FFCP PHASE1:Mm9::chr7:31220215..31220234,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=168|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:31220215..31220234,-|id=chr7:31220215..31220234,-|ontology_enrichment_celltype=CL:0000117!1.51e-15!23;CL:0000337!1.51e-15!23;CL:0000221!2.87e-10!44;CL:0000133!2.87e-10!44;CL:0002319!3.75e-10!43;CL:0000540!5.68e-10!33;CL:0000047!5.68e-10!33;CL:0000031!5.68e-10!33;CL:0000404!5.68e-10!33;CL:0000393!2.13e-09!39;CL:0000211!2.13e-09!39;CL:0000055!2.35e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.49e-25,23;CL:0000337,1.49e-25,23;CL:0000540,4.00e-16,33;CL:0000047,4.00e-16,33;CL:0000031,4.00e-16,33;CL:0000404,4.00e-16,33;CL:0000393,3.63e-14,39;CL:0000211,3.63e-14,39;CL:0002319,2.32e-12,43;CL:0000221,5.92e-12,44;CL:0000133,5.92e-12,44;CL:0002614,8.15e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.27e-32!52;UBERON:0005068!1.27e-32!52;UBERON:0006241!1.27e-32!52;UBERON:0007135!1.27e-32!52;UBERON:0000073!1.13e-31!75;UBERON:0001016!1.13e-31!75;UBERON:0001017!1.46e-31!73;UBERON:0005743!1.46e-31!73;UBERON:0000955!2.31e-31!50;UBERON:0006238!2.31e-31!50;UBERON:0002616!1.69e-30!49;UBERON:0002346!2.01e-28!71;UBERON:0003075!2.01e-28!71;UBERON:0007284!2.01e-28!71;UBERON:0000033!2.55e-28!63;UBERON:0004121!1.99e-26!102;UBERON:0000924!1.99e-26!102;UBERON:0006601!1.99e-26!102;UBERON:0003080!1.15e-25!40;UBERON:0003056!5.42e-25!49;UBERON:0002780!6.95e-25!39;UBERON:0001890!6.95e-25!39;UBERON:0006240!6.95e-25!39;UBERON:0002020!1.30e-23!34;UBERON:0002791!1.02e-19!29;UBERON:0003528!1.02e-19!29;UBERON:0001893!1.02e-19!29;UBERON:0007811!6.31e-16!86;UBERON:0000956!2.59e-15!21;UBERON:0001869!2.59e-15!21;UBERON:0000203!2.59e-15!21;UBERON:0000153!5.12e-14!94;UBERON:0002619!8.80e-13!17;UBERON:0000025!6.69e-10!114;UBERON:0002021!1.11e-09!10;UBERON:0000411!1.11e-09!10;UBERON:0001950!1.11e-09!10;UBERON:0004111!8.58e-09!122;UBERON:0003076!2.70e-07!12;UBERON:0003057!2.70e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.68e-49,54;UBERON:0001017,2.07e-45,73;UBERON:0001049,4.95e-45,52;UBERON:0005068,4.95e-45,52;UBERON:0006241,4.95e-45,52;UBERON:0007135,4.95e-45,52;UBERON:0001016,6.81e-44,75;UBERON:0002020,1.50e-37,34;UBERON:0000955,1.83e-37,47;UBERON:0006238,1.83e-37,47;UBERON:0002616,6.34e-36,46;UBERON:0003080,1.03e-34,40;UBERON:0002346,1.26e-34,64;UBERON:0003075,1.26e-34,64;UBERON:0007284,1.26e-34,64;UBERON:0002780,2.96e-33,39;UBERON:0001890,2.96e-33,39;UBERON:0006240,2.96e-33,39;UBERON:0004121,3.12e-32,95;UBERON:0000924,3.12e-32,95;UBERON:0006601,3.12e-32,95;UBERON:0003528,5.89e-30,29;UBERON:0002791,5.89e-30,29;UBERON:0001893,5.89e-30,29;UBERON:0010371,4.51e-29,73;UBERON:0003056,9.39e-27,49;UBERON:0010314,3.71e-22,92;UBERON:0000956,1.52e-20,21;UBERON:0001869,1.52e-20,21;UBERON:0000203,1.52e-20,21;UBERON:0002021,7.07e-18,10;UBERON:0000411,7.07e-18,10;UBERON:0001950,7.07e-18,10;UBERON:0000025,7.30e-16,114;UBERON:0002619,1.25e-15,17;UBERON:0004111,3.83e-14,122;UBERON:0011216,4.04e-13,194;UBERON:0002420,2.03e-10,8;UBERON:0007245,2.03e-10,8;UBERON:0010009,2.03e-10,8;UBERON:0010011,2.03e-10,8;UBERON:0000454,2.03e-10,8;UBERON:0003076,4.51e-10,12;UBERON:0003057,4.51e-10,12;UBERON:0002240,5.19e-10,6;UBERON:0005174,5.19e-10,6;UBERON:0001137,5.19e-10,6;UBERON:0001948,1.07e-08,5;UBERON:0002315,1.07e-08,5;UBERON:0002950,3.53e-08,4;UBERON:0001891,3.53e-08,4;UBERON:0009616,3.53e-08,4;UBERON:0010286,3.53e-08,4;UBERON:0000483,6.65e-07,174;UBERON:0002038,8.15e-07,3;UBERON:0009663,8.15e-07,3;UBERON:0009661,8.15e-07,3;UBERON:0000125,8.15e-07,3;UBERON:0002308,8.15e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0.659058548203415,0.194429899074283,0,0,0,0,0,0,0.573066879877513,1.03134418455488,1.01158230429799,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,1.15265491596466,1.24427534770173,1.62007125998029,1.05162480675691,1.42825492201902,3.53389665522582,0.61245399607477,1.62937300731002,0.919218786610021,4.40463523997555,4.08599481872601,5.22262213071228,1.58263545276233,3.47653045689157,0,6.42120897703176,4.50210088025344,4.88954392885792,4.41942878210502,2.42031857358475,1.67759501242771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0.150722640552623,0.587943535678524,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.878342391034642,13.6140359428746,0.510914110417183,0,0,0,1.9472783122627,1.37250180845588,2.1361239859187,3.30266208365325,2.30143911597297,2.0778804455956,1.94689515681309,0,0,0,0.631325567659422,0,0,0,0.150704817835715,0.272145996605311,0.384341160854549,0.655912071918102,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0,0.36012412292203,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.89260953707715,1.13195073617213,0.660837565967596,0,0,0.232236671860439,0,0.403367049246685,0,0.380451252225118,1.42358718463353,0.329397909448022,0,0,0,1.79763881730844,0.648414149624083,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,1.44495530989013,1.17211686592203,0,0,0,0,0.430846795465598,0,0,0,0,0.876767573733936,0,2.57057053137446,0,0.35613120733451,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.646793418913773,1.07168517515796,0.177340233642274,0.713475270408282,1.48094118541909,2.13125464380219,0,0.21183207086382,0.220528398054962,0,0.161464426695906,0,0,0,1.45740418314925,1.8542530201051,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.179427713218951,0,0,0,0.183151624267265,0,0,6.7770221114048,4.60325236507177,4.58316410751517,9.96748457593388,1.37016503954128,5.2877572817279,3.37511250115903,3.60256962579376,3.62513927187364,4.14208249401456,0.103787347584177,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.34461281373368,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0,0,0,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0,1.49886346762768,0.233931608445408,0.859484216193193,0,0,0|short_description=p@chr7:31220215..31220234,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:31220215..31220234,- | |||
|description=CAGE_peak_at_chr7:31220215..31220234,- | |||
|id=chr7:31220215..31220234,- | |||
|ontology_enrichment_celltype=CL:0000117!1.51e-15!23;CL:0000337!1.51e-15!23;CL:0000221!2.87e-10!44;CL:0000133!2.87e-10!44;CL:0002319!3.75e-10!43;CL:0000540!5.68e-10!33;CL:0000047!5.68e-10!33;CL:0000031!5.68e-10!33;CL:0000404!5.68e-10!33;CL:0000393!2.13e-09!39;CL:0000211!2.13e-09!39;CL:0000055!2.35e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.49e-25,23;CL:0000337,1.49e-25,23;CL:0000540,4.00e-16,33;CL:0000047,4.00e-16,33;CL:0000031,4.00e-16,33;CL:0000404,4.00e-16,33;CL:0000393,3.63e-14,39;CL:0000211,3.63e-14,39;CL:0002319,2.32e-12,43;CL:0000221,5.92e-12,44;CL:0000133,5.92e-12,44;CL:0002614,8.15e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.27e-32!52;UBERON:0005068!1.27e-32!52;UBERON:0006241!1.27e-32!52;UBERON:0007135!1.27e-32!52;UBERON:0000073!1.13e-31!75;UBERON:0001016!1.13e-31!75;UBERON:0001017!1.46e-31!73;UBERON:0005743!1.46e-31!73;UBERON:0000955!2.31e-31!50;UBERON:0006238!2.31e-31!50;UBERON:0002616!1.69e-30!49;UBERON:0002346!2.01e-28!71;UBERON:0003075!2.01e-28!71;UBERON:0007284!2.01e-28!71;UBERON:0000033!2.55e-28!63;UBERON:0004121!1.99e-26!102;UBERON:0000924!1.99e-26!102;UBERON:0006601!1.99e-26!102;UBERON:0003080!1.15e-25!40;UBERON:0003056!5.42e-25!49;UBERON:0002780!6.95e-25!39;UBERON:0001890!6.95e-25!39;UBERON:0006240!6.95e-25!39;UBERON:0002020!1.30e-23!34;UBERON:0002791!1.02e-19!29;UBERON:0003528!1.02e-19!29;UBERON:0001893!1.02e-19!29;UBERON:0007811!6.31e-16!86;UBERON:0000956!2.59e-15!21;UBERON:0001869!2.59e-15!21;UBERON:0000203!2.59e-15!21;UBERON:0000153!5.12e-14!94;UBERON:0002619!8.80e-13!17;UBERON:0000025!6.69e-10!114;UBERON:0002021!1.11e-09!10;UBERON:0000411!1.11e-09!10;UBERON:0001950!1.11e-09!10;UBERON:0004111!8.58e-09!122;UBERON:0003076!2.70e-07!12;UBERON:0003057!2.70e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.68e-49,54;UBERON:0001017,2.07e-45,73;UBERON:0001049,4.95e-45,52;UBERON:0005068,4.95e-45,52;UBERON:0006241,4.95e-45,52;UBERON:0007135,4.95e-45,52;UBERON:0001016,6.81e-44,75;UBERON:0002020,1.50e-37,34;UBERON:0000955,1.83e-37,47;UBERON:0006238,1.83e-37,47;UBERON:0002616,6.34e-36,46;UBERON:0003080,1.03e-34,40;UBERON:0002346,1.26e-34,64;UBERON:0003075,1.26e-34,64;UBERON:0007284,1.26e-34,64;UBERON:0002780,2.96e-33,39;UBERON:0001890,2.96e-33,39;UBERON:0006240,2.96e-33,39;UBERON:0004121,3.12e-32,95;UBERON:0000924,3.12e-32,95;UBERON:0006601,3.12e-32,95;UBERON:0003528,5.89e-30,29;UBERON:0002791,5.89e-30,29;UBERON:0001893,5.89e-30,29;UBERON:0010371,4.51e-29,73;UBERON:0003056,9.39e-27,49;UBERON:0010314,3.71e-22,92;UBERON:0000956,1.52e-20,21;UBERON:0001869,1.52e-20,21;UBERON:0000203,1.52e-20,21;UBERON:0002021,7.07e-18,10;UBERON:0000411,7.07e-18,10;UBERON:0001950,7.07e-18,10;UBERON:0000025,7.30e-16,114;UBERON:0002619,1.25e-15,17;UBERON:0004111,3.83e-14,122;UBERON:0011216,4.04e-13,194;UBERON:0002420,2.03e-10,8;UBERON:0007245,2.03e-10,8;UBERON:0010009,2.03e-10,8;UBERON:0010011,2.03e-10,8;UBERON:0000454,2.03e-10,8;UBERON:0003076,4.51e-10,12;UBERON:0003057,4.51e-10,12;UBERON:0002240,5.19e-10,6;UBERON:0005174,5.19e-10,6;UBERON:0001137,5.19e-10,6;UBERON:0001948,1.07e-08,5;UBERON:0002315,1.07e-08,5;UBERON:0002950,3.53e-08,4;UBERON:0001891,3.53e-08,4;UBERON:0009616,3.53e-08,4;UBERON:0010286,3.53e-08,4;UBERON:0000483,6.65e-07,174;UBERON:0002038,8.15e-07,3;UBERON:0009663,8.15e-07,3;UBERON:0009661,8.15e-07,3;UBERON:0000125,8.15e-07,3;UBERON:0002308,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0.659058548203415,0.194429899074283,0,0,0,0,0,0,0.573066879877513,1.03134418455488,1.01158230429799,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,1.15265491596466,1.24427534770173,1.62007125998029,1.05162480675691,1.42825492201902,3.53389665522582,0.61245399607477,1.62937300731002,0.919218786610021,4.40463523997555,4.08599481872601,5.22262213071228,1.58263545276233,3.47653045689157,0,6.42120897703176,4.50210088025344,4.88954392885792,4.41942878210502,2.42031857358475,1.67759501242771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0.150722640552623,0.587943535678524,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0.878342391034642,13.6140359428746,0.510914110417183,0,0,0,1.9472783122627,1.37250180845588,2.1361239859187,3.30266208365325,2.30143911597297,2.0778804455956,1.94689515681309,0,0,0,0.631325567659422,0,0,0,0.150704817835715,0.272145996605311,0.384341160854549,0.655912071918102,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0,0.36012412292203,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.89260953707715,1.13195073617213,0.660837565967596,0,0,0.232236671860439,0,0.403367049246685,0,0.380451252225118,1.42358718463353,0.329397909448022,0,0,0,1.79763881730844,0.648414149624083,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,1.44495530989013,1.17211686592203,0,0,0,0,0.430846795465598,0,0,0,0,0.876767573733936,0,2.57057053137446,0,0.35613120733451,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.646793418913773,1.07168517515796,0.177340233642274,0.713475270408282,1.48094118541909,2.13125464380219,0,0.21183207086382,0.220528398054962,0,0.161464426695906,0,0,0,1.45740418314925,1.8542530201051,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.179427713218951,0,0,0,0.183151624267265,0,0,6.7770221114048,4.60325236507177,4.58316410751517,9.96748457593388,1.37016503954128,5.2877572817279,3.37511250115903,3.60256962579376,3.62513927187364,4.14208249401456,0.103787347584177,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.34461281373368,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0,0,0,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0,1.49886346762768,0.233931608445408,0.859484216193193,0,0,0 | |||
|short_description=p@chr7:31220215..31220234,- | |||
}} |
Latest revision as of 01:11, 5 August 2015
Short description: | p@chr7:31220215..31220234, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:31220215..31220234, - |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.49e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.49e-25 | 23 |
neuron | 4.00e-16 | 33 |
neuronal stem cell | 4.00e-16 | 33 |
neuroblast | 4.00e-16 | 33 |
electrically signaling cell | 4.00e-16 | 33 |
electrically responsive cell | 3.63e-14 | 39 |
electrically active cell | 3.63e-14 | 39 |
neural cell | 2.32e-12 | 43 |
ectodermal cell | 5.92e-12 | 44 |
neurectodermal cell | 5.92e-12 | 44 |
neuron of the substantia nigra | 8.15e-07 | 3 |