FFCP PHASE1:Mm9::chrX:57400848..57400857,-: Difference between revisions
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{{FFCP|EntrezGene=109904|HGNC=|MCL_coexpression_id=20|UniProt=Q8C067|association_with_transcript=19bp_to_ENSMUST00000101531_5end|description=CAGE_peak_2_at_Mcf2_5end|id=chrX:57400848..57400857,-|ontology_enrichment_celltype=CL:0000117!4.67e-12!23;CL:0000337!4.67e-12!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.39e-13,23;CL:0000337,7.39e-13,23;CL:0002610,3.32e-11,3;CL:0002614,9.60e-11,3;CL:0000540,2.07e-08,33;CL:0000047,2.07e-08,33;CL:0000031,2.07e-08,33;CL:0000404,2.07e-08,33;CL:0002611,4.07e-07,2;CL:0000393,7.67e-07,39;CL:0000211,7.67e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.13e-24!52;UBERON:0005068!8.13e-24!52;UBERON:0006241!8.13e-24!52;UBERON:0007135!8.13e-24!52;UBERON:0000033!2.00e-22!63;UBERON:0000955!4.69e-22!50;UBERON:0006238!4.69e-22!50;UBERON:0002616!4.41e-21!49;UBERON:0002346!5.32e-21!71;UBERON:0003075!5.32e-21!71;UBERON:0007284!5.32e-21!71;UBERON:0001017!1.85e-20!73;UBERON:0005743!1.85e-20!73;UBERON:0000073!1.70e-19!75;UBERON:0001016!1.70e-19!75;UBERON:0002020!7.87e-18!34;UBERON:0003056!1.42e-17!49;UBERON:0004121!1.44e-16!102;UBERON:0000924!1.44e-16!102;UBERON:0006601!1.44e-16!102;UBERON:0003080!6.75e-16!40;UBERON:0002780!6.01e-15!39;UBERON:0001890!6.01e-15!39;UBERON:0006240!6.01e-15!39;UBERON:0002791!3.75e-13!29;UBERON:0003528!3.75e-13!29;UBERON:0001893!3.75e-13!29;UBERON:0007811!1.48e-12!86;UBERON:0000153!2.42e-10!94;UBERON:0003076!8.93e-09!12;UBERON:0003057!8.93e-09!12;UBERON:0002619!3.08e-08!17;UBERON:0002298!3.68e-08!6;UBERON:0002021!4.23e-08!10;UBERON:0000411!4.23e-08!10;UBERON:0001950!4.23e-08!10;UBERON:0000956!5.37e-08!21;UBERON:0001869!5.37e-08!21;UBERON:0000203!5.37e-08!21;UBERON:0002240!1.32e-07!6;UBERON:0005174!1.32e-07!6;UBERON:0001137!1.32e-07!6;UBERON:0002420!7.67e-07!8;UBERON:0007245!7.67e-07!8;UBERON:0010009!7.67e-07!8;UBERON:0010011!7.67e-07!8;UBERON:0000454!7.67e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.55e-30,54;UBERON:0001049,5.06e-26,52;UBERON:0005068,5.06e-26,52;UBERON:0006241,5.06e-26,52;UBERON:0007135,5.06e-26,52;UBERON:0001017,7.48e-26,73;UBERON:0001016,4.85e-25,75;UBERON:0002346,1.82e-22,64;UBERON:0003075,1.82e-22,64;UBERON:0007284,1.82e-22,64;UBERON:0004121,1.54e-20,95;UBERON:0000924,1.54e-20,95;UBERON:0006601,1.54e-20,95;UBERON:0002020,1.81e-20,34;UBERON:0010371,3.72e-19,73;UBERON:0000955,1.17e-18,47;UBERON:0006238,1.17e-18,47;UBERON:0002616,6.88e-17,46;UBERON:0003080,6.53e-15,40;UBERON:0010314,2.78e-14,92;UBERON:0002950,8.71e-14,4;UBERON:0001891,8.71e-14,4;UBERON:0009616,8.71e-14,4;UBERON:0010286,8.71e-14,4;UBERON:0002240,1.57e-13,6;UBERON:0005174,1.57e-13,6;UBERON:0001137,1.57e-13,6;UBERON:0003056,2.17e-13,49;UBERON:0003528,3.25e-13,29;UBERON:0002791,3.25e-13,29;UBERON:0001893,3.25e-13,29;UBERON:0002780,3.69e-13,39;UBERON:0001890,3.69e-13,39;UBERON:0006240,3.69e-13,39;UBERON:0003076,6.33e-13,12;UBERON:0003057,6.33e-13,12;UBERON:0004684,3.32e-11,3;UBERON:0002275,3.32e-11,3;UBERON:0002038,9.60e-11,3;UBERON:0009663,9.60e-11,3;UBERON:0009661,9.60e-11,3;UBERON:0000125,9.60e-11,3;UBERON:0002308,9.60e-11,3;UBERON:0001948,1.54e-10,5;UBERON:0002315,1.54e-10,5;UBERON:0002021,2.26e-10,10;UBERON:0000411,2.26e-10,10;UBERON:0001950,2.26e-10,10;UBERON:0002420,4.39e-10,8;UBERON:0007245,4.39e-10,8;UBERON:0010009,4.39e-10,8;UBERON:0010011,4.39e-10,8;UBERON:0000454,4.39e-10,8;UBERON:0000025,1.61e-09,114;UBERON:0004111,1.31e-08,122;UBERON:0001896,3.68e-08,2;UBERON:0002298,3.68e-08,2;UBERON:0005290,3.68e-08,2;UBERON:0010096,3.68e-08,2;UBERON:0002619,7.40e-08,17;UBERON:0002256,4.07e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,2.57085885963423,1.10434270475807,0.122490799214954,0.383381884072945,0,4.40463523997555,2.93680877595932,4.91540906419979,0.263772575460388,0.457438218012048,0,4.4669279840221,2.25105044012672,2.59757021220577,2.94628585473668,2.42031857358475,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0,0,0,0,0,2.69623150928681,1.83000241127451,1.7591609295801,0.521472960576829,1.02286182932132,4.98691306942944,2.59586020908412,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.3377599609307,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.85321415970701,5.04010252346474,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0.141940085208269,0,0.162886959353576,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:109904 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C067 | |||
|association_with_transcript=19bp_to_ENSMUST00000101531_5end | |||
|cluster_id=chrX:57400848..57400857,- | |||
|description=CAGE_peak_2_at_Mcf2_5end | |||
|id=chrX:57400848..57400857,- | |||
|ontology_enrichment_celltype=CL:0000117!4.67e-12!23;CL:0000337!4.67e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.39e-13,23;CL:0000337,7.39e-13,23;CL:0002610,3.32e-11,3;CL:0002614,9.60e-11,3;CL:0000540,2.07e-08,33;CL:0000047,2.07e-08,33;CL:0000031,2.07e-08,33;CL:0000404,2.07e-08,33;CL:0002611,4.07e-07,2;CL:0000393,7.67e-07,39;CL:0000211,7.67e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.13e-24!52;UBERON:0005068!8.13e-24!52;UBERON:0006241!8.13e-24!52;UBERON:0007135!8.13e-24!52;UBERON:0000033!2.00e-22!63;UBERON:0000955!4.69e-22!50;UBERON:0006238!4.69e-22!50;UBERON:0002616!4.41e-21!49;UBERON:0002346!5.32e-21!71;UBERON:0003075!5.32e-21!71;UBERON:0007284!5.32e-21!71;UBERON:0001017!1.85e-20!73;UBERON:0005743!1.85e-20!73;UBERON:0000073!1.70e-19!75;UBERON:0001016!1.70e-19!75;UBERON:0002020!7.87e-18!34;UBERON:0003056!1.42e-17!49;UBERON:0004121!1.44e-16!102;UBERON:0000924!1.44e-16!102;UBERON:0006601!1.44e-16!102;UBERON:0003080!6.75e-16!40;UBERON:0002780!6.01e-15!39;UBERON:0001890!6.01e-15!39;UBERON:0006240!6.01e-15!39;UBERON:0002791!3.75e-13!29;UBERON:0003528!3.75e-13!29;UBERON:0001893!3.75e-13!29;UBERON:0007811!1.48e-12!86;UBERON:0000153!2.42e-10!94;UBERON:0003076!8.93e-09!12;UBERON:0003057!8.93e-09!12;UBERON:0002619!3.08e-08!17;UBERON:0002298!3.68e-08!6;UBERON:0002021!4.23e-08!10;UBERON:0000411!4.23e-08!10;UBERON:0001950!4.23e-08!10;UBERON:0000956!5.37e-08!21;UBERON:0001869!5.37e-08!21;UBERON:0000203!5.37e-08!21;UBERON:0002240!1.32e-07!6;UBERON:0005174!1.32e-07!6;UBERON:0001137!1.32e-07!6;UBERON:0002420!7.67e-07!8;UBERON:0007245!7.67e-07!8;UBERON:0010009!7.67e-07!8;UBERON:0010011!7.67e-07!8;UBERON:0000454!7.67e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.55e-30,54;UBERON:0001049,5.06e-26,52;UBERON:0005068,5.06e-26,52;UBERON:0006241,5.06e-26,52;UBERON:0007135,5.06e-26,52;UBERON:0001017,7.48e-26,73;UBERON:0001016,4.85e-25,75;UBERON:0002346,1.82e-22,64;UBERON:0003075,1.82e-22,64;UBERON:0007284,1.82e-22,64;UBERON:0004121,1.54e-20,95;UBERON:0000924,1.54e-20,95;UBERON:0006601,1.54e-20,95;UBERON:0002020,1.81e-20,34;UBERON:0010371,3.72e-19,73;UBERON:0000955,1.17e-18,47;UBERON:0006238,1.17e-18,47;UBERON:0002616,6.88e-17,46;UBERON:0003080,6.53e-15,40;UBERON:0010314,2.78e-14,92;UBERON:0002950,8.71e-14,4;UBERON:0001891,8.71e-14,4;UBERON:0009616,8.71e-14,4;UBERON:0010286,8.71e-14,4;UBERON:0002240,1.57e-13,6;UBERON:0005174,1.57e-13,6;UBERON:0001137,1.57e-13,6;UBERON:0003056,2.17e-13,49;UBERON:0003528,3.25e-13,29;UBERON:0002791,3.25e-13,29;UBERON:0001893,3.25e-13,29;UBERON:0002780,3.69e-13,39;UBERON:0001890,3.69e-13,39;UBERON:0006240,3.69e-13,39;UBERON:0003076,6.33e-13,12;UBERON:0003057,6.33e-13,12;UBERON:0004684,3.32e-11,3;UBERON:0002275,3.32e-11,3;UBERON:0002038,9.60e-11,3;UBERON:0009663,9.60e-11,3;UBERON:0009661,9.60e-11,3;UBERON:0000125,9.60e-11,3;UBERON:0002308,9.60e-11,3;UBERON:0001948,1.54e-10,5;UBERON:0002315,1.54e-10,5;UBERON:0002021,2.26e-10,10;UBERON:0000411,2.26e-10,10;UBERON:0001950,2.26e-10,10;UBERON:0002420,4.39e-10,8;UBERON:0007245,4.39e-10,8;UBERON:0010009,4.39e-10,8;UBERON:0010011,4.39e-10,8;UBERON:0000454,4.39e-10,8;UBERON:0000025,1.61e-09,114;UBERON:0004111,1.31e-08,122;UBERON:0001896,3.68e-08,2;UBERON:0002298,3.68e-08,2;UBERON:0005290,3.68e-08,2;UBERON:0010096,3.68e-08,2;UBERON:0002619,7.40e-08,17;UBERON:0002256,4.07e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,2.57085885963423,1.10434270475807,0.122490799214954,0.383381884072945,0,4.40463523997555,2.93680877595932,4.91540906419979,0.263772575460388,0.457438218012048,0,4.4669279840221,2.25105044012672,2.59757021220577,2.94628585473668,2.42031857358475,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0,0,0,0,0,2.69623150928681,1.83000241127451,1.7591609295801,0.521472960576829,1.02286182932132,4.98691306942944,2.59586020908412,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.3377599609307,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.85321415970701,5.04010252346474,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0.141940085208269,0,0.162886959353576,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.12950368523413,1.38097570952153,2.29158205375759,0.171853182343688,0,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,1.03552062350364,0.103787347584177,0,0,0,0,0.367687016900028,0,0.618105171716683,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.25384382367503,0,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p2@Mcf2 | |||
}} |
Revision as of 08:49, 6 August 2015
Short description: | p2@Mcf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mcf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 19bp_to_ENSMUST00000101531_5end |
EntrezGene: | 109904 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.39e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.39e-13 | 23 |
raphe nuclei neuron | 3.32e-11 | 3 |
neuron of the substantia nigra | 9.60e-11 | 3 |
neuron | 2.07e-08 | 33 |
neuronal stem cell | 2.07e-08 | 33 |
neuroblast | 2.07e-08 | 33 |
electrically signaling cell | 2.07e-08 | 33 |
neuron of the dorsal spinal cord | 4.07e-07 | 2 |
electrically responsive cell | 7.67e-07 | 39 |
electrically active cell | 7.67e-07 | 39 |