FFCP PHASE1:Hg19::chr1:27190453..27190483,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_uc010ofi.1_5end | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_6_at_uc010ofi.1_5end | |||
|id=chr1:27190453..27190483,- | |||
|ontology_enrichment_celltype=CL:0000066!1.46e-40!254;CL:0002076!1.85e-20!43;CL:0002368!9.59e-16!13;CL:0000223!5.16e-14!59;CL:0002159!2.73e-11!13;CL:0002202!1.55e-09!9;CL:0002632!1.55e-09!9;CL:0000244!1.09e-08!4;CL:0000731!1.09e-08!4;CL:0002251!2.80e-08!21;CL:0002327!4.78e-08!4;CL:0000349!5.14e-07!3;CL:0002577!5.14e-07!3;CL:0002328!8.44e-07!3;CL:0002621!9.27e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.11e-21;14!CL:0002076;1.86e-20;42!CL:0000244;6.53e-20;4!CL:0000731;6.53e-20;4!CL:0002368;4.54e-17;13!CL:0002577;3.11e-15;3!CL:0002621;6.26e-15;3!CL:0002328;9.40e-15;3!CL:0000240;1.84e-13;6!CL:0000311;1.84e-13;6!CL:0000079;1.84e-13;6!CL:0000237;1.84e-13;6!CL:0002327;1.27e-11;4!CL:0000575;4.26e-11;2!CL:0000312;9.96e-10;5!CL:0002077;1.07e-09;34!CL:0000362;3.93e-09;9!CL:0002202;1.02e-08;9!CL:0002632;1.02e-08;9!CL:0002251;4.98e-08;20!CL:0002166;1.61e-07;3!CL:0002231;2.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.06e-25,42;CL:0002159,9.75e-22,14;CL:0000244,7.58e-20,4;CL:0000731,7.58e-20,4;CL:0000066,7.99e-19,253;CL:0000223,2.71e-17,58;CL:0002368,3.64e-17,13;CL:0002577,1.46e-15,3;CL:0002328,5.17e-15,3;CL:0002621,6.58e-15,3;CL:0000240,1.52e-13,6;CL:0000311,1.52e-13,6;CL:0000079,1.52e-13,6;CL:0000237,1.52e-13,6;CL:0000036,1.52e-13,6;CL:0000357,1.52e-13,6;CL:0000114,1.52e-13,6;CL:0002327,1.03e-11,4;CL:0000575,4.49e-11,2;CL:0002077,2.97e-10,34;CL:0000312,8.87e-10,5;CL:0000362,3.36e-09,9;CL:0002202,8.09e-09,9;CL:0002632,8.09e-09,9;CL:0002251,5.05e-08,20;CL:0002166,1.69e-07,3;CL:0002231,2.74e-07,3;CL:0002321,4.19e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;1.84e-13;6!CL:0000114;1.84e-13;6!CL:0000223;2.63e-09;58 | |||
|ontology_enrichment_disease=DOID:305!3.63e-18!106;DOID:0050687!5.51e-12!143;DOID:1749!3.92e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.68e-24!53;UBERON:0001004!2.05e-24!72;UBERON:0004119!1.01e-22!169;UBERON:0000925!1.01e-22!169;UBERON:0006595!1.01e-22!169;UBERON:0000072!1.03e-19!46;UBERON:0008947!1.52e-17!38;UBERON:0003258!1.52e-17!38;UBERON:0001007!3.27e-14!155;UBERON:0001555!3.27e-14!155;UBERON:0007026!3.27e-14!155;UBERON:0001557!3.69e-14!19;UBERON:0000077!4.83e-14!130;UBERON:0001737!1.08e-13!9;UBERON:0004921!9.13e-13!129;UBERON:0004185!9.13e-13!129;UBERON:0000064!1.79e-12!219;UBERON:0001041!1.75e-11!98;UBERON:0005153!8.51e-11!37;UBERON:0000365!1.16e-09!5;UBERON:0005631!1.37e-09!14;UBERON:0000158!1.37e-09!14;UBERON:0005178!2.38e-09!34;UBERON:0002224!2.38e-09!34;UBERON:0005181!5.76e-09!35;UBERON:0005157!9.45e-09!51;UBERON:0000063!1.41e-08!97;UBERON:0000062!3.00e-08!511;UBERON:0006554!3.08e-08!44;UBERON:0001911!4.78e-08!4;UBERON:0005333!4.78e-08!4;UBERON:0008425!4.78e-08!4;UBERON:0005311!4.78e-08!4;UBERON:0001008!5.91e-08!45;UBERON:0005910!5.94e-08!6;UBERON:0000161!8.39e-08!35;UBERON:0004807!9.20e-08!28;UBERON:0005911!2.52e-07!82;UBERON:0007196!3.00e-07!14;UBERON:0001558!3.00e-07!14;UBERON:0003124!4.49e-07!7;UBERON:0000166!8.06e-07!21;UBERON:0004815!8.44e-07!3;UBERON:0002031!8.44e-07!3;UBERON:0001949!9.27e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;6.38e-19;12!UBERON:0000365;5.82e-16;5!UBERON:0001949;6.26e-15;3!UBERON:0004815;9.40e-15;3!UBERON:0002031;9.40e-15;3!UBERON:0005910;2.53e-13;6!UBERON:0001911;1.27e-11;4!UBERON:0001987;1.50e-11;4!UBERON:0005911;3.18e-09;36!UBERON:0002185;4.75e-09;5!UBERON:0003729;7.27e-09;13!UBERON:0001043;1.33e-07;3!UBERON:0004807;3.35e-07;22!UBERON:0010371;9.39e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.55e-16,5;UBERON:0004815,5.17e-15,3;UBERON:0002031,5.17e-15,3;UBERON:0001949,6.58e-15,3;UBERON:0005910,2.79e-13,6;UBERON:0001987,8.54e-12,4;UBERON:0004340,8.54e-12,4;UBERON:0001911,1.03e-11,4;UBERON:0005333,1.03e-11,4;UBERON:0008425,1.03e-11,4;UBERON:0005311,1.03e-11,4;UBERON:0004119,1.15e-11,160;UBERON:0000925,1.15e-11,160;UBERON:0006595,1.15e-11,160;UBERON:0003124,2.79e-11,7;UBERON:0006554,2.53e-10,47;UBERON:0003102,2.64e-10,99;UBERON:0001008,4.60e-10,48;UBERON:0002185,3.34e-09,5;UBERON:0003729,7.15e-09,13;UBERON:0005157,1.74e-08,47;UBERON:0005631,1.83e-08,14;UBERON:0000158,1.83e-08,14;UBERON:0001043,1.39e-07,3;UBERON:0009143,1.39e-07,3;UBERON:0005153,3.92e-07,37;UBERON:0001004,8.82e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,2.10844143144775,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18577172975525,4.82019775619758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28543450377605,1.09098448236334,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.337169380156203,0.482022059766964,0.110293972732394,0.217879444092406,0.474541238222193,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,2.52425656439839,3.37205259772859,6.93649909640253,1.29623823221941,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56136837907439,0.335964256397719,1.27597587518148,1.43293636324557,2.3250715081117,4.98397482914775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94065842880137,1.66435439510497,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00759705454927,1.10497186723076,0,0,0,0.451199612907412,0.231046011313244,0,1.46139224653261,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,2.60024098414608,0,0,0,0,0,0,0,0,0,1.15699440752685,2.11409074101617,0.638063562472921,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,3.26672954583968,0,1.29151611801369,5.05414427002877,5.76459199597678,1.1486170010348,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,2.14870036263921,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0.174919999992391,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0.384751292518985,0,0,0,0,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04135843001079,0.881931576729399,0.34823682632161,0,0.687944129886466,0.19351266257817,0.219267951258557,0.574808199372465,2.23074737923365,0,0,0,0,0,0.195551382734803,0,0,0.39961921916426,0,0,0,0,0.248505071130865,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68978156359193,0.0788057072991982,0,0,0.537862017998534,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,0,0,0.979156554036111,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,1.28400018965175,0.462102664601353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.6828739083758,0,0,0,0,0,0,0,0,0.111855431797792,0,0.243835849964539,0,0,0,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0.870866991587845,1.02669990325584,0.471464371102113,0.358611026963382,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@uc010ofi.1 | |||
}} |
Revision as of 17:17, 10 January 2014
Short description: | p6@uc010ofi.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_uc010ofi.1_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | -4bp_to_uc010ofi.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 6.55e-16 | 5 |
lower respiratory tract epithelium | 5.17e-15 | 3 |
epithelium of bronchus | 5.17e-15 | 3 |
gingival epithelium | 6.58e-15 | 3 |
transitional epithelium | 2.79e-13 | 6 |
placenta | 8.54e-12 | 4 |
allantois | 8.54e-12 | 4 |
mammary gland | 1.03e-11 | 4 |
mammary bud | 1.03e-11 | 4 |
mammary ridge | 1.03e-11 | 4 |
mammary placode | 1.03e-11 | 4 |
endoderm-derived structure | 1.15e-11 | 160 |
endoderm | 1.15e-11 | 160 |
presumptive endoderm | 1.15e-11 | 160 |
chorion | 2.79e-11 | 7 |
urinary system structure | 2.53e-10 | 47 |
surface structure | 2.64e-10 | 99 |
renal system | 4.60e-10 | 48 |
bronchus | 3.34e-09 | 5 |
mouth mucosa | 7.15e-09 | 13 |
epithelial fold | 1.74e-08 | 47 |
extraembryonic membrane | 1.83e-08 | 14 |
membranous layer | 1.83e-08 | 14 |
esophagus | 1.39e-07 | 3 |
esophageal region | 1.39e-07 | 3 |
epithelial bud | 3.92e-07 | 37 |
respiratory system | 8.82e-07 | 74 |