FFCP PHASE1:Mm9::chr5:31116944..31116990,+: Difference between revisions
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{{FFCP|EntrezGene=100732|HGNC=|MCL_coexpression_id=60|UniProt=Q6PER3|association_with_transcript=-23bp_to_ENSMUST00000031058_5end|description=CAGE_peak_4_at_Mapre3_5end|id=chr5:31116944..31116990,+|ontology_enrichment_celltype=CL:0000117!2.90e-13!23;CL:0000337!2.90e-13!23;CL:0000221!5.47e-10!44;CL:0000133!5.47e-10!44;CL:0002319!9.69e-10!43;CL:0000540!2.69e-09!33;CL:0000047!2.69e-09!33;CL:0000031!2.69e-09!33;CL:0000404!2.69e-09!33;CL:0000055!3.65e-08!50;CL:0000393!5.10e-08!39;CL:0000211!5.10e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.77e-25,23;CL:0000337,5.77e-25,23;CL:0000540,2.67e-15,33;CL:0000047,2.67e-15,33;CL:0000031,2.67e-15,33;CL:0000404,2.67e-15,33;CL:0002319,8.93e-15,43;CL:0000221,2.89e-14,44;CL:0000133,2.89e-14,44;CL:0000393,6.24e-12,39;CL:0000211,6.24e-12,39;CL:0002609,2.11e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.27e-29!73;UBERON:0005743!3.27e-29!73;UBERON:0001049!7.66e-29!52;UBERON:0005068!7.66e-29!52;UBERON:0006241!7.66e-29!52;UBERON:0007135!7.66e-29!52;UBERON:0000955!1.83e-27!50;UBERON:0006238!1.83e-27!50;UBERON:0000073!2.31e-27!75;UBERON:0001016!2.31e-27!75;UBERON:0002616!1.20e-26!49;UBERON:0000033!1.47e-25!63;UBERON:0002346!7.66e-24!71;UBERON:0003075!7.66e-24!71;UBERON:0007284!7.66e-24!71;UBERON:0003056!4.92e-23!49;UBERON:0003080!5.15e-23!40;UBERON:0002780!2.24e-22!39;UBERON:0001890!2.24e-22!39;UBERON:0006240!2.24e-22!39;UBERON:0004121!8.67e-22!102;UBERON:0000924!8.67e-22!102;UBERON:0006601!8.67e-22!102;UBERON:0002020!9.20e-22!34;UBERON:0002791!8.46e-19!29;UBERON:0003528!8.46e-19!29;UBERON:0001893!8.46e-19!29;UBERON:0000956!5.16e-14!21;UBERON:0001869!5.16e-14!21;UBERON:0000203!5.16e-14!21;UBERON:0007811!1.15e-12!86;UBERON:0002619!6.96e-12!17;UBERON:0000153!2.94e-11!94;UBERON:0000025!8.55e-09!114;UBERON:0002021!2.29e-08!10;UBERON:0000411!2.29e-08!10;UBERON:0001950!2.29e-08!10;UBERON:0004111!7.02e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.97e-48,54;UBERON:0001049,3.42e-46,52;UBERON:0005068,3.42e-46,52;UBERON:0006241,3.42e-46,52;UBERON:0007135,3.42e-46,52;UBERON:0001017,3.58e-45,73;UBERON:0001016,1.48e-43,75;UBERON:0002020,4.67e-42,34;UBERON:0000955,1.65e-40,47;UBERON:0006238,1.65e-40,47;UBERON:0003080,8.85e-40,40;UBERON:0002616,5.69e-39,46;UBERON:0002780,1.62e-38,39;UBERON:0001890,1.62e-38,39;UBERON:0006240,1.62e-38,39;UBERON:0003528,4.32e-36,29;UBERON:0002791,4.32e-36,29;UBERON:0001893,4.32e-36,29;UBERON:0002346,6.01e-35,64;UBERON:0003075,6.01e-35,64;UBERON:0007284,6.01e-35,64;UBERON:0004121,3.86e-31,95;UBERON:0000924,3.86e-31,95;UBERON:0006601,3.86e-31,95;UBERON:0003056,2.49e-30,49;UBERON:0010371,5.90e-29,73;UBERON:0000956,1.79e-26,21;UBERON:0001869,1.79e-26,21;UBERON:0000203,1.79e-26,21;UBERON:0002619,3.37e-22,17;UBERON:0010314,3.35e-20,92;UBERON:0002021,3.63e-15,10;UBERON:0000411,3.63e-15,10;UBERON:0001950,3.63e-15,10;UBERON:0000025,8.69e-14,114;UBERON:0004111,4.73e-12,122;UBERON:0002420,1.93e-10,8;UBERON:0007245,1.93e-10,8;UBERON:0010009,1.93e-10,8;UBERON:0010011,1.93e-10,8;UBERON:0000454,1.93e-10,8;UBERON:0001954,1.64e-08,7;UBERON:0003022,1.64e-08,7;UBERON:0002421,1.64e-08,7;UBERON:0000349,1.64e-08,7;UBERON:0002600,1.64e-08,7;UBERON:0002240,1.06e-07,6;UBERON:0005174,1.06e-07,6;UBERON:0001137,1.06e-07,6;UBERON:0011216,1.13e-07,194;UBERON:0000369,1.47e-07,5;UBERON:0002435,1.47e-07,5;UBERON:0000204,1.47e-07,5;UBERON:0010082,1.47e-07,5;UBERON:0003076,5.00e-07,12;UBERON:0003057,5.00e-07,12;UBERON:0001948,7.20e-07,5;UBERON:0002315,7.20e-07,5|phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,3.48677489619386,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,0.872100625521786,1.09843091367236,1.55543919259427,0,2.87505128729943,0,0,0.672187598284928,0.257259436035947,0.286533439938757,0,3.64169629547276,5.81890077199236,4.43681982454325,0.338844532069132,0,0,0.988866362566974,0,0.898800331555214,1.53687322128622,2.17748185847803,4.59020190327748,1.68259969081106,4.28476476605705,6.18431914664518,5.87955836231779,4.2172007248024,1.83843757322004,1.10115880999389,3.19218345212969,3.22573719838111,4.08847491963601,3.47653045689157,4.68822033501084,2.23346399201105,3.93933827022176,3.51435969886663,3.83017161115768,3.55929201997757,3.91438836233131,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0.505524445014783,0.22836775943812,0,0,0,0,0.230615497256059,0.301445281105245,0.705532242814229,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,4.49371918214468,16.9275223042892,22.1151659718641,11.6462294528825,7.16003280524926,4.77912502486988,7.94982189032012,0.203678727700633,0.248813941220186,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0.36012425961069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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100732 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6PER3 | |||
|association_with_transcript=-23bp_to_ENSMUST00000031058_5end | |||
|cluster_id=chr5:31116944..31116990,+ | |||
|description=CAGE_peak_4_at_Mapre3_5end | |||
|id=chr5:31116944..31116990,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.90e-13!23;CL:0000337!2.90e-13!23;CL:0000221!5.47e-10!44;CL:0000133!5.47e-10!44;CL:0002319!9.69e-10!43;CL:0000540!2.69e-09!33;CL:0000047!2.69e-09!33;CL:0000031!2.69e-09!33;CL:0000404!2.69e-09!33;CL:0000055!3.65e-08!50;CL:0000393!5.10e-08!39;CL:0000211!5.10e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.77e-25,23;CL:0000337,5.77e-25,23;CL:0000540,2.67e-15,33;CL:0000047,2.67e-15,33;CL:0000031,2.67e-15,33;CL:0000404,2.67e-15,33;CL:0002319,8.93e-15,43;CL:0000221,2.89e-14,44;CL:0000133,2.89e-14,44;CL:0000393,6.24e-12,39;CL:0000211,6.24e-12,39;CL:0002609,2.11e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.27e-29!73;UBERON:0005743!3.27e-29!73;UBERON:0001049!7.66e-29!52;UBERON:0005068!7.66e-29!52;UBERON:0006241!7.66e-29!52;UBERON:0007135!7.66e-29!52;UBERON:0000955!1.83e-27!50;UBERON:0006238!1.83e-27!50;UBERON:0000073!2.31e-27!75;UBERON:0001016!2.31e-27!75;UBERON:0002616!1.20e-26!49;UBERON:0000033!1.47e-25!63;UBERON:0002346!7.66e-24!71;UBERON:0003075!7.66e-24!71;UBERON:0007284!7.66e-24!71;UBERON:0003056!4.92e-23!49;UBERON:0003080!5.15e-23!40;UBERON:0002780!2.24e-22!39;UBERON:0001890!2.24e-22!39;UBERON:0006240!2.24e-22!39;UBERON:0004121!8.67e-22!102;UBERON:0000924!8.67e-22!102;UBERON:0006601!8.67e-22!102;UBERON:0002020!9.20e-22!34;UBERON:0002791!8.46e-19!29;UBERON:0003528!8.46e-19!29;UBERON:0001893!8.46e-19!29;UBERON:0000956!5.16e-14!21;UBERON:0001869!5.16e-14!21;UBERON:0000203!5.16e-14!21;UBERON:0007811!1.15e-12!86;UBERON:0002619!6.96e-12!17;UBERON:0000153!2.94e-11!94;UBERON:0000025!8.55e-09!114;UBERON:0002021!2.29e-08!10;UBERON:0000411!2.29e-08!10;UBERON:0001950!2.29e-08!10;UBERON:0004111!7.02e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.97e-48,54;UBERON:0001049,3.42e-46,52;UBERON:0005068,3.42e-46,52;UBERON:0006241,3.42e-46,52;UBERON:0007135,3.42e-46,52;UBERON:0001017,3.58e-45,73;UBERON:0001016,1.48e-43,75;UBERON:0002020,4.67e-42,34;UBERON:0000955,1.65e-40,47;UBERON:0006238,1.65e-40,47;UBERON:0003080,8.85e-40,40;UBERON:0002616,5.69e-39,46;UBERON:0002780,1.62e-38,39;UBERON:0001890,1.62e-38,39;UBERON:0006240,1.62e-38,39;UBERON:0003528,4.32e-36,29;UBERON:0002791,4.32e-36,29;UBERON:0001893,4.32e-36,29;UBERON:0002346,6.01e-35,64;UBERON:0003075,6.01e-35,64;UBERON:0007284,6.01e-35,64;UBERON:0004121,3.86e-31,95;UBERON:0000924,3.86e-31,95;UBERON:0006601,3.86e-31,95;UBERON:0003056,2.49e-30,49;UBERON:0010371,5.90e-29,73;UBERON:0000956,1.79e-26,21;UBERON:0001869,1.79e-26,21;UBERON:0000203,1.79e-26,21;UBERON:0002619,3.37e-22,17;UBERON:0010314,3.35e-20,92;UBERON:0002021,3.63e-15,10;UBERON:0000411,3.63e-15,10;UBERON:0001950,3.63e-15,10;UBERON:0000025,8.69e-14,114;UBERON:0004111,4.73e-12,122;UBERON:0002420,1.93e-10,8;UBERON:0007245,1.93e-10,8;UBERON:0010009,1.93e-10,8;UBERON:0010011,1.93e-10,8;UBERON:0000454,1.93e-10,8;UBERON:0001954,1.64e-08,7;UBERON:0003022,1.64e-08,7;UBERON:0002421,1.64e-08,7;UBERON:0000349,1.64e-08,7;UBERON:0002600,1.64e-08,7;UBERON:0002240,1.06e-07,6;UBERON:0005174,1.06e-07,6;UBERON:0001137,1.06e-07,6;UBERON:0011216,1.13e-07,194;UBERON:0000369,1.47e-07,5;UBERON:0002435,1.47e-07,5;UBERON:0000204,1.47e-07,5;UBERON:0010082,1.47e-07,5;UBERON:0003076,5.00e-07,12;UBERON:0003057,5.00e-07,12;UBERON:0001948,7.20e-07,5;UBERON:0002315,7.20e-07,5 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,3.48677489619386,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,0.872100625521786,1.09843091367236,1.55543919259427,0,2.87505128729943,0,0,0.672187598284928,0.257259436035947,0.286533439938757,0,3.64169629547276,5.81890077199236,4.43681982454325,0.338844532069132,0,0,0.988866362566974,0,0.898800331555214,1.53687322128622,2.17748185847803,4.59020190327748,1.68259969081106,4.28476476605705,6.18431914664518,5.87955836231779,4.2172007248024,1.83843757322004,1.10115880999389,3.19218345212969,3.22573719838111,4.08847491963601,3.47653045689157,4.68822033501084,2.23346399201105,3.93933827022176,3.51435969886663,3.83017161115768,3.55929201997757,3.91438836233131,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0.505524445014783,0.22836775943812,0,0,0,0,0.230615497256059,0.301445281105245,0.705532242814229,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,4.49371918214468,16.9275223042892,22.1151659718641,11.6462294528825,7.16003280524926,4.77912502486988,7.94982189032012,0.203678727700633,0.248813941220186,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0.360124259610698,0.452114453507145,0.476255494059295,0.512454881139399,0.562210347358373,0.776110112217047,0.215567992932842,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.243206428637567,0,0,0.134206418760372,12.8276868624118,6.48299057989492,0,0,0.213288250535234,0,0,0,0,0.570676878337677,0,0,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.379335801906163,0.342745537829186,1.1270773567308,0,0,0.350679099451593,0.316182685621286,0.147610147979602,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0.167506257441816,0,0.585400943573396,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0,2.24770825982909,1.40654023910644,0.327869890753351,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.668396022247182,0,0.404810701674894,0.584511715822624,0,18.315315036043,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,2.04263763452273,0.36012218806262,1.03486947026204,1.07168517515796,0.886701168211368,1.07021290561242,0.658196082408484,2.13125464380219,0,0,0.661585194164886,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0.582961673259701,2.03967832211561,0,0.206386867963223,0,0,0,0,0.339956859987711,0,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0,0,0.41326727862668,0,0.259229946583586,0,27.0572610568411,0,0.330916980914195,0,0,0.168956125490778,0.469428954583016,0.13020438484395,0.104859344425711,7.73069186643219,9.79302021276743,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,13.5540442228096,20.2543104063158,20.6242384838183,14.4356673168698,12.3314853558716,10.5755145634558,12.8254275044043,12.6089936902782,8.60970577069989,12.4262474820437,0.103787347584177,0,0.512200817262403,0.486213434136588,1.25767897576789,1.65459157605013,0.888986911206461,1.23621034343337,1.60459604795908,1.26348605881899,1.52087579934144,0.377252682772152,0.936415074698824,0.89635213366817,0.689225627467359,0.952587382566147,0.463537303779422,0,0,1.91358596174717,0.342869252385415,0.887379030796687,0.715308569841963,1.16277133305863,0.941093804153306,0.761531471025089,0.914639864363863,0.263069711437843,0.679020569229309,1.12228454331548,0.593175090620871,0.394017929502254,0,0.77468420592983,1.15743966588685,3.74715866906919,0.935726433781634,0.859484216193193,0.57386499620653,0.661774257358546,0.463735671240843 | |||
|short_description=p4@Mapre3 | |||
}} |
Revision as of 06:39, 4 August 2015
Short description: | p4@Mapre3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mapre3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -23bp_to_ENSMUST00000031058_5end |
EntrezGene: | 100732 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.77e-25 | 23 |
neuroblast (sensu Vertebrata) | 5.77e-25 | 23 |
neuron | 2.67e-15 | 33 |
neuronal stem cell | 2.67e-15 | 33 |
neuroblast | 2.67e-15 | 33 |
electrically signaling cell | 2.67e-15 | 33 |
neural cell | 8.93e-15 | 43 |
ectodermal cell | 2.89e-14 | 44 |
neurectodermal cell | 2.89e-14 | 44 |
electrically responsive cell | 6.24e-12 | 39 |
electrically active cell | 6.24e-12 | 39 |
neuron of cerebral cortex | 2.11e-07 | 6 |