FFCP PHASE2:Hg19::chr2:45169143..45169167,+
From FANTOM5_SSTAR
Jump to: navigation, search
Short description: | p5@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SIX3_5end |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | 106bp_to_NM_005413, uc002run.1_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | O95343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@SIX3 |
---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.18e-14 | 4 |
vertebrate lens cell | 1.18e-14 | 4 |
lens epithelial cell | 1.18e-14 | 4 |
retinal pigment epithelial cell | 1.72e-12 | 3 |
ciliated cell | 3.23e-12 | 3 |
ciliated epithelial cell | 3.23e-12 | 3 |
multi-ciliated epithelial cell | 3.23e-12 | 3 |
non-pigmented ciliary epithelial cell | 3.23e-12 | 3 |
visual pigment cell | 1.85e-09 | 4 |
columnar/cuboidal epithelial cell | 4.03e-09 | 27 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 2.78e-39 | 11 |
pre-chordal neural plate | 7.45e-33 | 61 |
eye | 5.76e-32 | 21 |
visual system | 5.76e-32 | 21 |
camera-type eye | 6.28e-29 | 20 |
simple eye | 6.28e-29 | 20 |
immature eye | 6.28e-29 | 20 |
ocular region | 6.28e-29 | 20 |
eyeball of camera-type eye | 6.28e-29 | 20 |
optic cup | 6.28e-29 | 20 |
Showing 1 to 10 of 88 entries