FFCP PHASE1:Mm9::chr2:129418872..129418883,+: Difference between revisions
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{{FFCP|EntrezGene=19261|HGNC=|MCL_coexpression_id=1|UniProt=P97797,Q6P6I8|association_with_transcript=-47bp_to_NM_001177647,NM_007547,uc008mia.2,uc008mib.2_5end|description=CAGE_peak_16_at_Sirpa_5end|id=chr2:129418872..129418883,+|ontology_enrichment_celltype=CL:0000117!2.93e-13!23;CL:0000337!2.93e-13!23;CL:0000221!7.34e-13!44;CL:0000133!7.34e-13!44;CL:0002319!1.41e-12!43;CL:0000055!8.47e-10!50;CL:0000540!1.87e-09!33;CL:0000047!1.87e-09!33;CL:0000031!1.87e-09!33;CL:0000404!1.87e-09!33;CL:0000393!2.49e-07!39;CL:0000211!2.49e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-17,23;CL:0000337,1.87e-17,23;CL:0002319,1.91e-15,43;CL:0000221,5.73e-15,44;CL:0000133,5.73e-15,44;CL:0000540,5.96e-11,33;CL:0000047,5.96e-11,33;CL:0000031,5.96e-11,33;CL:0000404,5.96e-11,33;CL:0000393,1.12e-08,39;CL:0000211,1.12e-08,39;CL:0002321,1.99e-07,70;CL:0002610,2.34e-07,3;CL:0002453,3.00e-07,8;CL:0002614,5.87e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.30e-33!73;UBERON:0005743!8.30e-33!73;UBERON:0000073!1.08e-32!75;UBERON:0001016!1.08e-32!75;UBERON:0001049!1.55e-30!52;UBERON:0005068!1.55e-30!52;UBERON:0006241!1.55e-30!52;UBERON:0007135!1.55e-30!52;UBERON:0000955!7.30e-30!50;UBERON:0006238!7.30e-30!50;UBERON:0000033!1.37e-29!63;UBERON:0002616!5.28e-29!49;UBERON:0004121!3.70e-28!102;UBERON:0000924!3.70e-28!102;UBERON:0006601!3.70e-28!102;UBERON:0002346!9.92e-27!71;UBERON:0003075!9.92e-27!71;UBERON:0007284!9.92e-27!71;UBERON:0003056!1.27e-23!49;UBERON:0003080!2.14e-22!40;UBERON:0002780!1.47e-21!39;UBERON:0001890!1.47e-21!39;UBERON:0006240!1.47e-21!39;UBERON:0002020!3.14e-21!34;UBERON:0002791!4.44e-18!29;UBERON:0003528!4.44e-18!29;UBERON:0001893!4.44e-18!29;UBERON:0007811!1.28e-15!86;UBERON:0000153!3.51e-14!94;UBERON:0000956!1.57e-12!21;UBERON:0001869!1.57e-12!21;UBERON:0000203!1.57e-12!21;UBERON:0002619!6.55e-11!17;UBERON:0002021!5.33e-09!10;UBERON:0000411!5.33e-09!10;UBERON:0001950!5.33e-09!10;UBERON:0003076!1.79e-08!12;UBERON:0003057!1.79e-08!12;UBERON:0000025!8.30e-08!114;UBERON:0002420!8.29e-07!8;UBERON:0007245!8.29e-07!8;UBERON:0010009!8.29e-07!8;UBERON:0010011!8.29e-07!8;UBERON:0000454!8.29e-07!8;UBERON:0004111!9.46e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-44,73;UBERON:0001016,3.06e-43,75;UBERON:0000073,1.44e-41,54;UBERON:0001049,1.11e-37,52;UBERON:0005068,1.11e-37,52;UBERON:0006241,1.11e-37,52;UBERON:0007135,1.11e-37,52;UBERON:0004121,1.04e-33,95;UBERON:0000924,1.04e-33,95;UBERON:0006601,1.04e-33,95;UBERON:0000955,9.51e-33,47;UBERON:0006238,9.51e-33,47;UBERON:0002020,1.35e-32,34;UBERON:0002616,4.52e-31,46;UBERON:0002346,8.20e-31,64;UBERON:0003075,8.20e-31,64;UBERON:0007284,8.20e-31,64;UBERON:0003528,8.25e-28,29;UBERON:0002791,8.25e-28,29;UBERON:0001893,8.25e-28,29;UBERON:0010371,6.57e-26,73;UBERON:0003080,6.39e-25,40;UBERON:0002780,2.63e-23,39;UBERON:0001890,2.63e-23,39;UBERON:0006240,2.63e-23,39;UBERON:0003056,8.91e-21,49;UBERON:0002021,1.96e-19,10;UBERON:0000411,1.96e-19,10;UBERON:0001950,1.96e-19,10;UBERON:0010314,1.03e-18,92;UBERON:0002619,2.36e-17,17;UBERON:0000956,1.12e-15,21;UBERON:0001869,1.12e-15,21;UBERON:0000203,1.12e-15,21;UBERON:0002420,3.50e-14,8;UBERON:0007245,3.50e-14,8;UBERON:0010009,3.50e-14,8;UBERON:0010011,3.50e-14,8;UBERON:0000454,3.50e-14,8;UBERON:0003076,4.33e-13,12;UBERON:0003057,4.33e-13,12;UBERON:0000025,1.94e-12,114;UBERON:0004111,4.60e-11,122;UBERON:0011216,1.73e-10,194;UBERON:0000369,7.73e-09,5;UBERON:0002435,7.73e-09,5;UBERON:0000204,7.73e-09,5;UBERON:0010082,7.73e-09,5;UBERON:0002950,8.07e-09,4;UBERON:0001891,8.07e-09,4;UBERON:0009616,8.07e-09,4;UBERON:0010286,8.07e-09,4;UBERON:0002240,2.11e-07,6;UBERON:0005174,2.11e-07,6;UBERON:0001137,2.11e-07,6;UBERON:0004684,2.34e-07,3;UBERON:0002275,2.34e-07,3;UBERON:0004733,3.34e-07,6;UBERON:0004732,3.34e-07,6;UBERON:0002028,3.34e-07,6;UBERON:0007277,3.34e-07,6;UBERON:0002038,5.87e-07,3;UBERON:0009663,5.87e-07,3;UBERON:0009661,5.87e-07,3;UBERON:0000125,5.87e-07,3;UBERON:0002308,5.87e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,1.30815093828268,0.878744730937887,1.1665793944457,0,1.43752564364972,0,0,0,0,0,0,2.02316460859598,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0.449949858640699,0,0,1.19840044207362,2.30530983192933,0.725827286159344,0.675029691658453,0.210324961351382,0.856952953211411,1.54607978666129,0.857435594504678,0.575072826109418,0,3.30347642998166,4.08599481872601,5.83704826373725,1.58263545276233,1.64677758484337,2.08365348222704,2.51264699101243,2.8138130501584,4.5839474333043,2.06240009831567,1.99320353118744,1.3047961207771,0.075726193333184,0.151143120213571,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,3.59497534571574,1.37250180845588,2.01046963380583,2.25971616249959,2.30143911597297,3.1168206683934,1.46017136760982,0,0.248813941220186,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.562210347358373,1.29351685369508,0,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.134206418760372,3.78521907415429,1.23485534855141,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,4.89515115436839,0,0,1.9266070798535,1.28932855251423,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0,0.584511715822624,0,3.21321316421807,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0.16488625294148,0.484393280087717,0.241251699712623,0,0,0,2.41052892613663,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.583353565032143,0.387479470433193,0.168956125490778,0.234714477291508,0.2604087696879,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,3.3885110557024,3.22227665555024,2.86447756719698,8.07709957015332,4.7955776383945,2.2661816921691,2.70009000092722,1.35096360967266,4.53142408984205,3.62432218226274,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0.463537303779422,0,1.23625770240992,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0,0|short_description=p16@Sirpa}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19261 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P97797,uniprot:Q6P6I8 | |||
|association_with_transcript=-47bp_to_NM_001177647,NM_007547,uc008mia.2,uc008mib.2_5end | |||
|cluster_id=chr2:129418872..129418883,+ | |||
|description=CAGE_peak_16_at_Sirpa_5end | |||
|id=chr2:129418872..129418883,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.93e-13!23;CL:0000337!2.93e-13!23;CL:0000221!7.34e-13!44;CL:0000133!7.34e-13!44;CL:0002319!1.41e-12!43;CL:0000055!8.47e-10!50;CL:0000540!1.87e-09!33;CL:0000047!1.87e-09!33;CL:0000031!1.87e-09!33;CL:0000404!1.87e-09!33;CL:0000393!2.49e-07!39;CL:0000211!2.49e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-17,23;CL:0000337,1.87e-17,23;CL:0002319,1.91e-15,43;CL:0000221,5.73e-15,44;CL:0000133,5.73e-15,44;CL:0000540,5.96e-11,33;CL:0000047,5.96e-11,33;CL:0000031,5.96e-11,33;CL:0000404,5.96e-11,33;CL:0000393,1.12e-08,39;CL:0000211,1.12e-08,39;CL:0002321,1.99e-07,70;CL:0002610,2.34e-07,3;CL:0002453,3.00e-07,8;CL:0002614,5.87e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.30e-33!73;UBERON:0005743!8.30e-33!73;UBERON:0000073!1.08e-32!75;UBERON:0001016!1.08e-32!75;UBERON:0001049!1.55e-30!52;UBERON:0005068!1.55e-30!52;UBERON:0006241!1.55e-30!52;UBERON:0007135!1.55e-30!52;UBERON:0000955!7.30e-30!50;UBERON:0006238!7.30e-30!50;UBERON:0000033!1.37e-29!63;UBERON:0002616!5.28e-29!49;UBERON:0004121!3.70e-28!102;UBERON:0000924!3.70e-28!102;UBERON:0006601!3.70e-28!102;UBERON:0002346!9.92e-27!71;UBERON:0003075!9.92e-27!71;UBERON:0007284!9.92e-27!71;UBERON:0003056!1.27e-23!49;UBERON:0003080!2.14e-22!40;UBERON:0002780!1.47e-21!39;UBERON:0001890!1.47e-21!39;UBERON:0006240!1.47e-21!39;UBERON:0002020!3.14e-21!34;UBERON:0002791!4.44e-18!29;UBERON:0003528!4.44e-18!29;UBERON:0001893!4.44e-18!29;UBERON:0007811!1.28e-15!86;UBERON:0000153!3.51e-14!94;UBERON:0000956!1.57e-12!21;UBERON:0001869!1.57e-12!21;UBERON:0000203!1.57e-12!21;UBERON:0002619!6.55e-11!17;UBERON:0002021!5.33e-09!10;UBERON:0000411!5.33e-09!10;UBERON:0001950!5.33e-09!10;UBERON:0003076!1.79e-08!12;UBERON:0003057!1.79e-08!12;UBERON:0000025!8.30e-08!114;UBERON:0002420!8.29e-07!8;UBERON:0007245!8.29e-07!8;UBERON:0010009!8.29e-07!8;UBERON:0010011!8.29e-07!8;UBERON:0000454!8.29e-07!8;UBERON:0004111!9.46e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-44,73;UBERON:0001016,3.06e-43,75;UBERON:0000073,1.44e-41,54;UBERON:0001049,1.11e-37,52;UBERON:0005068,1.11e-37,52;UBERON:0006241,1.11e-37,52;UBERON:0007135,1.11e-37,52;UBERON:0004121,1.04e-33,95;UBERON:0000924,1.04e-33,95;UBERON:0006601,1.04e-33,95;UBERON:0000955,9.51e-33,47;UBERON:0006238,9.51e-33,47;UBERON:0002020,1.35e-32,34;UBERON:0002616,4.52e-31,46;UBERON:0002346,8.20e-31,64;UBERON:0003075,8.20e-31,64;UBERON:0007284,8.20e-31,64;UBERON:0003528,8.25e-28,29;UBERON:0002791,8.25e-28,29;UBERON:0001893,8.25e-28,29;UBERON:0010371,6.57e-26,73;UBERON:0003080,6.39e-25,40;UBERON:0002780,2.63e-23,39;UBERON:0001890,2.63e-23,39;UBERON:0006240,2.63e-23,39;UBERON:0003056,8.91e-21,49;UBERON:0002021,1.96e-19,10;UBERON:0000411,1.96e-19,10;UBERON:0001950,1.96e-19,10;UBERON:0010314,1.03e-18,92;UBERON:0002619,2.36e-17,17;UBERON:0000956,1.12e-15,21;UBERON:0001869,1.12e-15,21;UBERON:0000203,1.12e-15,21;UBERON:0002420,3.50e-14,8;UBERON:0007245,3.50e-14,8;UBERON:0010009,3.50e-14,8;UBERON:0010011,3.50e-14,8;UBERON:0000454,3.50e-14,8;UBERON:0003076,4.33e-13,12;UBERON:0003057,4.33e-13,12;UBERON:0000025,1.94e-12,114;UBERON:0004111,4.60e-11,122;UBERON:0011216,1.73e-10,194;UBERON:0000369,7.73e-09,5;UBERON:0002435,7.73e-09,5;UBERON:0000204,7.73e-09,5;UBERON:0010082,7.73e-09,5;UBERON:0002950,8.07e-09,4;UBERON:0001891,8.07e-09,4;UBERON:0009616,8.07e-09,4;UBERON:0010286,8.07e-09,4;UBERON:0002240,2.11e-07,6;UBERON:0005174,2.11e-07,6;UBERON:0001137,2.11e-07,6;UBERON:0004684,2.34e-07,3;UBERON:0002275,2.34e-07,3;UBERON:0004733,3.34e-07,6;UBERON:0004732,3.34e-07,6;UBERON:0002028,3.34e-07,6;UBERON:0007277,3.34e-07,6;UBERON:0002038,5.87e-07,3;UBERON:0009663,5.87e-07,3;UBERON:0009661,5.87e-07,3;UBERON:0000125,5.87e-07,3;UBERON:0002308,5.87e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,1.30815093828268,0.878744730937887,1.1665793944457,0,1.43752564364972,0,0,0,0,0,0,2.02316460859598,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0.449949858640699,0,0,1.19840044207362,2.30530983192933,0.725827286159344,0.675029691658453,0.210324961351382,0.856952953211411,1.54607978666129,0.857435594504678,0.575072826109418,0,3.30347642998166,4.08599481872601,5.83704826373725,1.58263545276233,1.64677758484337,2.08365348222704,2.51264699101243,2.8138130501584,4.5839474333043,2.06240009831567,1.99320353118744,1.3047961207771,0.075726193333184,0.151143120213571,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,3.59497534571574,1.37250180845588,2.01046963380583,2.25971616249959,2.30143911597297,3.1168206683934,1.46017136760982,0,0.248813941220186,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.562210347358373,1.29351685369508,0,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.134206418760372,3.78521907415429,1.23485534855141,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,4.89515115436839,0,0,1.9266070798535,1.28932855251423,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0,0.584511715822624,0,3.21321316421807,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0.16488625294148,0.484393280087717,0.241251699712623,0,0,0,2.41052892613663,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.583353565032143,0.387479470433193,0.168956125490778,0.234714477291508,0.2604087696879,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,3.3885110557024,3.22227665555024,2.86447756719698,8.07709957015332,4.7955776383945,2.2661816921691,2.70009000092722,1.35096360967266,4.53142408984205,3.62432218226274,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0.463537303779422,0,1.23625770240992,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0,0 | |||
|short_description=p16@Sirpa | |||
}} |
Revision as of 00:56, 4 August 2015
Short description: | p16@Sirpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Sirpa_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -47bp_to_NM_001177647, NM_007547, uc008mia.2, uc008mib.2_5end |
EntrezGene: | 19261 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.87e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.87e-17 | 23 |
neural cell | 1.91e-15 | 43 |
ectodermal cell | 5.73e-15 | 44 |
neurectodermal cell | 5.73e-15 | 44 |
neuron | 5.96e-11 | 33 |
neuronal stem cell | 5.96e-11 | 33 |
neuroblast | 5.96e-11 | 33 |
electrically signaling cell | 5.96e-11 | 33 |
electrically responsive cell | 1.12e-08 | 39 |
electrically active cell | 1.12e-08 | 39 |
embryonic cell | 1.99e-07 | 70 |
raphe nuclei neuron | 2.34e-07 | 3 |
oligodendrocyte precursor cell | 3.00e-07 | 8 |
neuron of the substantia nigra | 5.87e-07 | 3 |