e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,6.28e-35,23;CL:0000337,6.28e-35,23;CL:0000540,3.40e-24,33;CL:0000047,3.40e-24,33;CL:0000031,3.40e-24,33;CL:0000404,3.40e-24,33;CL:0000393,7.25e-23,39;CL:0000211,7.25e-23,39;CL:0002319,5.18e-22,43;CL:0000221,2.48e-21,44;CL:0000133,2.48e-21,44;CL:0002321,8.45e-15,70;CL:0000723,2.21e-11,91;CL:0000048,2.21e-11,91;CL:0000034,3.83e-10,97;CL:0002609,5.92e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.51e-24!73;UBERON:0005743!1.51e-24!73;UBERON:0000073!2.64e-24!75;UBERON:0001016!2.64e-24!75;UBERON:0001049!3.18e-20!52;UBERON:0005068!3.18e-20!52;UBERON:0006241!3.18e-20!52;UBERON:0007135!3.18e-20!52;UBERON:0004121!1.17e-19!102;UBERON:0000924!1.17e-19!102;UBERON:0006601!1.17e-19!102;UBERON:0002020!3.41e-19!34;UBERON:0000955!7.48e-19!50;UBERON:0006238!7.48e-19!50;UBERON:0002616!1.43e-18!49;UBERON:0000033!7.30e-17!63;UBERON:0002791!8.07e-16!29;UBERON:0003528!8.07e-16!29;UBERON:0001893!8.07e-16!29;UBERON:0002346!4.90e-15!71;UBERON:0003075!4.90e-15!71;UBERON:0007284!4.90e-15!71;UBERON:0003080!1.35e-14!40;UBERON:0002780!3.06e-14!39;UBERON:0001890!3.06e-14!39;UBERON:0006240!3.06e-14!39;UBERON:0003056!4.18e-13!49;UBERON:0000956!2.46e-11!21;UBERON:0001869!2.46e-11!21;UBERON:0000203!2.46e-11!21;UBERON:0002619!2.44e-09!17;UBERON:0000153!4.30e-09!94;UBERON:0007811!5.98e-09!86;UBERON:0000025!6.84e-09!114;UBERON:0004111!1.40e-08!122;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.05e-41,34;UBERON:0000073,1.08e-36,54;UBERON:0003528,3.16e-33,29;UBERON:0002791,3.16e-33,29;UBERON:0001893,3.16e-33,29;UBERON:0001017,8.43e-33,73;UBERON:0001016,1.29e-31,75;UBERON:0001049,3.77e-31,52;UBERON:0005068,3.77e-31,52;UBERON:0006241,3.77e-31,52;UBERON:0007135,3.77e-31,52;UBERON:0002616,8.62e-25,46;UBERON:0002780,1.11e-24,39;UBERON:0001890,1.11e-24,39;UBERON:0006240,1.11e-24,39;UBERON:0000955,4.43e-24,47;UBERON:0006238,4.43e-24,47;UBERON:0000956,6.52e-24,21;UBERON:0001869,6.52e-24,21;UBERON:0000203,6.52e-24,21;UBERON:0003080,7.21e-24,40;UBERON:0002346,1.89e-23,64;UBERON:0003075,1.89e-23,64;UBERON:0007284,1.89e-23,64;UBERON:0004121,1.56e-22,95;UBERON:0000924,1.56e-22,95;UBERON:0006601,1.56e-22,95;UBERON:0010371,2.36e-19,73;UBERON:0002619,4.73e-19,17;UBERON:0003056,4.71e-18,49;UBERON:0002021,1.86e-16,10;UBERON:0000411,1.86e-16,10;UBERON:0001950,1.86e-16,10;UBERON:0010314,2.22e-15,92;UBERON:0000025,4.05e-14,114;UBERON:0004111,1.71e-12,122;UBERON:0002420,3.41e-10,8;UBERON:0007245,3.41e-10,8;UBERON:0010009,3.41e-10,8;UBERON:0010011,3.41e-10,8;UBERON:0000454,3.41e-10,8;UBERON:0001948,3.41e-09,5;UBERON:0002315,3.41e-09,5;UBERON:0003076,1.30e-07,12;UBERON:0003057,1.30e-07,12;UBERON:0002240,1.49e-07,6;UBERON:0005174,1.49e-07,6;UBERON:0001137,1.49e-07,6;UBERON:0011216,4.08e-07,194|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0,0.129123323441576,0.563154888606667,0.468129052643987,0.34243593645101,0.478632953972018,0,0,0.333109761815663,0,0,0,0,0,0.510259740906419,0.0992909512008853,0.261199789138935,0,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0.221730510655305,0,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.550640256485045,0.782391344348039,1.52617609466313,0.439372365468944,2.13872888981712,0.979904951377538,0,0.503347818173209,1.45072428402269,0,1.80081605225163,0.573066879877513,1.03134418455488,2.83243045203437,3.70293685490423,1.26766280701236,0,0.889294796111139,0.899899717281399,3.9554654502679,3.5524005747305,0.898800331555214,2.30530983192933,1.65903379693564,5.67024940993101,1.47227472945967,5.42736870367227,6.40518768759679,1.46988959057945,2.39613677545591,2.75765635983006,9.91042928994498,4.46905683298157,7.21950706304344,2.50583946687368,4.7573574673253,4.16730696445408,10.6089539620525,5.06486349028512,5.50073691996516,8.2496003932627,4.9830088279686,2.23679334990361,0.302904773332736,0.302286240427142,0,0,2.719885334831,1.07940638327563,0,0,0.280888840263504,0.511290967734173,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.22836775943812,1.03575153458869,0,0.173485326766136,0,0.230615497256059,0.452167921657868,0.117588707135705,0.125666591329675,0.988779870937496,1.15679485535929,0,0,0.441683036920787,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0.11981512450592,0,0.635351135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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=856 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:136387318..136387336,- | |||
|description=CAGE_peak_at_chr5:136387318..136387336,- | |||
|id=chr5:136387318..136387336,- | |||
|ontology_enrichment_celltype=CL:0000117!3.43e-15!23;CL:0000337!3.43e-15!23;CL:0000055!3.63e-15!50;CL:0002319!7.75e-15!43;CL:0000393!1.40e-14!39;CL:0000211!1.40e-14!39;CL:0000221!2.46e-14!44;CL:0000133!2.46e-14!44;CL:0000540!1.63e-13!33;CL:0000047!1.63e-13!33;CL:0000031!1.63e-13!33;CL:0000404!1.63e-13!33;CL:0002321!1.59e-08!70;CL:0000220!1.59e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.28e-35,23;CL:0000337,6.28e-35,23;CL:0000540,3.40e-24,33;CL:0000047,3.40e-24,33;CL:0000031,3.40e-24,33;CL:0000404,3.40e-24,33;CL:0000393,7.25e-23,39;CL:0000211,7.25e-23,39;CL:0002319,5.18e-22,43;CL:0000221,2.48e-21,44;CL:0000133,2.48e-21,44;CL:0002321,8.45e-15,70;CL:0000723,2.21e-11,91;CL:0000048,2.21e-11,91;CL:0000034,3.83e-10,97;CL:0002609,5.92e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.51e-24!73;UBERON:0005743!1.51e-24!73;UBERON:0000073!2.64e-24!75;UBERON:0001016!2.64e-24!75;UBERON:0001049!3.18e-20!52;UBERON:0005068!3.18e-20!52;UBERON:0006241!3.18e-20!52;UBERON:0007135!3.18e-20!52;UBERON:0004121!1.17e-19!102;UBERON:0000924!1.17e-19!102;UBERON:0006601!1.17e-19!102;UBERON:0002020!3.41e-19!34;UBERON:0000955!7.48e-19!50;UBERON:0006238!7.48e-19!50;UBERON:0002616!1.43e-18!49;UBERON:0000033!7.30e-17!63;UBERON:0002791!8.07e-16!29;UBERON:0003528!8.07e-16!29;UBERON:0001893!8.07e-16!29;UBERON:0002346!4.90e-15!71;UBERON:0003075!4.90e-15!71;UBERON:0007284!4.90e-15!71;UBERON:0003080!1.35e-14!40;UBERON:0002780!3.06e-14!39;UBERON:0001890!3.06e-14!39;UBERON:0006240!3.06e-14!39;UBERON:0003056!4.18e-13!49;UBERON:0000956!2.46e-11!21;UBERON:0001869!2.46e-11!21;UBERON:0000203!2.46e-11!21;UBERON:0002619!2.44e-09!17;UBERON:0000153!4.30e-09!94;UBERON:0007811!5.98e-09!86;UBERON:0000025!6.84e-09!114;UBERON:0004111!1.40e-08!122;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.05e-41,34;UBERON:0000073,1.08e-36,54;UBERON:0003528,3.16e-33,29;UBERON:0002791,3.16e-33,29;UBERON:0001893,3.16e-33,29;UBERON:0001017,8.43e-33,73;UBERON:0001016,1.29e-31,75;UBERON:0001049,3.77e-31,52;UBERON:0005068,3.77e-31,52;UBERON:0006241,3.77e-31,52;UBERON:0007135,3.77e-31,52;UBERON:0002616,8.62e-25,46;UBERON:0002780,1.11e-24,39;UBERON:0001890,1.11e-24,39;UBERON:0006240,1.11e-24,39;UBERON:0000955,4.43e-24,47;UBERON:0006238,4.43e-24,47;UBERON:0000956,6.52e-24,21;UBERON:0001869,6.52e-24,21;UBERON:0000203,6.52e-24,21;UBERON:0003080,7.21e-24,40;UBERON:0002346,1.89e-23,64;UBERON:0003075,1.89e-23,64;UBERON:0007284,1.89e-23,64;UBERON:0004121,1.56e-22,95;UBERON:0000924,1.56e-22,95;UBERON:0006601,1.56e-22,95;UBERON:0010371,2.36e-19,73;UBERON:0002619,4.73e-19,17;UBERON:0003056,4.71e-18,49;UBERON:0002021,1.86e-16,10;UBERON:0000411,1.86e-16,10;UBERON:0001950,1.86e-16,10;UBERON:0010314,2.22e-15,92;UBERON:0000025,4.05e-14,114;UBERON:0004111,1.71e-12,122;UBERON:0002420,3.41e-10,8;UBERON:0007245,3.41e-10,8;UBERON:0010009,3.41e-10,8;UBERON:0010011,3.41e-10,8;UBERON:0000454,3.41e-10,8;UBERON:0001948,3.41e-09,5;UBERON:0002315,3.41e-09,5;UBERON:0003076,1.30e-07,12;UBERON:0003057,1.30e-07,12;UBERON:0002240,1.49e-07,6;UBERON:0005174,1.49e-07,6;UBERON:0001137,1.49e-07,6;UBERON:0011216,4.08e-07,194 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0,0.129123323441576,0.563154888606667,0.468129052643987,0.34243593645101,0.478632953972018,0,0,0.333109761815663,0,0,0,0,0,0.510259740906419,0.0992909512008853,0.261199789138935,0,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0.221730510655305,0,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.550640256485045,0.782391344348039,1.52617609466313,0.439372365468944,2.13872888981712,0.979904951377538,0,0.503347818173209,1.45072428402269,0,1.80081605225163,0.573066879877513,1.03134418455488,2.83243045203437,3.70293685490423,1.26766280701236,0,0.889294796111139,0.899899717281399,3.9554654502679,3.5524005747305,0.898800331555214,2.30530983192933,1.65903379693564,5.67024940993101,1.47227472945967,5.42736870367227,6.40518768759679,1.46988959057945,2.39613677545591,2.75765635983006,9.91042928994498,4.46905683298157,7.21950706304344,2.50583946687368,4.7573574673253,4.16730696445408,10.6089539620525,5.06486349028512,5.50073691996516,8.2496003932627,4.9830088279686,2.23679334990361,0.302904773332736,0.302286240427142,0,0,2.719885334831,1.07940638327563,0,0,0.280888840263504,0.511290967734173,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.22836775943812,1.03575153458869,0,0.173485326766136,0,0.230615497256059,0.452167921657868,0.117588707135705,0.125666591329675,0.988779870937496,1.15679485535929,0,0,0.441683036920787,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0.11981512450592,0,0.635351135365324,0.898743836428936,2.28750301409313,0.502617408451458,1.04294592115366,0.767146371990992,1.66230435647648,0.648965052271031,0,0.373220911830279,0,0,0.260240885925407,0.689706313300419,0.720248519221397,0.452114453507145,0.0680364991513279,0.2562274405697,0.0937017245597288,0.517406741478031,0.431135985865684,0.189106080167819,0.175951124163949,0,0.278047249225598,1.0447564995665,0.411564272815887,0.398068533636986,0,0.51469581422943,0,0.207125772535502,0.234526059981096,0.540186184383045,0,0.196764231747404,0.308534225774757,0.930135779001631,0,0.350296027101508,0,0.985004784474571,0.324275238183423,0.438599962275997,0.219550115291051,0.536825675041487,0.210289948564127,1.02904612379284,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.814605311381257,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0,0,0,0.274561413188081,2.87536413054709,0,0.312037673114561,0,0.358794827043824,0,0,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0.585400943573396,0.472905432318573,0,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,1.60550589987792,1.05490517932983,0.327869890753351,0.757412781613119,0.631016438832513,0,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,1.16902343164525,0.790575555893047,0.642642632843614,0.141940085208269,0.35613120733451,0,0,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0.354680467284547,0,0.658196082408484,0.608929898229199,0.469343416127421,0.21183207086382,0,0.32977250588296,0,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.927126510052548,0,0,0.370389054739423,0.188368457004691,0,0.228778173206523,0.169978429993855,0.279902904647316,0.138199973804424,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0,0.134864346384821,0.330613822901344,0,0,0.621339313086926,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0,0,0,0.453460767230423,0,0.538283139656854,0.503653849092235,0.579568782096571,0,0,0.428736758158132,0,2.82375921308533,5.9842280745933,5.72895513439397,2.23409137046794,5.48066015816514,5.2877572817279,10.8003600037089,3.15224842256954,4.07828168085784,4.14208249401456,0.518936737920883,0.798049746802062,0.170733605754134,0.243106717068294,0,0.183843508450014,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,1.2673964994512,0,0.561849044819294,0.320125762024346,0.17230640686684,0,0.115884325944855,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.25384382367503,0.914639864363863,1.05227884575137,0.543216455383447,0,0.355905054372522,0.29551344712669,1.63692417267876,0.309873682371932,0.385813221962283,0.249810577937946,0,0,0.382576664137687,0,0 | |||
|short_description=p@chr5:136387318..136387336,- | |||
}} |
Latest revision as of 19:47, 3 August 2015
Short description: | p@chr5:136387318..136387336, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:136387318..136387336, - |
Coexpression cluster: | MCL_coexpression_mm9:856 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.28e-35 | 23 |
neuroblast (sensu Vertebrata) | 6.28e-35 | 23 |
neuron | 3.40e-24 | 33 |
neuronal stem cell | 3.40e-24 | 33 |
neuroblast | 3.40e-24 | 33 |
electrically signaling cell | 3.40e-24 | 33 |
electrically responsive cell | 7.25e-23 | 39 |
electrically active cell | 7.25e-23 | 39 |
neural cell | 5.18e-22 | 43 |
ectodermal cell | 2.48e-21 | 44 |
neurectodermal cell | 2.48e-21 | 44 |
embryonic cell | 8.45e-15 | 70 |
somatic stem cell | 2.21e-11 | 91 |
multi fate stem cell | 2.21e-11 | 91 |
stem cell | 3.83e-10 | 97 |
neuron of cerebral cortex | 5.92e-09 | 6 |