FFCP PHASE1:Mm9::chrX:158990505..158990544,-: Difference between revisions
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{{FFCP|EntrezGene=194590|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=0bp_to_ENSMUST00000155043_5end|description=CAGE_peak_4_at_Reps2_5end|id=chrX:158990505..158990544,-|ontology_enrichment_celltype=CL:0000117!3.77e-09!23;CL:0000337!3.77e-09!23;CL:0000540!5.75e-09!33;CL:0000047!5.75e-09!33;CL:0000031!5.75e-09!33;CL:0000404!5.75e-09!33;CL:0000393!8.58e-07!39;CL:0000211!8.58e-07!39|ontology_enrichment_celltype_v019_2=CL:0002610,3.21e-12,3;CL:0002614,1.13e-11,3;CL:0000117,4.89e-07,23;CL:0000337,4.89e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.25e-24!73;UBERON:0005743!1.25e-24!73;UBERON:0000073!1.35e-23!75;UBERON:0001016!1.35e-23!75;UBERON:0001049!1.61e-21!52;UBERON:0005068!1.61e-21!52;UBERON:0006241!1.61e-21!52;UBERON:0007135!1.61e-21!52;UBERON:0000955!3.57e-20!50;UBERON:0006238!3.57e-20!50;UBERON:0002616!3.36e-19!49;UBERON:0000033!2.98e-18!63;UBERON:0004121!3.59e-18!102;UBERON:0000924!3.59e-18!102;UBERON:0006601!3.59e-18!102;UBERON:0002020!2.98e-16!34;UBERON:0002346!9.21e-16!71;UBERON:0003075!9.21e-16!71;UBERON:0007284!9.21e-16!71;UBERON:0003080!4.60e-13!40;UBERON:0002021!2.06e-12!10;UBERON:0000411!2.06e-12!10;UBERON:0001950!2.06e-12!10;UBERON:0003056!3.28e-12!49;UBERON:0002780!4.87e-12!39;UBERON:0001890!4.87e-12!39;UBERON:0006240!4.87e-12!39;UBERON:0002791!7.56e-12!29;UBERON:0003528!7.56e-12!29;UBERON:0001893!7.56e-12!29;UBERON:0007811!2.06e-10!86;UBERON:0003076!6.74e-10!12;UBERON:0003057!6.74e-10!12;UBERON:0000153!2.39e-09!94;UBERON:0002298!2.50e-09!6;UBERON:0000956!3.88e-09!21;UBERON:0001869!3.88e-09!21;UBERON:0000203!3.88e-09!21;UBERON:0002619!6.05e-09!17;UBERON:0002240!1.39e-07!6;UBERON:0005174!1.39e-07!6;UBERON:0001137!1.39e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-31,54;UBERON:0001049,7.21e-27,52;UBERON:0005068,7.21e-27,52;UBERON:0006241,7.21e-27,52;UBERON:0007135,7.21e-27,52;UBERON:0002616,7.48e-25,46;UBERON:0001017,7.50e-25,73;UBERON:0000955,3.00e-24,47;UBERON:0006238,3.00e-24,47;UBERON:0001016,4.38e-24,75;UBERON:0002346,3.90e-21,64;UBERON:0003075,3.90e-21,64;UBERON:0007284,3.90e-21,64;UBERON:0004121,3.49e-18,95;UBERON:0000924,3.49e-18,95;UBERON:0006601,3.49e-18,95;UBERON:0010371,4.56e-18,73;UBERON:0003080,2.04e-17,40;UBERON:0002950,2.26e-15,4;UBERON:0001891,2.26e-15,4;UBERON:0009616,2.26e-15,4;UBERON:0010286,2.26e-15,4;UBERON:0003528,2.49e-15,29;UBERON:0002791,2.49e-15,29;UBERON:0001893,2.49e-15,29;UBERON:0002780,2.64e-15,39;UBERON:0001890,2.64e-15,39;UBERON:0006240,2.64e-15,39;UBERON:0002020,5.36e-15,34;UBERON:0003056,1.07e-13,49;UBERON:0010314,1.50e-13,92;UBERON:0004684,3.21e-12,3;UBERON:0002275,3.21e-12,3;UBERON:0002021,4.33e-12,10;UBERON:0000411,4.33e-12,10;UBERON:0001950,4.33e-12,10;UBERON:0002038,1.13e-11,3;UBERON:0009663,1.13e-11,3;UBERON:0009661,1.13e-11,3;UBERON:0000125,1.13e-11,3;UBERON:0002308,1.13e-11,3;UBERON:0003076,2.51e-10,12;UBERON:0003057,2.51e-10,12;UBERON:0000025,3.43e-10,114;UBERON:0004733,6.61e-10,6;UBERON:0004732,6.61e-10,6;UBERON:0002028,6.61e-10,6;UBERON:0007277,6.61e-10,6;UBERON:0000956,2.03e-09,21;UBERON:0001869,2.03e-09,21;UBERON:0000203,2.03e-09,21;UBERON:0004111,2.88e-09,122;UBERON:0002619,3.55e-09,17;UBERON:0001896,6.99e-09,2;UBERON:0002298,6.99e-09,2;UBERON:0005290,6.99e-09,2;UBERON:0010096,6.99e-09,2;UBERON:0002420,1.56e-07,8;UBERON:0007245,1.56e-07,8;UBERON:0010009,1.56e-07,8;UBERON:0010011,1.56e-07,8;UBERON:0000454,1.56e-07,8;UBERON:0011216,8.89e-07,194|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,1.14260393761521,0.441737081903227,0,0,0,8.8092704799511,8.55505165170758,10.752457327937,0,0.0914876436024097,0,3.90856198601933,7.31591393041184,5.19514042441154,0.589257170947335,0.711858403995515,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,10.9347166765521,5.03250663100489,0,1.73824320192276,1.27857728665165,10.389402227978,5.84068547043927,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.81931657357869,0,0,0,0,0,0.275936746304732,10.7568895291821,9.37693492737625,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,2.30162618253588,0.572895513439397,0.68741272937475,0.685082519770642,3.7769694869485,2.02506750069542,1.80128481289688,2.26571204492102,1.55328093525546,0.103787347584177,0,0,0,0,0,0,0.412070114477788,0,0.505394423527595,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0|short_description=p4@Reps2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:194590 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000155043_5end | |||
|cluster_id=chrX:158990505..158990544,- | |||
|description=CAGE_peak_4_at_Reps2_5end | |||
|id=chrX:158990505..158990544,- | |||
|ontology_enrichment_celltype=CL:0000117!3.77e-09!23;CL:0000337!3.77e-09!23;CL:0000540!5.75e-09!33;CL:0000047!5.75e-09!33;CL:0000031!5.75e-09!33;CL:0000404!5.75e-09!33;CL:0000393!8.58e-07!39;CL:0000211!8.58e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.21e-12,3;CL:0002614,1.13e-11,3;CL:0000117,4.89e-07,23;CL:0000337,4.89e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-24!73;UBERON:0005743!1.25e-24!73;UBERON:0000073!1.35e-23!75;UBERON:0001016!1.35e-23!75;UBERON:0001049!1.61e-21!52;UBERON:0005068!1.61e-21!52;UBERON:0006241!1.61e-21!52;UBERON:0007135!1.61e-21!52;UBERON:0000955!3.57e-20!50;UBERON:0006238!3.57e-20!50;UBERON:0002616!3.36e-19!49;UBERON:0000033!2.98e-18!63;UBERON:0004121!3.59e-18!102;UBERON:0000924!3.59e-18!102;UBERON:0006601!3.59e-18!102;UBERON:0002020!2.98e-16!34;UBERON:0002346!9.21e-16!71;UBERON:0003075!9.21e-16!71;UBERON:0007284!9.21e-16!71;UBERON:0003080!4.60e-13!40;UBERON:0002021!2.06e-12!10;UBERON:0000411!2.06e-12!10;UBERON:0001950!2.06e-12!10;UBERON:0003056!3.28e-12!49;UBERON:0002780!4.87e-12!39;UBERON:0001890!4.87e-12!39;UBERON:0006240!4.87e-12!39;UBERON:0002791!7.56e-12!29;UBERON:0003528!7.56e-12!29;UBERON:0001893!7.56e-12!29;UBERON:0007811!2.06e-10!86;UBERON:0003076!6.74e-10!12;UBERON:0003057!6.74e-10!12;UBERON:0000153!2.39e-09!94;UBERON:0002298!2.50e-09!6;UBERON:0000956!3.88e-09!21;UBERON:0001869!3.88e-09!21;UBERON:0000203!3.88e-09!21;UBERON:0002619!6.05e-09!17;UBERON:0002240!1.39e-07!6;UBERON:0005174!1.39e-07!6;UBERON:0001137!1.39e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-31,54;UBERON:0001049,7.21e-27,52;UBERON:0005068,7.21e-27,52;UBERON:0006241,7.21e-27,52;UBERON:0007135,7.21e-27,52;UBERON:0002616,7.48e-25,46;UBERON:0001017,7.50e-25,73;UBERON:0000955,3.00e-24,47;UBERON:0006238,3.00e-24,47;UBERON:0001016,4.38e-24,75;UBERON:0002346,3.90e-21,64;UBERON:0003075,3.90e-21,64;UBERON:0007284,3.90e-21,64;UBERON:0004121,3.49e-18,95;UBERON:0000924,3.49e-18,95;UBERON:0006601,3.49e-18,95;UBERON:0010371,4.56e-18,73;UBERON:0003080,2.04e-17,40;UBERON:0002950,2.26e-15,4;UBERON:0001891,2.26e-15,4;UBERON:0009616,2.26e-15,4;UBERON:0010286,2.26e-15,4;UBERON:0003528,2.49e-15,29;UBERON:0002791,2.49e-15,29;UBERON:0001893,2.49e-15,29;UBERON:0002780,2.64e-15,39;UBERON:0001890,2.64e-15,39;UBERON:0006240,2.64e-15,39;UBERON:0002020,5.36e-15,34;UBERON:0003056,1.07e-13,49;UBERON:0010314,1.50e-13,92;UBERON:0004684,3.21e-12,3;UBERON:0002275,3.21e-12,3;UBERON:0002021,4.33e-12,10;UBERON:0000411,4.33e-12,10;UBERON:0001950,4.33e-12,10;UBERON:0002038,1.13e-11,3;UBERON:0009663,1.13e-11,3;UBERON:0009661,1.13e-11,3;UBERON:0000125,1.13e-11,3;UBERON:0002308,1.13e-11,3;UBERON:0003076,2.51e-10,12;UBERON:0003057,2.51e-10,12;UBERON:0000025,3.43e-10,114;UBERON:0004733,6.61e-10,6;UBERON:0004732,6.61e-10,6;UBERON:0002028,6.61e-10,6;UBERON:0007277,6.61e-10,6;UBERON:0000956,2.03e-09,21;UBERON:0001869,2.03e-09,21;UBERON:0000203,2.03e-09,21;UBERON:0004111,2.88e-09,122;UBERON:0002619,3.55e-09,17;UBERON:0001896,6.99e-09,2;UBERON:0002298,6.99e-09,2;UBERON:0005290,6.99e-09,2;UBERON:0010096,6.99e-09,2;UBERON:0002420,1.56e-07,8;UBERON:0007245,1.56e-07,8;UBERON:0010009,1.56e-07,8;UBERON:0010011,1.56e-07,8;UBERON:0000454,1.56e-07,8;UBERON:0011216,8.89e-07,194 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,1.14260393761521,0.441737081903227,0,0,0,8.8092704799511,8.55505165170758,10.752457327937,0,0.0914876436024097,0,3.90856198601933,7.31591393041184,5.19514042441154,0.589257170947335,0.711858403995515,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,10.9347166765521,5.03250663100489,0,1.73824320192276,1.27857728665165,10.389402227978,5.84068547043927,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.81931657357869,0,0,0,0,0,0.275936746304732,10.7568895291821,9.37693492737625,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,2.30162618253588,0.572895513439397,0.68741272937475,0.685082519770642,3.7769694869485,2.02506750069542,1.80128481289688,2.26571204492102,1.55328093525546,0.103787347584177,0,0,0,0,0,0,0.412070114477788,0,0.505394423527595,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p4@Reps2 | |||
}} |
Revision as of 03:45, 6 August 2015
Short description: | p4@Reps2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Reps2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000155043_5end |
EntrezGene: | 194590 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.21e-12 | 3 |
neuron of the substantia nigra | 1.13e-11 | 3 |
CNS neuron (sensu Vertebrata) | 4.89e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.89e-07 | 23 |