FFCP PHASE1:Mm9::chr16:67621168..67621177,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=239857|HGNC=|MCL_coexpression_id=1|UniProt=Q8BLQ9|association_with_transcript=-15bp_to_ENSMUST00000114292,ENSMUST00000120898,NM_001145977,NM_178721,uc007zqn.2,uc007zqo.2_5end|description=CAGE_peak_3_at_Cadm2_5end|id=chr16:67621168..67621177,-|ontology_enrichment_celltype=CL:0000117!7.88e-16!23;CL:0000337!7.88e-16!23;CL:0000540!6.75e-15!33;CL:0000047!6.75e-15!33;CL:0000031!6.75e-15!33;CL:0000404!6.75e-15!33;CL:0000393!5.13e-13!39;CL:0000211!5.13e-13!39;CL:0000221!1.78e-11!44;CL:0000133!1.78e-11!44;CL:0002319!2.36e-11!43;CL:0000055!7.73e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.89e-21,23;CL:0000337,2.89e-21,23;CL:0000540,2.51e-13,33;CL:0000047,2.51e-13,33;CL:0000031,2.51e-13,33;CL:0000404,2.51e-13,33;CL:0000393,1.51e-10,39;CL:0000211,1.51e-10,39;CL:0002319,3.87e-09,43;CL:0000221,7.91e-09,44;CL:0000133,7.91e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.67e-33!73;UBERON:0005743!1.67e-33!73;UBERON:0000073!6.59e-32!75;UBERON:0001016!6.59e-32!75;UBERON:0000033!1.48e-31!63;UBERON:0001049!8.92e-29!52;UBERON:0005068!8.92e-29!52;UBERON:0006241!8.92e-29!52;UBERON:0007135!8.92e-29!52;UBERON:0004121!3.05e-28!102;UBERON:0000924!3.05e-28!102;UBERON:0006601!3.05e-28!102;UBERON:0002346!4.30e-28!71;UBERON:0003075!4.30e-28!71;UBERON:0007284!4.30e-28!71;UBERON:0000955!1.19e-27!50;UBERON:0006238!1.19e-27!50;UBERON:0002616!9.72e-27!49;UBERON:0003056!1.19e-26!49;UBERON:0002020!1.01e-22!34;UBERON:0003080!1.28e-21!40;UBERON:0002780!8.54e-21!39;UBERON:0001890!8.54e-21!39;UBERON:0006240!8.54e-21!39;UBERON:0002791!4.54e-19!29;UBERON:0003528!4.54e-19!29;UBERON:0001893!4.54e-19!29;UBERON:0007811!1.23e-17!86;UBERON:0000153!3.89e-17!94;UBERON:0000956!2.08e-13!21;UBERON:0001869!2.08e-13!21;UBERON:0000203!2.08e-13!21;UBERON:0002619!3.85e-11!17;UBERON:0002021!1.47e-10!10;UBERON:0000411!1.47e-10!10;UBERON:0001950!1.47e-10!10;UBERON:0003076!1.44e-07!12;UBERON:0003057!1.44e-07!12;UBERON:0002420!7.03e-07!8;UBERON:0007245!7.03e-07!8;UBERON:0010009!7.03e-07!8;UBERON:0010011!7.03e-07!8;UBERON:0000454!7.03e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.32e-45,54;UBERON:0002346,4.96e-42,64;UBERON:0003075,4.96e-42,64;UBERON:0007284,4.96e-42,64;UBERON:0001049,9.50e-42,52;UBERON:0005068,9.50e-42,52;UBERON:0006241,9.50e-42,52;UBERON:0007135,9.50e-42,52;UBERON:0001017,1.28e-38,73;UBERON:0002020,5.33e-38,34;UBERON:0001016,2.69e-37,75;UBERON:0010371,1.59e-35,73;UBERON:0004121,5.23e-35,95;UBERON:0000924,5.23e-35,95;UBERON:0006601,5.23e-35,95;UBERON:0000955,9.58e-35,47;UBERON:0006238,9.58e-35,47;UBERON:0002616,3.98e-33,46;UBERON:0003056,1.04e-31,49;UBERON:0003528,8.06e-31,29;UBERON:0002791,8.06e-31,29;UBERON:0001893,8.06e-31,29;UBERON:0003080,4.72e-29,40;UBERON:0002780,1.48e-27,39;UBERON:0001890,1.48e-27,39;UBERON:0006240,1.48e-27,39;UBERON:0010314,5.74e-26,92;UBERON:0000956,8.26e-20,21;UBERON:0001869,8.26e-20,21;UBERON:0000203,8.26e-20,21;UBERON:0002021,1.54e-19,10;UBERON:0000411,1.54e-19,10;UBERON:0001950,1.54e-19,10;UBERON:0002619,3.01e-17,17;UBERON:0000025,1.21e-13,114;UBERON:0003076,1.32e-12,12;UBERON:0003057,1.32e-12,12;UBERON:0002420,3.36e-12,8;UBERON:0007245,3.36e-12,8;UBERON:0010009,3.36e-12,8;UBERON:0010011,3.36e-12,8;UBERON:0000454,3.36e-12,8;UBERON:0004111,4.09e-12,122;UBERON:0002240,1.20e-09,6;UBERON:0005174,1.20e-09,6;UBERON:0001137,1.20e-09,6;UBERON:0000483,1.01e-08,174;UBERON:0000119,1.67e-08,176;UBERON:0001948,3.37e-08,5;UBERON:0002315,3.37e-08,5;UBERON:0000369,5.25e-08,5;UBERON:0002435,5.25e-08,5;UBERON:0000204,5.25e-08,5;UBERON:0010082,5.25e-08,5;UBERON:0011216,9.67e-08,194;UBERON:0002950,2.64e-07,4;UBERON:0001891,2.64e-07,4;UBERON:0009616,2.64e-07,4;UBERON:0010286,2.64e-07,4|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.23706337375356,0.528990979272033,3.80298842103708,0,0,0,0,0,0.898800331555214,0.384218305321555,1.24427534770173,0.540023753326763,1.05162480675691,4.57041575046086,4.41737081903227,0.979926393719632,0.766763768145891,4.5960939330501,17.6185409599022,9.83192503255945,8.60196586234964,2.2420668914133,1.28082701043374,5.2091337055676,6.97957497503452,6.19038871034848,5.95913166329559,9.42811473515737,5.83723891276322,3.35519002485541,0,0,0,0,0,0,0,0.448026887097336,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7606974595427,6.49284791121711,0,0,0,0,9.73639156131348,12.3525162761029,4.52355667606312,16.339486098074,16.8772201838018,8.72709787150152,10.707923362472,0,0,0,1.68353484709179,0.390361328888111,0.229902104433473,0.900310649026746,0.753524089178575,1.7009124787832,1.66547836370305,1.3118241438362,5.43277078551933,0,0.189106080167819,0.175951124163949,0,1.11218899690239,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.56594717102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| ||
|EntrezGene=239857 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BLQ9 | |||
|association_with_transcript=-15bp_to_ENSMUST00000114292,ENSMUST00000120898,NM_001145977,NM_178721,uc007zqn.2,uc007zqo.2_5end | |||
|description=CAGE_peak_3_at_Cadm2_5end | |||
|id=chr16:67621168..67621177,- | |||
|ontology_enrichment_celltype=CL:0000117!7.88e-16!23;CL:0000337!7.88e-16!23;CL:0000540!6.75e-15!33;CL:0000047!6.75e-15!33;CL:0000031!6.75e-15!33;CL:0000404!6.75e-15!33;CL:0000393!5.13e-13!39;CL:0000211!5.13e-13!39;CL:0000221!1.78e-11!44;CL:0000133!1.78e-11!44;CL:0002319!2.36e-11!43;CL:0000055!7.73e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.89e-21,23;CL:0000337,2.89e-21,23;CL:0000540,2.51e-13,33;CL:0000047,2.51e-13,33;CL:0000031,2.51e-13,33;CL:0000404,2.51e-13,33;CL:0000393,1.51e-10,39;CL:0000211,1.51e-10,39;CL:0002319,3.87e-09,43;CL:0000221,7.91e-09,44;CL:0000133,7.91e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.67e-33!73;UBERON:0005743!1.67e-33!73;UBERON:0000073!6.59e-32!75;UBERON:0001016!6.59e-32!75;UBERON:0000033!1.48e-31!63;UBERON:0001049!8.92e-29!52;UBERON:0005068!8.92e-29!52;UBERON:0006241!8.92e-29!52;UBERON:0007135!8.92e-29!52;UBERON:0004121!3.05e-28!102;UBERON:0000924!3.05e-28!102;UBERON:0006601!3.05e-28!102;UBERON:0002346!4.30e-28!71;UBERON:0003075!4.30e-28!71;UBERON:0007284!4.30e-28!71;UBERON:0000955!1.19e-27!50;UBERON:0006238!1.19e-27!50;UBERON:0002616!9.72e-27!49;UBERON:0003056!1.19e-26!49;UBERON:0002020!1.01e-22!34;UBERON:0003080!1.28e-21!40;UBERON:0002780!8.54e-21!39;UBERON:0001890!8.54e-21!39;UBERON:0006240!8.54e-21!39;UBERON:0002791!4.54e-19!29;UBERON:0003528!4.54e-19!29;UBERON:0001893!4.54e-19!29;UBERON:0007811!1.23e-17!86;UBERON:0000153!3.89e-17!94;UBERON:0000956!2.08e-13!21;UBERON:0001869!2.08e-13!21;UBERON:0000203!2.08e-13!21;UBERON:0002619!3.85e-11!17;UBERON:0002021!1.47e-10!10;UBERON:0000411!1.47e-10!10;UBERON:0001950!1.47e-10!10;UBERON:0003076!1.44e-07!12;UBERON:0003057!1.44e-07!12;UBERON:0002420!7.03e-07!8;UBERON:0007245!7.03e-07!8;UBERON:0010009!7.03e-07!8;UBERON:0010011!7.03e-07!8;UBERON:0000454!7.03e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.32e-45,54;UBERON:0002346,4.96e-42,64;UBERON:0003075,4.96e-42,64;UBERON:0007284,4.96e-42,64;UBERON:0001049,9.50e-42,52;UBERON:0005068,9.50e-42,52;UBERON:0006241,9.50e-42,52;UBERON:0007135,9.50e-42,52;UBERON:0001017,1.28e-38,73;UBERON:0002020,5.33e-38,34;UBERON:0001016,2.69e-37,75;UBERON:0010371,1.59e-35,73;UBERON:0004121,5.23e-35,95;UBERON:0000924,5.23e-35,95;UBERON:0006601,5.23e-35,95;UBERON:0000955,9.58e-35,47;UBERON:0006238,9.58e-35,47;UBERON:0002616,3.98e-33,46;UBERON:0003056,1.04e-31,49;UBERON:0003528,8.06e-31,29;UBERON:0002791,8.06e-31,29;UBERON:0001893,8.06e-31,29;UBERON:0003080,4.72e-29,40;UBERON:0002780,1.48e-27,39;UBERON:0001890,1.48e-27,39;UBERON:0006240,1.48e-27,39;UBERON:0010314,5.74e-26,92;UBERON:0000956,8.26e-20,21;UBERON:0001869,8.26e-20,21;UBERON:0000203,8.26e-20,21;UBERON:0002021,1.54e-19,10;UBERON:0000411,1.54e-19,10;UBERON:0001950,1.54e-19,10;UBERON:0002619,3.01e-17,17;UBERON:0000025,1.21e-13,114;UBERON:0003076,1.32e-12,12;UBERON:0003057,1.32e-12,12;UBERON:0002420,3.36e-12,8;UBERON:0007245,3.36e-12,8;UBERON:0010009,3.36e-12,8;UBERON:0010011,3.36e-12,8;UBERON:0000454,3.36e-12,8;UBERON:0004111,4.09e-12,122;UBERON:0002240,1.20e-09,6;UBERON:0005174,1.20e-09,6;UBERON:0001137,1.20e-09,6;UBERON:0000483,1.01e-08,174;UBERON:0000119,1.67e-08,176;UBERON:0001948,3.37e-08,5;UBERON:0002315,3.37e-08,5;UBERON:0000369,5.25e-08,5;UBERON:0002435,5.25e-08,5;UBERON:0000204,5.25e-08,5;UBERON:0010082,5.25e-08,5;UBERON:0011216,9.67e-08,194;UBERON:0002950,2.64e-07,4;UBERON:0001891,2.64e-07,4;UBERON:0009616,2.64e-07,4;UBERON:0010286,2.64e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.23706337375356,0.528990979272033,3.80298842103708,0,0,0,0,0,0.898800331555214,0.384218305321555,1.24427534770173,0.540023753326763,1.05162480675691,4.57041575046086,4.41737081903227,0.979926393719632,0.766763768145891,4.5960939330501,17.6185409599022,9.83192503255945,8.60196586234964,2.2420668914133,1.28082701043374,5.2091337055676,6.97957497503452,6.19038871034848,5.95913166329559,9.42811473515737,5.83723891276322,3.35519002485541,0,0,0,0,0,0,0,0.448026887097336,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7606974595427,6.49284791121711,0,0,0,0,9.73639156131348,12.3525162761029,4.52355667606312,16.339486098074,16.8772201838018,8.72709787150152,10.707923362472,0,0,0,1.68353484709179,0.390361328888111,0.229902104433473,0.900310649026746,0.753524089178575,1.7009124787832,1.66547836370305,1.3118241438362,5.43277078551933,0,0.189106080167819,0.175951124163949,0,1.11218899690239,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.565947171027,3.80747065803352,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0,8.34863067936518,6.44664276257117,0,0,0,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,15.1021018718249,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.643011105094777,1.59606210278046,0.891844088010353,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,7.23158677840988,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.0897138566094757,0,0,0,0,0,0,19.2015626489803,20.714635642823,25.2074025913335,16.1541991403066,26.718218271055,25.6833925112498,20.925697507186,18.463169332193,26.2822597210839,18.6393712230655,0.207574695168353,0,0.682934423016537,0.243106717068294,0.419226325255965,0.735374033800057,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,1.13175804831646,0.561849044819294,0.768301828858431,0.746661096422973,0,0.463537303779422,0,0,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.726732083161643,0.188218760830661,0.169229215783353,0.73171189149109,0.526139422875686,1.08643291076689,0,0.593175090620871,0.591026894253381,0,0,0.578719832943424,0.999242311751784,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Cadm2 | |||
}} |
Revision as of 13:02, 13 September 2013
Short description: | p3@Cadm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cadm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -15bp_to_ENSMUST00000114292, ENSMUST00000120898, NM_001145977, NM_178721, uc007zqn.2, uc007zqo.2_5end |
EntrezGene: | Cadm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.89e-21 | 23 |
neuroblast (sensu Vertebrata) | 2.89e-21 | 23 |
neuron | 2.51e-13 | 33 |
neuronal stem cell | 2.51e-13 | 33 |
neuroblast | 2.51e-13 | 33 |
electrically signaling cell | 2.51e-13 | 33 |
electrically responsive cell | 1.51e-10 | 39 |
electrically active cell | 1.51e-10 | 39 |
neural cell | 3.87e-09 | 43 |
ectodermal cell | 7.91e-09 | 44 |
neurectodermal cell | 7.91e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.