FFCP PHASE1:Mm9::chr6:119280611..119280625,-: Difference between revisions
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{{FFCP|EntrezGene=211187|HGNC=|UniProt=Q8BGX3|association_with_transcript=71bp_to_ENSMUST00000112756_5end|description=CAGE_peak_2_at_Lrtm2_5end|id=chr6:119280611..119280625,-|ontology_enrichment_celltype=CL:0000117!7.75e-11!23;CL:0000337!7.75e-11!23;CL:0000221!6.13e-09!44;CL:0000133!6.13e-09!44;CL:0002319!1.51e-08!43|ontology_enrichment_celltype_v019_2=CL:0002319,1.45e-12,43;CL:0000117,2.27e-12,23;CL:0000337,2.27e-12,23;CL:0000221,3.79e-12,44;CL:0000133,3.79e-12,44;CL:0000540,1.57e-08,33;CL:0000047,1.57e-08,33;CL:0000031,1.57e-08,33;CL:0000404,1.57e-08,33;CL:0000128,4.68e-07,6;CL:0000126,4.68e-07,6;CL:0000127,4.68e-07,6;CL:0002453,5.91e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.01e-26!63;UBERON:0001017!8.44e-23!73;UBERON:0005743!8.44e-23!73;UBERON:0000073!3.28e-22!75;UBERON:0001016!3.28e-22!75;UBERON:0001049!1.82e-21!52;UBERON:0005068!1.82e-21!52;UBERON:0006241!1.82e-21!52;UBERON:0007135!1.82e-21!52;UBERON:0004121!4.12e-21!102;UBERON:0000924!4.12e-21!102;UBERON:0006601!4.12e-21!102;UBERON:0002346!1.52e-20!71;UBERON:0003075!1.52e-20!71;UBERON:0007284!1.52e-20!71;UBERON:0000955!2.85e-20!50;UBERON:0006238!2.85e-20!50;UBERON:0003056!6.09e-20!49;UBERON:0002616!1.98e-19!49;UBERON:0002020!4.52e-18!34;UBERON:0002791!1.85e-14!29;UBERON:0003528!1.85e-14!29;UBERON:0001893!1.85e-14!29;UBERON:0003080!3.55e-14!40;UBERON:0007811!1.47e-13!86;UBERON:0002780!1.99e-13!39;UBERON:0001890!1.99e-13!39;UBERON:0006240!1.99e-13!39;UBERON:0000153!1.09e-10!94;UBERON:0002619!1.18e-09!17;UBERON:0000956!1.94e-09!21;UBERON:0001869!1.94e-09!21;UBERON:0000203!1.94e-09!21;UBERON:0003076!2.78e-08!12;UBERON:0003057!2.78e-08!12;UBERON:0002021!9.61e-08!10;UBERON:0000411!9.61e-08!10;UBERON:0001950!9.61e-08!10;UBERON:0000970!5.13e-07!9;UBERON:0000019!5.13e-07!9;UBERON:0000047!5.13e-07!9;UBERON:0004088!5.13e-07!9;UBERON:0002104!5.13e-07!9;UBERON:0001456!5.13e-07!9;UBERON:0003072!5.13e-07!9;UBERON:0003071!5.13e-07!9;UBERON:0004128!5.13e-07!9;UBERON:0000020!7.27e-07!12;UBERON:0001032!7.27e-07!12;UBERON:0004456!7.27e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.84e-38,95;UBERON:0000924,1.84e-38,95;UBERON:0006601,1.84e-38,95;UBERON:0002346,1.37e-36,64;UBERON:0003075,1.37e-36,64;UBERON:0007284,1.37e-36,64;UBERON:0001017,5.66e-36,73;UBERON:0001016,1.05e-34,75;UBERON:0000073,8.63e-34,54;UBERON:0010371,2.85e-32,73;UBERON:0001049,9.56e-31,52;UBERON:0005068,9.56e-31,52;UBERON:0006241,9.56e-31,52;UBERON:0007135,9.56e-31,52;UBERON:0002020,2.98e-25,34;UBERON:0003056,1.99e-24,49;UBERON:0000955,2.04e-24,47;UBERON:0006238,2.04e-24,47;UBERON:0010314,2.84e-23,92;UBERON:0002616,5.60e-23,46;UBERON:0003528,1.16e-18,29;UBERON:0002791,1.16e-18,29;UBERON:0001893,1.16e-18,29;UBERON:0003080,3.31e-17,40;UBERON:0002780,6.11e-16,39;UBERON:0001890,6.11e-16,39;UBERON:0006240,6.11e-16,39;UBERON:0003076,1.46e-15,12;UBERON:0003057,1.46e-15,12;UBERON:0002619,1.01e-12,17;UBERON:0002021,1.64e-11,10;UBERON:0000411,1.64e-11,10;UBERON:0001950,1.64e-11,10;UBERON:0000956,2.72e-11,21;UBERON:0001869,2.72e-11,21;UBERON:0000203,2.72e-11,21;UBERON:0000025,1.88e-10,114;UBERON:0004111,7.64e-10,122;UBERON:0002240,1.08e-09,6;UBERON:0005174,1.08e-09,6;UBERON:0001137,1.08e-09,6;UBERON:0002420,5.01e-09,8;UBERON:0007245,5.01e-09,8;UBERON:0010009,5.01e-09,8;UBERON:0010011,5.01e-09,8;UBERON:0000454,5.01e-09,8;UBERON:0000970,2.10e-08,9;UBERON:0000019,2.10e-08,9;UBERON:0000047,2.10e-08,9;UBERON:0010312,2.10e-08,9;UBERON:0004088,2.10e-08,9;UBERON:0002104,2.10e-08,9;UBERON:0001456,2.10e-08,9;UBERON:0003072,2.10e-08,9;UBERON:0004128,2.10e-08,9;UBERON:0003071,2.10e-08,9;UBERON:0001948,2.10e-08,5;UBERON:0002315,2.10e-08,5;UBERON:0000483,2.24e-08,174;UBERON:0000119,3.73e-08,176;UBERON:0011216,1.36e-07,194;UBERON:0000020,1.71e-07,12;UBERON:0001032,1.71e-07,12;UBERON:0004456,1.71e-07,12;UBERON:0004733,1.81e-07,6;UBERON:0004732,1.81e-07,6;UBERON:0002028,1.81e-07,6;UBERON:0007277,1.81e-07,6;UBERON:0002950,2.52e-07,4;UBERON:0001891,2.52e-07,4;UBERON:0009616,2.52e-07,4;UBERON:0010286,2.52e-07,4;UBERON:0000033,8.41e-07,13;UBERON:0005085,8.41e-07,13|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.171635164729,2.85592037554813,2.13872888981712,3.07970127575798,11.5002051491977,0,0,0,0,0,0.515672092277442,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0.299600110518405,1.92109152660777,0.207379224616955,0.270011876663381,0,5.42736870367227,4.8591079009355,0.489963196859816,0.670918297127655,0,2.20231761998777,8.2996769755372,9.36999852863085,0.923204014111357,2.28719109006024,1.56274011167028,2.79182999001381,3.93933827022176,5.50073691996516,4.41942878210502,4.27115042397309,1.67759501242771,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0.432982082022428,0,0,0.5709193985953,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0.161766849947409,0,0,0,5.27005434620785,3.97948742945565,0,0,0,0,6.14141621559773,4.57500602818627,3.26701315493447,2.08589184230732,5.37002460393694,9.3504620051802,7.46309810111685,0,0,0,0.841767423545896,0.520481771850815,1.37941262660084,3.42118046630164,2.56198190320716,6.93972291343544,5.25266253167884,5.24729657534481,6.72628763921441,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.350296027101508,0,0,0,0,0,0,2.52347938276953,2.6755199218614,0,0,0,0.696710015581316,0,0.403367049246685,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0.252946148497029,0.295220295959204,0.31399745568275,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,2.58654466233247,0,0,0,0,0,0,0.195133647857799,0.788175720530955,0.664394068946325,0.956728611944923,1.3109065177259,0.518054945597687,0.578596234326046,0,0,0,0,3.85321415970701,4.92289083687253,0,0.252470927204373,0,0,0,0,0,0,0,0,0,7.06906896127976,0.283880170416537,0,0,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0.203319467126849,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.563047426353546,0.549454872801795,0.214368379079066,0,3.3885110557024,0.920650473014354,4.01026859407578,2.57779773515531,6.16574267793578,3.0215755895588,2.70009000092722,3.60256962579376,2.71885445390523,2.07104124700728,0,0,0.512200817262403,0.243106717068294,0,0,0.888986911206461,0.824140228955577,0.320919209591815,0.252697211763798,0.25347929989024,0.943131706930381,0,0.512201219238954,0.114870937911227,0,0.579421629724277,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.338458431566706,0,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.689531376628944,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.701794825336225,0.859484216193193,0.382576664137687,0.661774257358546,0.231867835620421|short_description=p2@Lrtm2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:211187 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BGX3 | |||
|association_with_transcript=71bp_to_ENSMUST00000112756_5end | |||
|cluster_id=chr6:119280611..119280625,- | |||
|description=CAGE_peak_2_at_Lrtm2_5end | |||
|id=chr6:119280611..119280625,- | |||
|ontology_enrichment_celltype=CL:0000117!7.75e-11!23;CL:0000337!7.75e-11!23;CL:0000221!6.13e-09!44;CL:0000133!6.13e-09!44;CL:0002319!1.51e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.45e-12,43;CL:0000117,2.27e-12,23;CL:0000337,2.27e-12,23;CL:0000221,3.79e-12,44;CL:0000133,3.79e-12,44;CL:0000540,1.57e-08,33;CL:0000047,1.57e-08,33;CL:0000031,1.57e-08,33;CL:0000404,1.57e-08,33;CL:0000128,4.68e-07,6;CL:0000126,4.68e-07,6;CL:0000127,4.68e-07,6;CL:0002453,5.91e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.01e-26!63;UBERON:0001017!8.44e-23!73;UBERON:0005743!8.44e-23!73;UBERON:0000073!3.28e-22!75;UBERON:0001016!3.28e-22!75;UBERON:0001049!1.82e-21!52;UBERON:0005068!1.82e-21!52;UBERON:0006241!1.82e-21!52;UBERON:0007135!1.82e-21!52;UBERON:0004121!4.12e-21!102;UBERON:0000924!4.12e-21!102;UBERON:0006601!4.12e-21!102;UBERON:0002346!1.52e-20!71;UBERON:0003075!1.52e-20!71;UBERON:0007284!1.52e-20!71;UBERON:0000955!2.85e-20!50;UBERON:0006238!2.85e-20!50;UBERON:0003056!6.09e-20!49;UBERON:0002616!1.98e-19!49;UBERON:0002020!4.52e-18!34;UBERON:0002791!1.85e-14!29;UBERON:0003528!1.85e-14!29;UBERON:0001893!1.85e-14!29;UBERON:0003080!3.55e-14!40;UBERON:0007811!1.47e-13!86;UBERON:0002780!1.99e-13!39;UBERON:0001890!1.99e-13!39;UBERON:0006240!1.99e-13!39;UBERON:0000153!1.09e-10!94;UBERON:0002619!1.18e-09!17;UBERON:0000956!1.94e-09!21;UBERON:0001869!1.94e-09!21;UBERON:0000203!1.94e-09!21;UBERON:0003076!2.78e-08!12;UBERON:0003057!2.78e-08!12;UBERON:0002021!9.61e-08!10;UBERON:0000411!9.61e-08!10;UBERON:0001950!9.61e-08!10;UBERON:0000970!5.13e-07!9;UBERON:0000019!5.13e-07!9;UBERON:0000047!5.13e-07!9;UBERON:0004088!5.13e-07!9;UBERON:0002104!5.13e-07!9;UBERON:0001456!5.13e-07!9;UBERON:0003072!5.13e-07!9;UBERON:0003071!5.13e-07!9;UBERON:0004128!5.13e-07!9;UBERON:0000020!7.27e-07!12;UBERON:0001032!7.27e-07!12;UBERON:0004456!7.27e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.84e-38,95;UBERON:0000924,1.84e-38,95;UBERON:0006601,1.84e-38,95;UBERON:0002346,1.37e-36,64;UBERON:0003075,1.37e-36,64;UBERON:0007284,1.37e-36,64;UBERON:0001017,5.66e-36,73;UBERON:0001016,1.05e-34,75;UBERON:0000073,8.63e-34,54;UBERON:0010371,2.85e-32,73;UBERON:0001049,9.56e-31,52;UBERON:0005068,9.56e-31,52;UBERON:0006241,9.56e-31,52;UBERON:0007135,9.56e-31,52;UBERON:0002020,2.98e-25,34;UBERON:0003056,1.99e-24,49;UBERON:0000955,2.04e-24,47;UBERON:0006238,2.04e-24,47;UBERON:0010314,2.84e-23,92;UBERON:0002616,5.60e-23,46;UBERON:0003528,1.16e-18,29;UBERON:0002791,1.16e-18,29;UBERON:0001893,1.16e-18,29;UBERON:0003080,3.31e-17,40;UBERON:0002780,6.11e-16,39;UBERON:0001890,6.11e-16,39;UBERON:0006240,6.11e-16,39;UBERON:0003076,1.46e-15,12;UBERON:0003057,1.46e-15,12;UBERON:0002619,1.01e-12,17;UBERON:0002021,1.64e-11,10;UBERON:0000411,1.64e-11,10;UBERON:0001950,1.64e-11,10;UBERON:0000956,2.72e-11,21;UBERON:0001869,2.72e-11,21;UBERON:0000203,2.72e-11,21;UBERON:0000025,1.88e-10,114;UBERON:0004111,7.64e-10,122;UBERON:0002240,1.08e-09,6;UBERON:0005174,1.08e-09,6;UBERON:0001137,1.08e-09,6;UBERON:0002420,5.01e-09,8;UBERON:0007245,5.01e-09,8;UBERON:0010009,5.01e-09,8;UBERON:0010011,5.01e-09,8;UBERON:0000454,5.01e-09,8;UBERON:0000970,2.10e-08,9;UBERON:0000019,2.10e-08,9;UBERON:0000047,2.10e-08,9;UBERON:0010312,2.10e-08,9;UBERON:0004088,2.10e-08,9;UBERON:0002104,2.10e-08,9;UBERON:0001456,2.10e-08,9;UBERON:0003072,2.10e-08,9;UBERON:0004128,2.10e-08,9;UBERON:0003071,2.10e-08,9;UBERON:0001948,2.10e-08,5;UBERON:0002315,2.10e-08,5;UBERON:0000483,2.24e-08,174;UBERON:0000119,3.73e-08,176;UBERON:0011216,1.36e-07,194;UBERON:0000020,1.71e-07,12;UBERON:0001032,1.71e-07,12;UBERON:0004456,1.71e-07,12;UBERON:0004733,1.81e-07,6;UBERON:0004732,1.81e-07,6;UBERON:0002028,1.81e-07,6;UBERON:0007277,1.81e-07,6;UBERON:0002950,2.52e-07,4;UBERON:0001891,2.52e-07,4;UBERON:0009616,2.52e-07,4;UBERON:0010286,2.52e-07,4;UBERON:0000033,8.41e-07,13;UBERON:0005085,8.41e-07,13 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.171635164729,2.85592037554813,2.13872888981712,3.07970127575798,11.5002051491977,0,0,0,0,0,0.515672092277442,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0.299600110518405,1.92109152660777,0.207379224616955,0.270011876663381,0,5.42736870367227,4.8591079009355,0.489963196859816,0.670918297127655,0,2.20231761998777,8.2996769755372,9.36999852863085,0.923204014111357,2.28719109006024,1.56274011167028,2.79182999001381,3.93933827022176,5.50073691996516,4.41942878210502,4.27115042397309,1.67759501242771,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0.432982082022428,0,0,0.5709193985953,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0.161766849947409,0,0,0,5.27005434620785,3.97948742945565,0,0,0,0,6.14141621559773,4.57500602818627,3.26701315493447,2.08589184230732,5.37002460393694,9.3504620051802,7.46309810111685,0,0,0,0.841767423545896,0.520481771850815,1.37941262660084,3.42118046630164,2.56198190320716,6.93972291343544,5.25266253167884,5.24729657534481,6.72628763921441,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.350296027101508,0,0,0,0,0,0,2.52347938276953,2.6755199218614,0,0,0,0.696710015581316,0,0.403367049246685,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0.252946148497029,0.295220295959204,0.31399745568275,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,2.58654466233247,0,0,0,0,0,0,0.195133647857799,0.788175720530955,0.664394068946325,0.956728611944923,1.3109065177259,0.518054945597687,0.578596234326046,0,0,0,0,3.85321415970701,4.92289083687253,0,0.252470927204373,0,0,0,0,0,0,0,0,0,7.06906896127976,0.283880170416537,0,0,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0.203319467126849,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.563047426353546,0.549454872801795,0.214368379079066,0,3.3885110557024,0.920650473014354,4.01026859407578,2.57779773515531,6.16574267793578,3.0215755895588,2.70009000092722,3.60256962579376,2.71885445390523,2.07104124700728,0,0,0.512200817262403,0.243106717068294,0,0,0.888986911206461,0.824140228955577,0.320919209591815,0.252697211763798,0.25347929989024,0.943131706930381,0,0.512201219238954,0.114870937911227,0,0.579421629724277,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.338458431566706,0,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.689531376628944,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.701794825336225,0.859484216193193,0.382576664137687,0.661774257358546,0.231867835620421 | |||
|short_description=p2@Lrtm2 | |||
}} |
Revision as of 00:20, 5 August 2015
Short description: | p2@Lrtm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lrtm2_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_ENSMUST00000112756_5end |
EntrezGene: | 211187 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.45e-12 | 43 |
CNS neuron (sensu Vertebrata) | 2.27e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.27e-12 | 23 |
ectodermal cell | 3.79e-12 | 44 |
neurectodermal cell | 3.79e-12 | 44 |
neuron | 1.57e-08 | 33 |
neuronal stem cell | 1.57e-08 | 33 |
neuroblast | 1.57e-08 | 33 |
electrically signaling cell | 1.57e-08 | 33 |
oligodendrocyte | 4.68e-07 | 6 |
macroglial cell | 4.68e-07 | 6 |
astrocyte | 4.68e-07 | 6 |
oligodendrocyte precursor cell | 5.91e-07 | 8 |