FFCP PHASE1:Hg19::chr19:49004818..49004855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49004818..49004855,- | |||
|description=CAGE_peak_at_chr19:49004818..49004855,- | |description=CAGE_peak_at_chr19:49004818..49004855,- | ||
|id=chr19:49004818..49004855,- | |id=chr19:49004818..49004855,- | ||
|ontology_enrichment_celltype=CL:0000066!4.98e-29!254;CL:0002076!2.29e-17!43;CL:0000223!1.90e-16!59;CL:0002368!3.23e-09!13;CL:0002251!2.73e-08!21;CL:0000082!5.45e-08!19 | |ontology_enrichment_celltype=CL:0000066!4.98e-29!254;CL:0002076!2.29e-17!43;CL:0000223!1.90e-16!59;CL:0002368!3.23e-09!13;CL:0002251!2.73e-08!21;CL:0000082!5.45e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.34e-19;42!CL:0002368;4.15e-14;13!CL:0002251;1.26e-09;20!CL:0000082;1.50e-09;19!CL:0002202;2.63e-09;9!CL:0002632;2.63e-09;9!CL:0002159;1.14e-08;14!CL:0000039;1.32e-08;7!CL:0000586;1.32e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.82e-30,253;CL:0002076,3.69e-24,42;CL:0000223,9.90e-21,58;CL:0002368,2.53e-14,13;CL:0002251,8.39e-10,20;CL:0000082,1.25e-09,19;CL:0002202,1.96e-09,9;CL:0002632,1.96e-09,9;CL:0002159,1.36e-08,14;CL:0000039,1.67e-08,7;CL:0000586,1.67e-08,7 | |||
|ontology_enrichment_development_v019=CL:0000223;7.73e-11;58 | |||
|ontology_enrichment_disease=DOID:305!3.43e-25!106;DOID:0050687!3.56e-19!143;DOID:162!1.03e-13!235;DOID:14566!1.08e-12!239;DOID:1749!1.38e-08!14;DOID:299!2.58e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.38e-10;14!DOID:299;9.01e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.98e-20,106;DOID:0050687,1.62e-15,143;DOID:1749,2.27e-10,14;DOID:162,6.10e-09,235;DOID:14566,2.09e-08,239;DOID:299,7.83e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.77e-23!169;UBERON:0000925!6.77e-23!169;UBERON:0006595!6.77e-23!169;UBERON:0001007!9.03e-18!155;UBERON:0001555!9.03e-18!155;UBERON:0007026!9.03e-18!155;UBERON:0001004!7.39e-17!72;UBERON:0004921!1.03e-15!129;UBERON:0004185!1.03e-15!129;UBERON:0000065!6.98e-15!53;UBERON:0000077!1.62e-14!130;UBERON:0005911!5.77e-14!82;UBERON:0008947!1.37e-12!38;UBERON:0003258!1.37e-12!38;UBERON:0000464!5.26e-12!104;UBERON:0000466!6.80e-12!126;UBERON:0001041!4.05e-11!98;UBERON:0000072!7.80e-11!46;UBERON:0005177!1.95e-10!107;UBERON:0005178!2.50e-10!34;UBERON:0002224!2.50e-10!34;UBERON:0005181!9.34e-10!35;UBERON:0002048!1.24e-09!22;UBERON:0000117!1.24e-09!22;UBERON:0000171!1.24e-09!22;UBERON:0000170!1.24e-09!22;UBERON:0005597!1.24e-09!22;UBERON:0000118!1.24e-09!22;UBERON:0005153!1.82e-09!37;UBERON:0004807!1.92e-08!28;UBERON:0009569!2.40e-08!113;UBERON:0006554!2.67e-08!44;UBERON:0005157!3.17e-08!51;UBERON:0004802!5.45e-08!19;UBERON:0000115!5.45e-08!19;UBERON:0001008!6.77e-08!45;UBERON:0000344!3.06e-07!12;UBERON:0000062!3.56e-07!511;UBERON:0000064!4.04e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;1.19e-12;22!UBERON:0005911;1.33e-12;36!UBERON:0005178;2.04e-12;34!UBERON:0002224;2.04e-12;34!UBERON:0002048;4.84e-12;22!UBERON:0000117;4.84e-12;22!UBERON:0000171;4.84e-12;22!UBERON:0000170;4.84e-12;22!UBERON:0005181;4.18e-11;35!UBERON:0004802;1.50e-09;19!UBERON:0000115;1.50e-09;19!UBERON:0004921;8.71e-09;33!UBERON:0000065;2.90e-08;44!UBERON:0000344;5.15e-08;20!UBERON:0000485;8.02e-08;7!UBERON:0003929;8.98e-08;7!UBERON:0003101;1.36e-07;22!UBERON:0000079;1.36e-07;22!UBERON:0006554;1.39e-07;30!UBERON:0001008;1.39e-07;30!UBERON:0000160;2.61e-07;17!UBERON:0001555;8.06e-07;54!UBERON:0001004;8.06e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.68e-22,160;UBERON:0000925,6.68e-22,160;UBERON:0006595,6.68e-22,160;UBERON:0001007,2.47e-16,145;UBERON:0001555,2.47e-16,145;UBERON:0007026,2.47e-16,145;UBERON:0001004,8.01e-15,74;UBERON:0005911,1.59e-14,82;UBERON:0005178,1.01e-13,34;UBERON:0002224,1.01e-13,34;UBERON:0005177,1.62e-13,101;UBERON:0005153,3.11e-13,37;UBERON:0005181,3.86e-13,35;UBERON:0004921,3.88e-13,118;UBERON:0002048,3.70e-12,22;UBERON:0000117,3.70e-12,22;UBERON:0000171,3.70e-12,22;UBERON:0000170,3.70e-12,22;UBERON:0005597,3.70e-12,22;UBERON:0000118,3.70e-12,22;UBERON:0006554,5.34e-12,47;UBERON:0001008,1.36e-11,48;UBERON:0005157,1.94e-11,47;UBERON:0000065,7.43e-11,54;UBERON:0008947,5.92e-10,38;UBERON:0003258,5.92e-10,38;UBERON:0004802,1.25e-09,19;UBERON:0000115,1.25e-09,19;UBERON:0009569,1.46e-09,112;UBERON:0004807,4.71e-09,28;UBERON:0000344,3.64e-08,20;UBERON:0000915,1.55e-07,52;UBERON:0003101,1.59e-07,22;UBERON:0000079,1.59e-07,22;UBERON:0000160,2.73e-07,17;UBERON:0000161,3.94e-07,36;UBERON:0001041,6.32e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.7030733015166,7.6758128476967,0.873765488520689,3.16520373874144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236132343941038,0,0,0.154816123316076,2.75826367343678,6.024118375565,4.43704812200145,0,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0.512321413058201,0,0,0.645484683583826,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,1.44076983047484,6.9216104775583,5.56176664176644,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,4.36094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89891279744945,4.09119180886252,5.73609190778008,1.82960559194393,2.12047629314376,1.62671520017326,1.96956004529204,3.78481276313443,1.45990943630332,0,0,0,0,0,0.354920400119532,0.842923450390509,0,0.330881918197182,0.217879444092406,0.71181185733329,0.943819157121151,0.784885860501384,1.15424147083917,0,0,0.8231480226628,0,0,0,0,0,6.3953988042419,0,11.1945291116798,1.1240175325762,2.71428225511403,4.0738915869753,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,3.74935335947108,4.53551746136921,3.40260233381728,0,0.290633938513962,0,0.492663237895943,1.93706554829097,0.414656231081544,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0.215714200818617,0,0.606255142892519,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,4.95523743325651,6.81721999031168,3.03867263488458,0,0,0,2.25599806453706,3.46569016969866,3.13739907670742,1.46139224653261,1.47772280450026,0,0,0,0,0.270946437543853,0.501689773854853,3.82314409567557,1.66215201785745,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.618246069886334,0,0,7.46545199395024,1.30012049207304,0,0,0,0,0,0,0,0,0,2.80984356113663,3.45942121257191,6.25302291223462,5.56367794705525,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73199802905922,4.02181365321472,3.26672954583968,0.847294206991012,7.74909670808214,3.36942951335251,2.66058092122005,3.67557440331135,0.507447609232169,0,0.569647187174163,0,0,0,0,0,2.45695363593188,0,13.2321716629757,0,0,0,0,0,0.383010740264733,1.2700414963433,0,0.842391534340376,0.228234679033192,0,0,0,0,0,0.851692475380653,0.343505344755765,0.307240764308458,1.3420566473545,0.500547425135725,0.976940477010201,0,0,0,0,1.4098700508785,2.24568648489864,0,0,0,0,0.71623345421307,0,0.307160702099232,0,0.140669416410513,0,0,2.95575571379191,0.19924798825107,0.828851746593443,0,0.102268682502155,0,0,0.179736702294654,0.895105873378046,2.04628948090749,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0.7812832832557,1.31189999994294,0,1.4793148277115,5.59358030644086,6.38246740773428,0.689486746482929,0,0,0,0,0,0,0.591095237907095,0,1.19832309870889,2.09135616417905,0.769502585037971,0,5.07240589653732,1.6156375993759,2.39024218228418,1.27600463892768,1.83195186803725,3.73124343213044,0,0.156980256395025,1.32969345520125,6.09108283666388,5.68581349521445,5.87375554415449,1.70778359451767,0.317873157960757,4.64195741961659,0.979396848954886,5.37141671448975,4.11138415509973,1.99052386215701,1.94606641907346,3.05515072466813,0,0,0,0.067401132980677,0,0,0,3.13063390291344,0,5.52418163989147,2.41981432097328,0,0.252746318513952,0,0.207376382794494,0,0,0,0,5.12297182853627,0,4.85967267338367,11.9550724845541,4.00472350269852,1.39781334593624,0.171986032471617,0.870806981601766,1.0232504392066,0.903270027585302,4.07353869251362,0,0.451961481561065,0,0,0.0633107959558787,2.34661659281764,3.84762337207362,1.92107695265417,0,0.72045208577053,0,0,0,0,2.59263438078475,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.998395002494955,0,0,0,0,2.32991899054908,0.86661500537946,0.824158583811665,1.3480708770837,0.590564889088493,0,0.795229689809303,0.136203406111576,1.76828463311521,2.33817042215297,2.07720169014593,0,0,0,0.335434687599266,1.18208560948797,2.30800187793992,1.5840050477911,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,0,0,0.13223260174269,3.07956308191793,10.5722253347501,4.80543356554626,1.41483874589699,1.65695622138878,0,0,0.487170393523584,1.91502377331055,0,0,0,0,1.41348686625211,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0.276697269872462,0,0,1.14186133417987,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,5.39335525140449,0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| ||
|short_description=p@chr19:49004818..49004855,- | |short_description=p@chr19:49004818..49004855,- | ||
}} | }} |
Latest revision as of 15:44, 27 July 2015
Short description: | p@chr19:49004818..49004855, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49004818..49004855, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.82e-30 | 253 |
endo-epithelial cell | 3.69e-24 | 42 |
endodermal cell | 9.90e-21 | 58 |
respiratory epithelial cell | 2.53e-14 | 13 |
epithelial cell of alimentary canal | 8.39e-10 | 20 |
epithelial cell of lung | 1.25e-09 | 19 |
epithelial cell of tracheobronchial tree | 1.96e-09 | 9 |
epithelial cell of lower respiratory tract | 1.96e-09 | 9 |
general ecto-epithelial cell | 1.36e-08 | 14 |
germ line cell | 1.67e-08 | 7 |
germ cell | 1.67e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.98e-20 | 106 |
cell type cancer | 1.62e-15 | 143 |
squamous cell carcinoma | 2.27e-10 | 14 |
cancer | 6.10e-09 | 235 |
disease of cellular proliferation | 2.09e-08 | 239 |
adenocarcinoma | 7.83e-07 | 25 |