FFCP PHASE1:Mm9::chr17:8533273..8533315,+: Difference between revisions
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{{FFCP|EntrezGene=320111|HGNC=|MCL_coexpression_id=20|UniProt=Q6PAN7|association_with_transcript=2bp_to_ENSMUST00000069742,NR_028280,uc008ajo.1_5end|description=CAGE_peak_2_at_Prr18_5end|id=chr17:8533273..8533315,+|ontology_enrichment_celltype=CL:0000117!7.41e-18!23;CL:0000337!7.41e-18!23;CL:0000540!1.48e-12!33;CL:0000047!1.48e-12!33;CL:0000031!1.48e-12!33;CL:0000404!1.48e-12!33;CL:0000221!2.36e-10!44;CL:0000133!2.36e-10!44;CL:0002319!4.78e-10!43;CL:0000393!2.79e-09!39;CL:0000211!2.79e-09!39;CL:0000055!2.16e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-17,23;CL:0000337,1.09e-17,23;CL:0000540,8.07e-11,33;CL:0000047,8.07e-11,33;CL:0000031,8.07e-11,33;CL:0000404,8.07e-11,33;CL:0002319,4.41e-09,43;CL:0000221,9.27e-09,44;CL:0000133,9.27e-09,44;CL:0000393,1.97e-08,39;CL:0000211,1.97e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.08e-25!73;UBERON:0005743!2.08e-25!73;UBERON:0000073!4.63e-25!75;UBERON:0001016!4.63e-25!75;UBERON:0001049!4.79e-23!52;UBERON:0005068!4.79e-23!52;UBERON:0006241!4.79e-23!52;UBERON:0007135!4.79e-23!52;UBERON:0002020!1.00e-22!34;UBERON:0000955!4.42e-22!50;UBERON:0006238!4.42e-22!50;UBERON:0002616!3.23e-21!49;UBERON:0002791!5.05e-19!29;UBERON:0003528!5.05e-19!29;UBERON:0001893!5.05e-19!29;UBERON:0000033!3.02e-18!63;UBERON:0004121!4.65e-17!102;UBERON:0000924!4.65e-17!102;UBERON:0006601!4.65e-17!102;UBERON:0003080!3.39e-16!40;UBERON:0002346!2.25e-15!71;UBERON:0003075!2.25e-15!71;UBERON:0007284!2.25e-15!71;UBERON:0002780!2.67e-15!39;UBERON:0001890!2.67e-15!39;UBERON:0006240!2.67e-15!39;UBERON:0003056!3.54e-13!49;UBERON:0000956!1.83e-12!21;UBERON:0001869!1.83e-12!21;UBERON:0000203!1.83e-12!21;UBERON:0000025!8.64e-11!114;UBERON:0002619!4.21e-10!17;UBERON:0004111!6.28e-10!122;UBERON:0007811!2.17e-09!86;UBERON:0002021!6.08e-09!10;UBERON:0000411!6.08e-09!10;UBERON:0001950!6.08e-09!10;UBERON:0002048!4.48e-08!14;UBERON:0000117!4.48e-08!14;UBERON:0000171!4.48e-08!14;UBERON:0000170!4.48e-08!14;UBERON:0005597!4.48e-08!14;UBERON:0000118!4.48e-08!14;UBERON:0002420!6.43e-08!8;UBERON:0007245!6.43e-08!8;UBERON:0010009!6.43e-08!8;UBERON:0010011!6.43e-08!8;UBERON:0000454!6.43e-08!8;UBERON:0003076!1.42e-07!12;UBERON:0003057!1.42e-07!12;UBERON:0000153!1.82e-07!94;UBERON:0002298!1.82e-07!6;UBERON:0005153!7.29e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-32,73;UBERON:0000073,2.13e-32,54;UBERON:0001016,2.58e-31,75;UBERON:0001049,1.58e-29,52;UBERON:0005068,1.58e-29,52;UBERON:0006241,1.58e-29,52;UBERON:0007135,1.58e-29,52;UBERON:0002020,2.66e-26,34;UBERON:0000955,2.14e-25,47;UBERON:0006238,2.14e-25,47;UBERON:0002616,3.94e-24,46;UBERON:0002346,1.47e-23,64;UBERON:0003075,1.47e-23,64;UBERON:0007284,1.47e-23,64;UBERON:0004121,1.90e-23,95;UBERON:0000924,1.90e-23,95;UBERON:0006601,1.90e-23,95;UBERON:0003528,1.57e-22,29;UBERON:0002791,1.57e-22,29;UBERON:0001893,1.57e-22,29;UBERON:0003080,3.89e-20,40;UBERON:0010371,2.17e-19,73;UBERON:0002780,8.29e-19,39;UBERON:0001890,8.29e-19,39;UBERON:0006240,8.29e-19,39;UBERON:0000025,6.99e-18,114;UBERON:0003056,2.08e-16,49;UBERON:0004111,6.48e-16,122;UBERON:0000956,2.79e-14,21;UBERON:0001869,2.79e-14,21;UBERON:0000203,2.79e-14,21;UBERON:0002619,5.99e-14,17;UBERON:0002021,2.36e-13,10;UBERON:0000411,2.36e-13,10;UBERON:0001950,2.36e-13,10;UBERON:0010314,2.56e-13,92;UBERON:0011216,4.05e-11,194;UBERON:0003076,6.32e-10,12;UBERON:0003057,6.32e-10,12;UBERON:0002420,1.18e-09,8;UBERON:0007245,1.18e-09,8;UBERON:0010009,1.18e-09,8;UBERON:0010011,1.18e-09,8;UBERON:0000454,1.18e-09,8;UBERON:0002048,6.35e-08,14;UBERON:0000117,6.35e-08,14;UBERON:0000171,6.35e-08,14;UBERON:0000170,6.35e-08,14;UBERON:0005597,6.35e-08,14;UBERON:0000118,6.35e-08,14;UBERON:0002950,1.06e-07,4;UBERON:0001891,1.06e-07,4;UBERON:0009616,1.06e-07,4;UBERON:0010286,1.06e-07,4;UBERON:0000483,1.29e-07,174;UBERON:0000119,2.12e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.64495489636016,2.53532561402472,0,0,0,0,0,1.19840044207362,1.15265491596466,0.725827286159344,1.21505344498522,0.630974884054146,4.57041575046086,3.75476519617743,0.857435594504678,1.0543001812006,1.83843757322004,28.6301290598411,20.6853487698004,24.1162257212302,2.50583946687368,2.28719109006024,0.52091337055676,25.9640189071284,16.8828783009504,16.1966142643419,1.47314292736834,1.85083185038834,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.07620470735796,11.3101221679266,0,0,0,0,25.0150367806054,34.312545211397,3.26701315493447,10.7771078519211,6.39288643325826,29.7136903720171,21.415846724944,0,0,0,0.841767423545896,0,0,0,0,0,0,0,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4585567081041,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95605104266567,0,0.325929952884052,0.509235257325564,0.469380496577004,1.00503754465089,2.61848004974615,3.31727201358258,2.20689201748667,1.10732344824387,1.2756381492599,2.13022309130459,1.55416483679306,1.44649058581512,0,0,0,0.275936746304732,43.6697604766794,42.7822656061542,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0.395287777946524,5.14114106274891,1.13552068166615,0,0,2.47455184458803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.4688773146905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,1.03111909406213,6.85082519770642,9.82012066606611,7.42524750254986,4.05289082901798,3.17199686288943,4.14208249401456,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.222246727801615,1.23621034343337,0,0.758091635291392,1.01391719956096,0.754505365544305,0.280924522409647,0.512201219238954,0.459483751644906,0,0.115884325944855,0.77163688185482,0,0.294397840268795,0.685738504770831,0.532427418478012,0,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.543216455383447,0,0.355905054372522,0.591026894253381,0.409231043169689,0.154936841185966,0.578719832943424,1.49886346762768,0.701794825336225,0.429742108096597,0,0,0|short_description=p2@Prr18}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320111 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6PAN7 | |||
|association_with_transcript=2bp_to_ENSMUST00000069742,NR_028280,uc008ajo.1_5end | |||
|cluster_id=chr17:8533273..8533315,+ | |||
|description=CAGE_peak_2_at_Prr18_5end | |||
|id=chr17:8533273..8533315,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.41e-18!23;CL:0000337!7.41e-18!23;CL:0000540!1.48e-12!33;CL:0000047!1.48e-12!33;CL:0000031!1.48e-12!33;CL:0000404!1.48e-12!33;CL:0000221!2.36e-10!44;CL:0000133!2.36e-10!44;CL:0002319!4.78e-10!43;CL:0000393!2.79e-09!39;CL:0000211!2.79e-09!39;CL:0000055!2.16e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-17,23;CL:0000337,1.09e-17,23;CL:0000540,8.07e-11,33;CL:0000047,8.07e-11,33;CL:0000031,8.07e-11,33;CL:0000404,8.07e-11,33;CL:0002319,4.41e-09,43;CL:0000221,9.27e-09,44;CL:0000133,9.27e-09,44;CL:0000393,1.97e-08,39;CL:0000211,1.97e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.08e-25!73;UBERON:0005743!2.08e-25!73;UBERON:0000073!4.63e-25!75;UBERON:0001016!4.63e-25!75;UBERON:0001049!4.79e-23!52;UBERON:0005068!4.79e-23!52;UBERON:0006241!4.79e-23!52;UBERON:0007135!4.79e-23!52;UBERON:0002020!1.00e-22!34;UBERON:0000955!4.42e-22!50;UBERON:0006238!4.42e-22!50;UBERON:0002616!3.23e-21!49;UBERON:0002791!5.05e-19!29;UBERON:0003528!5.05e-19!29;UBERON:0001893!5.05e-19!29;UBERON:0000033!3.02e-18!63;UBERON:0004121!4.65e-17!102;UBERON:0000924!4.65e-17!102;UBERON:0006601!4.65e-17!102;UBERON:0003080!3.39e-16!40;UBERON:0002346!2.25e-15!71;UBERON:0003075!2.25e-15!71;UBERON:0007284!2.25e-15!71;UBERON:0002780!2.67e-15!39;UBERON:0001890!2.67e-15!39;UBERON:0006240!2.67e-15!39;UBERON:0003056!3.54e-13!49;UBERON:0000956!1.83e-12!21;UBERON:0001869!1.83e-12!21;UBERON:0000203!1.83e-12!21;UBERON:0000025!8.64e-11!114;UBERON:0002619!4.21e-10!17;UBERON:0004111!6.28e-10!122;UBERON:0007811!2.17e-09!86;UBERON:0002021!6.08e-09!10;UBERON:0000411!6.08e-09!10;UBERON:0001950!6.08e-09!10;UBERON:0002048!4.48e-08!14;UBERON:0000117!4.48e-08!14;UBERON:0000171!4.48e-08!14;UBERON:0000170!4.48e-08!14;UBERON:0005597!4.48e-08!14;UBERON:0000118!4.48e-08!14;UBERON:0002420!6.43e-08!8;UBERON:0007245!6.43e-08!8;UBERON:0010009!6.43e-08!8;UBERON:0010011!6.43e-08!8;UBERON:0000454!6.43e-08!8;UBERON:0003076!1.42e-07!12;UBERON:0003057!1.42e-07!12;UBERON:0000153!1.82e-07!94;UBERON:0002298!1.82e-07!6;UBERON:0005153!7.29e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-32,73;UBERON:0000073,2.13e-32,54;UBERON:0001016,2.58e-31,75;UBERON:0001049,1.58e-29,52;UBERON:0005068,1.58e-29,52;UBERON:0006241,1.58e-29,52;UBERON:0007135,1.58e-29,52;UBERON:0002020,2.66e-26,34;UBERON:0000955,2.14e-25,47;UBERON:0006238,2.14e-25,47;UBERON:0002616,3.94e-24,46;UBERON:0002346,1.47e-23,64;UBERON:0003075,1.47e-23,64;UBERON:0007284,1.47e-23,64;UBERON:0004121,1.90e-23,95;UBERON:0000924,1.90e-23,95;UBERON:0006601,1.90e-23,95;UBERON:0003528,1.57e-22,29;UBERON:0002791,1.57e-22,29;UBERON:0001893,1.57e-22,29;UBERON:0003080,3.89e-20,40;UBERON:0010371,2.17e-19,73;UBERON:0002780,8.29e-19,39;UBERON:0001890,8.29e-19,39;UBERON:0006240,8.29e-19,39;UBERON:0000025,6.99e-18,114;UBERON:0003056,2.08e-16,49;UBERON:0004111,6.48e-16,122;UBERON:0000956,2.79e-14,21;UBERON:0001869,2.79e-14,21;UBERON:0000203,2.79e-14,21;UBERON:0002619,5.99e-14,17;UBERON:0002021,2.36e-13,10;UBERON:0000411,2.36e-13,10;UBERON:0001950,2.36e-13,10;UBERON:0010314,2.56e-13,92;UBERON:0011216,4.05e-11,194;UBERON:0003076,6.32e-10,12;UBERON:0003057,6.32e-10,12;UBERON:0002420,1.18e-09,8;UBERON:0007245,1.18e-09,8;UBERON:0010009,1.18e-09,8;UBERON:0010011,1.18e-09,8;UBERON:0000454,1.18e-09,8;UBERON:0002048,6.35e-08,14;UBERON:0000117,6.35e-08,14;UBERON:0000171,6.35e-08,14;UBERON:0000170,6.35e-08,14;UBERON:0005597,6.35e-08,14;UBERON:0000118,6.35e-08,14;UBERON:0002950,1.06e-07,4;UBERON:0001891,1.06e-07,4;UBERON:0009616,1.06e-07,4;UBERON:0010286,1.06e-07,4;UBERON:0000483,1.29e-07,174;UBERON:0000119,2.12e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.64495489636016,2.53532561402472,0,0,0,0,0,1.19840044207362,1.15265491596466,0.725827286159344,1.21505344498522,0.630974884054146,4.57041575046086,3.75476519617743,0.857435594504678,1.0543001812006,1.83843757322004,28.6301290598411,20.6853487698004,24.1162257212302,2.50583946687368,2.28719109006024,0.52091337055676,25.9640189071284,16.8828783009504,16.1966142643419,1.47314292736834,1.85083185038834,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.07620470735796,11.3101221679266,0,0,0,0,25.0150367806054,34.312545211397,3.26701315493447,10.7771078519211,6.39288643325826,29.7136903720171,21.415846724944,0,0,0,0.841767423545896,0,0,0,0,0,0,0,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4585567081041,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95605104266567,0,0.325929952884052,0.509235257325564,0.469380496577004,1.00503754465089,2.61848004974615,3.31727201358258,2.20689201748667,1.10732344824387,1.2756381492599,2.13022309130459,1.55416483679306,1.44649058581512,0,0,0,0.275936746304732,43.6697604766794,42.7822656061542,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0.395287777946524,5.14114106274891,1.13552068166615,0,0,2.47455184458803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.4688773146905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,1.38097570952153,1.71868654031819,1.03111909406213,6.85082519770642,9.82012066606611,7.42524750254986,4.05289082901798,3.17199686288943,4.14208249401456,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.222246727801615,1.23621034343337,0,0.758091635291392,1.01391719956096,0.754505365544305,0.280924522409647,0.512201219238954,0.459483751644906,0,0.115884325944855,0.77163688185482,0,0.294397840268795,0.685738504770831,0.532427418478012,0,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.543216455383447,0,0.355905054372522,0.591026894253381,0.409231043169689,0.154936841185966,0.578719832943424,1.49886346762768,0.701794825336225,0.429742108096597,0,0,0 | |||
|short_description=p2@Prr18 | |||
}} |
Revision as of 10:37, 5 August 2015
Short description: | p2@Prr18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prr18_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 2bp_to_ENSMUST00000069742, NR_028280, uc008ajo.1_5end |
EntrezGene: | 320111 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.09e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-17 | 23 |
neuron | 8.07e-11 | 33 |
neuronal stem cell | 8.07e-11 | 33 |
neuroblast | 8.07e-11 | 33 |
electrically signaling cell | 8.07e-11 | 33 |
neural cell | 4.41e-09 | 43 |
ectodermal cell | 9.27e-09 | 44 |
neurectodermal cell | 9.27e-09 | 44 |
electrically responsive cell | 1.97e-08 | 39 |
electrically active cell | 1.97e-08 | 39 |