FFCP PHASE1:Hg19::chr11:120195992..120196023,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219902 | |EntrezGene=219902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28280 | |HGNC=28280 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0W5 | |UniProt=A8K0W5 | ||
|association_with_transcript=0bp_to_ENST00000314475,ENST00000529187,ENST00000531346,uc001pxg.2,uc001pxh.1,uc001pxi.1,uc001pxj.2,uc009zas.1,uc010rzm.1_5end | |association_with_transcript=0bp_to_ENST00000314475,ENST00000529187,ENST00000531346,uc001pxg.2,uc001pxh.1,uc001pxi.1,uc001pxj.2,uc009zas.1,uc010rzm.1_5end | ||
|cluster_id=chr11:120195992..120196023,+ | |||
|description=CAGE_peak_1_at_TMEM136_5end | |description=CAGE_peak_1_at_TMEM136_5end | ||
|id=chr11:120195992..120196023,+ | |id=chr11:120195992..120196023,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.63e-21!180;CL:0000222!5.90e-14!119;CL:0000183!4.59e-13!59;CL:0000680!1.88e-11!57;CL:0000056!1.88e-11!57;CL:0000355!1.88e-11!57;CL:0000393!2.31e-11!60;CL:0000211!2.31e-11!60;CL:0000187!3.65e-11!54;CL:0000192!1.53e-10!42;CL:0000514!1.53e-10!42;CL:0002321!8.18e-10!248;CL:0000220!8.87e-10!246;CL:0000359!9.07e-08!32 | |ontology_enrichment_celltype=CL:0000055!1.63e-21!180;CL:0000222!5.90e-14!119;CL:0000183!4.59e-13!59;CL:0000680!1.88e-11!57;CL:0000056!1.88e-11!57;CL:0000355!1.88e-11!57;CL:0000393!2.31e-11!60;CL:0000211!2.31e-11!60;CL:0000187!3.65e-11!54;CL:0000192!1.53e-10!42;CL:0000514!1.53e-10!42;CL:0002321!8.18e-10!248;CL:0000220!8.87e-10!246;CL:0000359!9.07e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000192;8.26e-08;43!CL:0000359;1.74e-07;32!CL:0000187;7.41e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.31e-14,121;CL:0000680,1.34e-11,58;CL:0000056,1.34e-11,58;CL:0000355,1.34e-11,58;CL:0000393,1.64e-11,61;CL:0000211,1.64e-11,61;CL:0000187,2.61e-11,55;CL:0000192,1.13e-10,43;CL:0000514,1.13e-10,43;CL:0002321,3.75e-10,250;CL:0000359,8.66e-08,32;CL:0000057,7.85e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;8.26e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!5.11e-20!312;UBERON:0000483!9.13e-20!309;UBERON:0000073!1.28e-16!94;UBERON:0001016!1.28e-16!94;UBERON:0002346!1.89e-16!90;UBERON:0000481!1.31e-15!347;UBERON:0003075!4.29e-15!86;UBERON:0007284!4.29e-15!86;UBERON:0000475!4.76e-15!365;UBERON:0000025!1.95e-14!194;UBERON:0005743!2.27e-14!86;UBERON:0000477!4.01e-14!286;UBERON:0001017!3.17e-13!82;UBERON:0002616!4.85e-13!59;UBERON:0001049!6.62e-13!57;UBERON:0005068!6.62e-13!57;UBERON:0006241!6.62e-13!57;UBERON:0007135!6.62e-13!57;UBERON:0000924!1.98e-12!173;UBERON:0006601!1.98e-12!173;UBERON:0000955!2.90e-12!69;UBERON:0006238!2.90e-12!69;UBERON:0000914!8.34e-12!83;UBERON:0002329!8.34e-12!83;UBERON:0003077!8.34e-12!83;UBERON:0003059!8.34e-12!83;UBERON:0007282!8.34e-12!83;UBERON:0009618!8.34e-12!83;UBERON:0007285!8.34e-12!83;UBERON:0003056!1.17e-11!61;UBERON:0004121!2.28e-11!169;UBERON:0004290!3.47e-11!70;UBERON:0004111!1.72e-10!241;UBERON:0001134!2.94e-10!61;UBERON:0002036!2.94e-10!61;UBERON:0003082!2.94e-10!61;UBERON:0000486!3.35e-10!82;UBERON:0000064!7.55e-10!219;UBERON:0002385!9.85e-10!63;UBERON:0001015!9.85e-10!63;UBERON:0000383!9.85e-10!63;UBERON:0000468!1.58e-09!659;UBERON:0000033!2.00e-09!123;UBERON:0002780!2.14e-09!41;UBERON:0001890!2.14e-09!41;UBERON:0006240!2.14e-09!41;UBERON:0003080!3.07e-09!42;UBERON:0002049!7.69e-09!79;UBERON:0007798!7.69e-09!79;UBERON:0005256!9.44e-09!143;UBERON:0002020!2.57e-08!34;UBERON:0003528!2.57e-08!34;UBERON:0001893!4.19e-08!34;UBERON:0000922!5.27e-08!612;UBERON:0000153!6.05e-08!129;UBERON:0007811!6.05e-08!129;UBERON:0002100!6.26e-08!216;UBERON:0002791!7.32e-08!33;UBERON:0002050!2.63e-07!605;UBERON:0005423!2.63e-07!605;UBERON:0000923!3.03e-07!604;UBERON:0005291!3.03e-07!604;UBERON:0006598!3.03e-07!604;UBERON:0002532!3.03e-07!604;UBERON:0001869!3.19e-07!32 | |ontology_enrichment_uberon=UBERON:0000119!5.11e-20!312;UBERON:0000483!9.13e-20!309;UBERON:0000073!1.28e-16!94;UBERON:0001016!1.28e-16!94;UBERON:0002346!1.89e-16!90;UBERON:0000481!1.31e-15!347;UBERON:0003075!4.29e-15!86;UBERON:0007284!4.29e-15!86;UBERON:0000475!4.76e-15!365;UBERON:0000025!1.95e-14!194;UBERON:0005743!2.27e-14!86;UBERON:0000477!4.01e-14!286;UBERON:0001017!3.17e-13!82;UBERON:0002616!4.85e-13!59;UBERON:0001049!6.62e-13!57;UBERON:0005068!6.62e-13!57;UBERON:0006241!6.62e-13!57;UBERON:0007135!6.62e-13!57;UBERON:0000924!1.98e-12!173;UBERON:0006601!1.98e-12!173;UBERON:0000955!2.90e-12!69;UBERON:0006238!2.90e-12!69;UBERON:0000914!8.34e-12!83;UBERON:0002329!8.34e-12!83;UBERON:0003077!8.34e-12!83;UBERON:0003059!8.34e-12!83;UBERON:0007282!8.34e-12!83;UBERON:0009618!8.34e-12!83;UBERON:0007285!8.34e-12!83;UBERON:0003056!1.17e-11!61;UBERON:0004121!2.28e-11!169;UBERON:0004290!3.47e-11!70;UBERON:0004111!1.72e-10!241;UBERON:0001134!2.94e-10!61;UBERON:0002036!2.94e-10!61;UBERON:0003082!2.94e-10!61;UBERON:0000486!3.35e-10!82;UBERON:0000064!7.55e-10!219;UBERON:0002385!9.85e-10!63;UBERON:0001015!9.85e-10!63;UBERON:0000383!9.85e-10!63;UBERON:0000468!1.58e-09!659;UBERON:0000033!2.00e-09!123;UBERON:0002780!2.14e-09!41;UBERON:0001890!2.14e-09!41;UBERON:0006240!2.14e-09!41;UBERON:0003080!3.07e-09!42;UBERON:0002049!7.69e-09!79;UBERON:0007798!7.69e-09!79;UBERON:0005256!9.44e-09!143;UBERON:0002020!2.57e-08!34;UBERON:0003528!2.57e-08!34;UBERON:0001893!4.19e-08!34;UBERON:0000922!5.27e-08!612;UBERON:0000153!6.05e-08!129;UBERON:0007811!6.05e-08!129;UBERON:0002100!6.26e-08!216;UBERON:0002791!7.32e-08!33;UBERON:0002050!2.63e-07!605;UBERON:0005423!2.63e-07!605;UBERON:0000923!3.03e-07!604;UBERON:0005291!3.03e-07!604;UBERON:0006598!3.03e-07!604;UBERON:0002532!3.03e-07!604;UBERON:0001869!3.19e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.93e-07;53!UBERON:0002616;2.93e-07;53!UBERON:0003528;3.06e-07;34!UBERON:0002020;3.06e-07;34!UBERON:0002780;3.72e-07;41!UBERON:0001890;3.72e-07;41!UBERON:0001893;4.02e-07;34!UBERON:0002791;4.31e-07;32!UBERON:0001869;7.82e-07;32 | |||
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| ||
|short_description=p1@TMEM136 | |short_description=p1@TMEM136 | ||
}} | }} |
Latest revision as of 05:16, 16 September 2015
Short description: | p1@TMEM136 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM136_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000314475, ENST00000529187, ENST00000531346, uc001pxg.2, uc001pxh.1, uc001pxi.1, uc001pxj.2, uc009zas.1, uc010rzm.1_5end |
EntrezGene: | TMEM136 |
HGNC: | 28280 |
UniProt: | A8K0W5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.31e-14 | 121 |
muscle precursor cell | 1.34e-11 | 58 |
myoblast | 1.34e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.34e-11 | 58 |
electrically responsive cell | 1.64e-11 | 61 |
electrically active cell | 1.64e-11 | 61 |
muscle cell | 2.61e-11 | 55 |
smooth muscle cell | 1.13e-10 | 43 |
smooth muscle myoblast | 1.13e-10 | 43 |
embryonic cell | 3.75e-10 | 250 |
vascular associated smooth muscle cell | 8.66e-08 | 32 |
fibroblast | 7.85e-07 | 76 |