FFCP PHASE1:Mm9::chr8:93657926..93657937,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14339|HGNC=|MCL_coexpression_id=60|UniProt=D3Z2J4|association_with_transcript=0bp_to_ENSMUST00000125257_5end|description=CAGE_peak_2_at_Aktip_5end|id=chr8:93657926..93657937,-|ontology_enrichment_celltype=CL:0000117!1.23e-11!23;CL:0000337!1.23e-11!23;CL:0000540!5.65e-07!33;CL:0000047!5.65e-07!33;CL:0000031!5.65e-07!33;CL:0000404!5.65e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.19e-23,23;CL:0000337,4.19e-23,23;CL:0000540,6.01e-16,33;CL:0000047,6.01e-16,33;CL:0000031,6.01e-16,33;CL:0000404,6.01e-16,33;CL:0000393,1.32e-12,39;CL:0000211,1.32e-12,39;CL:0000221,1.15e-11,44;CL:0000133,1.15e-11,44;CL:0002319,6.55e-11,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.95e-21!52;UBERON:0005068!2.95e-21!52;UBERON:0006241!2.95e-21!52;UBERON:0007135!2.95e-21!52;UBERON:0002346!5.84e-21!71;UBERON:0003075!5.84e-21!71;UBERON:0007284!5.84e-21!71;UBERON:0000033!7.43e-21!63;UBERON:0000955!1.98e-18!50;UBERON:0006238!1.98e-18!50;UBERON:0002616!7.36e-18!49;UBERON:0001017!1.17e-17!73;UBERON:0005743!1.17e-17!73;UBERON:0002020!1.20e-17!34;UBERON:0000073!5.59e-17!75;UBERON:0001016!5.59e-17!75;UBERON:0004121!5.63e-17!102;UBERON:0000924!5.63e-17!102;UBERON:0006601!5.63e-17!102;UBERON:0003056!6.99e-17!49;UBERON:0003080!6.94e-16!40;UBERON:0002780!2.92e-15!39;UBERON:0001890!2.92e-15!39;UBERON:0006240!2.92e-15!39;UBERON:0002791!1.14e-14!29;UBERON:0003528!1.14e-14!29;UBERON:0001893!1.14e-14!29;UBERON:0007811!1.60e-11!86;UBERON:0000153!3.27e-11!94;UBERON:0004111!3.92e-10!122;UBERON:0000956!5.03e-10!21;UBERON:0001869!5.03e-10!21;UBERON:0000203!5.03e-10!21;UBERON:0000025!4.46e-09!114;UBERON:0002619!2.97e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.09e-33,54;UBERON:0001049,1.05e-32,52;UBERON:0005068,1.05e-32,52;UBERON:0006241,1.05e-32,52;UBERON:0007135,1.05e-32,52;UBERON:0001017,1.32e-31,73;UBERON:0001016,1.88e-30,75;UBERON:0002346,1.12e-27,64;UBERON:0003075,1.12e-27,64;UBERON:0007284,1.12e-27,64;UBERON:0010371,2.18e-27,73;UBERON:0004121,9.85e-27,95;UBERON:0000924,9.85e-27,95;UBERON:0006601,9.85e-27,95;UBERON:0002020,1.76e-26,34;UBERON:0000955,6.62e-26,47;UBERON:0006238,6.62e-26,47;UBERON:0002616,1.07e-24,46;UBERON:0010314,8.80e-22,92;UBERON:0003080,4.36e-21,40;UBERON:0003528,6.42e-20,29;UBERON:0002791,6.42e-20,29;UBERON:0001893,6.42e-20,29;UBERON:0002780,8.33e-20,39;UBERON:0001890,8.33e-20,39;UBERON:0006240,8.33e-20,39;UBERON:0003056,1.51e-18,49;UBERON:0004111,6.89e-13,122;UBERON:0003076,2.63e-12,12;UBERON:0003057,2.63e-12,12;UBERON:0000025,6.99e-12,114;UBERON:0000956,1.06e-11,21;UBERON:0001869,1.06e-11,21;UBERON:0000203,1.06e-11,21;UBERON:0002420,5.17e-10,8;UBERON:0007245,5.17e-10,8;UBERON:0010009,5.17e-10,8;UBERON:0010011,5.17e-10,8;UBERON:0000454,5.17e-10,8;UBERON:0002240,8.88e-10,6;UBERON:0005174,8.88e-10,6;UBERON:0001137,8.88e-10,6;UBERON:0002619,2.05e-09,17;UBERON:0001948,3.25e-08,5;UBERON:0002315,3.25e-08,5;UBERON:0002950,7.23e-08,4;UBERON:0001891,7.23e-08,4;UBERON:0009616,7.23e-08,4;UBERON:0010286,7.23e-08,4;UBERON:0002021,3.33e-07,10;UBERON:0000411,3.33e-07,10;UBERON:0001950,3.33e-07,10;UBERON:0000483,6.16e-07,174;UBERON:0000119,9.73e-07,176|phase1_expression=1.28119077683835,0,0,0.30246421130683,0,0.33575854382378,0,0,0,0,0,0.159544317990673,0,0.0874204024189974,0,0,0,0,0.548457734422955,0,1.61582251287033,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0.816677425049476,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0.439372365468944,0.388859798148567,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0,1.41621522601718,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0.384218305321555,1.34796496001021,0.945041568321835,1.05162480675691,2.28520787523043,1.76694832761291,1.95985278743926,1.24599112323707,0.919218786610021,0,3.31987079021488,4.45458946443106,2.2420668914133,1.9212405156506,1.56274011167028,4.74611098302348,4.50210088025344,3.66715794664344,2.06240009831567,2.84743361598206,2.05039390407831,0.151452386666368,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0,0,0.842666520790511,0,0,0.35333957451034,1.12674735821344,0,0,0,0.432982082022428,0,0.505524445014783,0.45673551887624,0.258937883647172,0.742210695324124,0.520455980298408,0.304465478312141,0,0.301445281105245,0.352766121407114,0.502666365318702,0.247194967734374,0.144599356919912,0,0.161766849947409,0.662524555381181,0,0,2.34224637609238,1.46612694769419,0.255457055208591,0,0.599902730993408,0.127070227073065,2.54644086988199,0.915001205637253,3.14135880282161,2.9550134432687,1.53429274398198,3.32460871295296,1.94689515681309,0.611036183101898,0.248813941220186,0.252722758433675,0.210441855886474,0.520481771850815,0.689706313300419,1.0803727788321,0.150704817835715,0.680364991513279,0.640568601424249,1.12442069471675,0.776110112217047,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.710234206755631,0.983821158737019,0.462801338662135,0.697601834251224,0.268273401399619,0.817357396570186,0.658239399653922,1.14917224855367,1.37816976227955,0.438599962275997,1.09775057645525,0.536825675041487,2.52347938276953,2.98423375899925,0.660837565967596,0,0.213288250535234,0.232236671860439,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.203651327845314,0.387904974335251,0,0.379419222745544,0.295220295959204,0.156998727841375,0.123397163921801,0.592905254174298,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0,0.315270288212382,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,4.81651769963376,2.22702204525186,0.327869890753351,1.51482556322624,0.631016438832513,0,0.430846795465598,0,0,0,0,0,0.395287777946524,1.92792789853084,0.283880170416537,0.712262414669021,0.488660878060728,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.307435147943927,0,1.09060118843252,0,0.316036757935816,0,0,1.36175842301515,0.36012218806262,0.129358683782755,0.428674070063185,0.709360934569094,0.178368817602071,0.329098041204242,1.2178597964584,0,0.63549621259146,0,1.48397627647332,0.161464426695906,0.180938774784468,0.358117032009409,0,0.291480836629851,3.52308073819968,0.170870880797853,0,0.370389054739423,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0.949007980743406,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,0,0.259229946583586,0.621339313086926,13.5286305284206,0.299033092087958,0,0.194451188344048,0.258319646955462,0.506868376472335,0.352071715937262,0.2604087696879,1.04859344425711,5.79801889982414,9.79302021276743,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0.596044064343795,0.360586348559907,0.147689527174577,0.605798699688886,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.350630706544707,0.453460767230423,0,0.269141569828427,0,0.579568782096571,0,0,0.214368379079066,1.50471631210609,2.82375921308533,0.920650473014354,0.572895513439397,0.859265911718438,4.7955776383945,1.5107877947794,1.35004500046361,2.2516060161211,2.26571204492102,2.07104124700728,0.62272408550506,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.640251524048693,0.574354689556133,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.735994600671987,0,0,0.715308569841963,0.581385666529314,0.470546902076653,0.592302255241736,0.914639864363863,0,0.271608227691724,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,1.08455788830176,0.385813221962283,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p2@Aktip}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14339 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z2J4 | |||
|association_with_transcript=0bp_to_ENSMUST00000125257_5end | |||
|cluster_id=chr8:93657926..93657937,- | |||
|description=CAGE_peak_2_at_Aktip_5end | |||
|id=chr8:93657926..93657937,- | |||
|ontology_enrichment_celltype=CL:0000117!1.23e-11!23;CL:0000337!1.23e-11!23;CL:0000540!5.65e-07!33;CL:0000047!5.65e-07!33;CL:0000031!5.65e-07!33;CL:0000404!5.65e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.19e-23,23;CL:0000337,4.19e-23,23;CL:0000540,6.01e-16,33;CL:0000047,6.01e-16,33;CL:0000031,6.01e-16,33;CL:0000404,6.01e-16,33;CL:0000393,1.32e-12,39;CL:0000211,1.32e-12,39;CL:0000221,1.15e-11,44;CL:0000133,1.15e-11,44;CL:0002319,6.55e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.95e-21!52;UBERON:0005068!2.95e-21!52;UBERON:0006241!2.95e-21!52;UBERON:0007135!2.95e-21!52;UBERON:0002346!5.84e-21!71;UBERON:0003075!5.84e-21!71;UBERON:0007284!5.84e-21!71;UBERON:0000033!7.43e-21!63;UBERON:0000955!1.98e-18!50;UBERON:0006238!1.98e-18!50;UBERON:0002616!7.36e-18!49;UBERON:0001017!1.17e-17!73;UBERON:0005743!1.17e-17!73;UBERON:0002020!1.20e-17!34;UBERON:0000073!5.59e-17!75;UBERON:0001016!5.59e-17!75;UBERON:0004121!5.63e-17!102;UBERON:0000924!5.63e-17!102;UBERON:0006601!5.63e-17!102;UBERON:0003056!6.99e-17!49;UBERON:0003080!6.94e-16!40;UBERON:0002780!2.92e-15!39;UBERON:0001890!2.92e-15!39;UBERON:0006240!2.92e-15!39;UBERON:0002791!1.14e-14!29;UBERON:0003528!1.14e-14!29;UBERON:0001893!1.14e-14!29;UBERON:0007811!1.60e-11!86;UBERON:0000153!3.27e-11!94;UBERON:0004111!3.92e-10!122;UBERON:0000956!5.03e-10!21;UBERON:0001869!5.03e-10!21;UBERON:0000203!5.03e-10!21;UBERON:0000025!4.46e-09!114;UBERON:0002619!2.97e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.09e-33,54;UBERON:0001049,1.05e-32,52;UBERON:0005068,1.05e-32,52;UBERON:0006241,1.05e-32,52;UBERON:0007135,1.05e-32,52;UBERON:0001017,1.32e-31,73;UBERON:0001016,1.88e-30,75;UBERON:0002346,1.12e-27,64;UBERON:0003075,1.12e-27,64;UBERON:0007284,1.12e-27,64;UBERON:0010371,2.18e-27,73;UBERON:0004121,9.85e-27,95;UBERON:0000924,9.85e-27,95;UBERON:0006601,9.85e-27,95;UBERON:0002020,1.76e-26,34;UBERON:0000955,6.62e-26,47;UBERON:0006238,6.62e-26,47;UBERON:0002616,1.07e-24,46;UBERON:0010314,8.80e-22,92;UBERON:0003080,4.36e-21,40;UBERON:0003528,6.42e-20,29;UBERON:0002791,6.42e-20,29;UBERON:0001893,6.42e-20,29;UBERON:0002780,8.33e-20,39;UBERON:0001890,8.33e-20,39;UBERON:0006240,8.33e-20,39;UBERON:0003056,1.51e-18,49;UBERON:0004111,6.89e-13,122;UBERON:0003076,2.63e-12,12;UBERON:0003057,2.63e-12,12;UBERON:0000025,6.99e-12,114;UBERON:0000956,1.06e-11,21;UBERON:0001869,1.06e-11,21;UBERON:0000203,1.06e-11,21;UBERON:0002420,5.17e-10,8;UBERON:0007245,5.17e-10,8;UBERON:0010009,5.17e-10,8;UBERON:0010011,5.17e-10,8;UBERON:0000454,5.17e-10,8;UBERON:0002240,8.88e-10,6;UBERON:0005174,8.88e-10,6;UBERON:0001137,8.88e-10,6;UBERON:0002619,2.05e-09,17;UBERON:0001948,3.25e-08,5;UBERON:0002315,3.25e-08,5;UBERON:0002950,7.23e-08,4;UBERON:0001891,7.23e-08,4;UBERON:0009616,7.23e-08,4;UBERON:0010286,7.23e-08,4;UBERON:0002021,3.33e-07,10;UBERON:0000411,3.33e-07,10;UBERON:0001950,3.33e-07,10;UBERON:0000483,6.16e-07,174;UBERON:0000119,9.73e-07,176 | |||
|phase1_expression=1.28119077683835,0,0,0.30246421130683,0,0.33575854382378,0,0,0,0,0,0.159544317990673,0,0.0874204024189974,0,0,0,0,0.548457734422955,0,1.61582251287033,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0.816677425049476,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0.439372365468944,0.388859798148567,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0,1.41621522601718,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0.384218305321555,1.34796496001021,0.945041568321835,1.05162480675691,2.28520787523043,1.76694832761291,1.95985278743926,1.24599112323707,0.919218786610021,0,3.31987079021488,4.45458946443106,2.2420668914133,1.9212405156506,1.56274011167028,4.74611098302348,4.50210088025344,3.66715794664344,2.06240009831567,2.84743361598206,2.05039390407831,0.151452386666368,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0,0,0.842666520790511,0,0,0.35333957451034,1.12674735821344,0,0,0,0.432982082022428,0,0.505524445014783,0.45673551887624,0.258937883647172,0.742210695324124,0.520455980298408,0.304465478312141,0,0.301445281105245,0.352766121407114,0.502666365318702,0.247194967734374,0.144599356919912,0,0.161766849947409,0.662524555381181,0,0,2.34224637609238,1.46612694769419,0.255457055208591,0,0.599902730993408,0.127070227073065,2.54644086988199,0.915001205637253,3.14135880282161,2.9550134432687,1.53429274398198,3.32460871295296,1.94689515681309,0.611036183101898,0.248813941220186,0.252722758433675,0.210441855886474,0.520481771850815,0.689706313300419,1.0803727788321,0.150704817835715,0.680364991513279,0.640568601424249,1.12442069471675,0.776110112217047,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.710234206755631,0.983821158737019,0.462801338662135,0.697601834251224,0.268273401399619,0.817357396570186,0.658239399653922,1.14917224855367,1.37816976227955,0.438599962275997,1.09775057645525,0.536825675041487,2.52347938276953,2.98423375899925,0.660837565967596,0,0.213288250535234,0.232236671860439,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.203651327845314,0.387904974335251,0,0.379419222745544,0.295220295959204,0.156998727841375,0.123397163921801,0.592905254174298,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0,0.315270288212382,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,4.81651769963376,2.22702204525186,0.327869890753351,1.51482556322624,0.631016438832513,0,0.430846795465598,0,0,0,0,0,0.395287777946524,1.92792789853084,0.283880170416537,0.712262414669021,0.488660878060728,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.307435147943927,0,1.09060118843252,0,0.316036757935816,0,0,1.36175842301515,0.36012218806262,0.129358683782755,0.428674070063185,0.709360934569094,0.178368817602071,0.329098041204242,1.2178597964584,0,0.63549621259146,0,1.48397627647332,0.161464426695906,0.180938774784468,0.358117032009409,0,0.291480836629851,3.52308073819968,0.170870880797853,0,0.370389054739423,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0.949007980743406,0.813277868507395,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,0,0.259229946583586,0.621339313086926,13.5286305284206,0.299033092087958,0,0.194451188344048,0.258319646955462,0.506868376472335,0.352071715937262,0.2604087696879,1.04859344425711,5.79801889982414,9.79302021276743,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0.596044064343795,0.360586348559907,0.147689527174577,0.605798699688886,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0.350630706544707,0.453460767230423,0,0.269141569828427,0,0.579568782096571,0,0,0.214368379079066,1.50471631210609,2.82375921308533,0.920650473014354,0.572895513439397,0.859265911718438,4.7955776383945,1.5107877947794,1.35004500046361,2.2516060161211,2.26571204492102,2.07104124700728,0.62272408550506,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.640251524048693,0.574354689556133,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.735994600671987,0,0,0.715308569841963,0.581385666529314,0.470546902076653,0.592302255241736,0.914639864363863,0,0.271608227691724,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,1.08455788830176,0.385813221962283,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Aktip | |||
}} |
Revision as of 08:15, 4 August 2015
Short description: | p2@Aktip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aktip_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000125257_5end |
EntrezGene: | 14339 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.19e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.19e-23 | 23 |
neuron | 6.01e-16 | 33 |
neuronal stem cell | 6.01e-16 | 33 |
neuroblast | 6.01e-16 | 33 |
electrically signaling cell | 6.01e-16 | 33 |
electrically responsive cell | 1.32e-12 | 39 |
electrically active cell | 1.32e-12 | 39 |
ectodermal cell | 1.15e-11 | 44 |
neurectodermal cell | 1.15e-11 | 44 |
neural cell | 6.55e-11 | 43 |