FFCP PHASE1:Hg19::chr1:40839369..40839449,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64744 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25082 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WU79 | |||
|association_with_transcript=0bp_to_ENST00000372718,NM_022733_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_SMAP2_5end | |||
|id=chr1:40839369..40839449,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.03e-55!172;CL:0000566!1.03e-55!172;CL:0000988!4.19e-54!182;CL:0002032!1.59e-52!165;CL:0000837!1.59e-52!165;CL:0000738!1.26e-49!140;CL:0002087!1.15e-40!119;CL:0002031!1.16e-40!124;CL:0000763!6.38e-28!112;CL:0000049!6.38e-28!112;CL:0000542!1.42e-22!53;CL:0000051!1.42e-22!53;CL:0000838!1.53e-22!52;CL:0000766!1.26e-20!76;CL:0000557!1.70e-17!71;CL:0000839!4.29e-17!70;CL:0002320!4.35e-17!365;CL:0002009!4.90e-17!65;CL:0000134!1.37e-16!358;CL:0002194!3.42e-16!63;CL:0000576!3.42e-16!63;CL:0000040!3.42e-16!63;CL:0000559!3.42e-16!63;CL:0002057!4.34e-16!42;CL:0000048!6.43e-14!430;CL:0000723!1.54e-13!436;CL:0000860!2.95e-13!45;CL:0000034!2.57e-12!444;CL:0000219!6.66e-12!390;CL:0000945!1.99e-11!24;CL:0000826!1.99e-11!24;CL:0000084!4.89e-11!25;CL:0000827!4.89e-11!25;CL:0000791!4.41e-10!18;CL:0000789!4.41e-10!18;CL:0002420!4.41e-10!18;CL:0002419!4.41e-10!18;CL:0000790!4.41e-10!18;CL:0000236!1.09e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.79e-13;53!CL:0002087;3.60e-13;104!CL:0000576;1.12e-12;48!CL:0000945;1.91e-11;24!CL:0000738;3.95e-11;136!CL:0000084;4.72e-11;25!CL:0000860;6.83e-11;33!CL:0002057;6.83e-11;33!CL:0000766;2.73e-10;69!CL:0000791;4.35e-10;18!CL:0000789;4.35e-10;18!CL:0002419;4.35e-10;18!CL:0000988;4.85e-10;177!CL:0000473;6.11e-10;39!CL:0000234;6.11e-10;39!CL:0000763;1.79e-09;100!CL:0000236;2.40e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.46e-59,168;CL:0000988,4.76e-58,177;CL:0002032,9.15e-56,161;CL:0000837,9.15e-56,161;CL:0000738,3.93e-53,136;CL:0002087,4.25e-44,115;CL:0002031,5.39e-44,120;CL:0000763,1.09e-30,108;CL:0000049,1.09e-30,108;CL:0000766,1.42e-23,72;CL:0000542,1.42e-22,53;CL:0000051,1.42e-22,53;CL:0000838,1.53e-22,52;CL:0000557,2.98e-20,67;CL:0002009,6.47e-20,61;CL:0000839,7.86e-20,66;CL:0002194,4.93e-19,59;CL:0000576,4.93e-19,59;CL:0000040,4.93e-19,59;CL:0000559,4.93e-19,59;CL:0002320,2.19e-18,361;CL:0000134,7.10e-18,354;CL:0000473,1.04e-16,48;CL:0000234,1.04e-16,48;CL:0000860,4.34e-16,42;CL:0002057,4.34e-16,42;CL:0000048,5.46e-15,427;CL:0000723,1.36e-14,433;CL:0000034,2.59e-13,441;CL:0000219,6.13e-13,386;CL:0000945,1.99e-11,24;CL:0000826,1.99e-11,24;CL:0000084,4.89e-11,25;CL:0000827,4.89e-11,25;CL:0000791,4.41e-10,18;CL:0000789,4.41e-10,18;CL:0002420,4.41e-10,18;CL:0002419,4.41e-10,18;CL:0000790,4.41e-10,18;CL:0000236,1.09e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.79e-13;53!CL:0002057;1.02e-11;42!CL:0000790;4.35e-10;18!CL:0000049;2.57e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!9.97e-09!51;DOID:0060083!9.97e-09!51;DOID:1240!1.84e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.97e-09,51;DOID:0060083,9.97e-09,51;DOID:1240,1.84e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-28!102;UBERON:0003061!1.84e-28!102;UBERON:0002193!6.90e-25!112;UBERON:0007023!5.51e-18!115;UBERON:0002371!1.04e-17!80;UBERON:0001474!8.81e-17!86;UBERON:0002384!3.16e-16!375;UBERON:0002405!5.32e-16!115;UBERON:0004765!1.14e-12!101;UBERON:0001434!1.14e-12!101;UBERON:0001049!4.06e-10!57;UBERON:0005068!4.06e-10!57;UBERON:0006241!4.06e-10!57;UBERON:0007135!4.06e-10!57;UBERON:0002204!1.10e-09!167;UBERON:0000178!1.68e-09!15;UBERON:0000179!1.68e-09!15;UBERON:0000463!1.68e-09!15;UBERON:0002780!8.80e-09!41;UBERON:0001890!8.80e-09!41;UBERON:0006240!8.80e-09!41;UBERON:0003080!9.05e-09!42;UBERON:0002616!3.69e-08!59;UBERON:0001893!1.56e-07!34;UBERON:0002619!2.84e-07!22;UBERON:0002020!2.94e-07!34;UBERON:0003528!2.94e-07!34;UBERON:0001869!3.51e-07!32;UBERON:0002791!3.62e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.64e-09;15!UBERON:0000179;1.64e-09;15!UBERON:0000463;1.64e-09;15!UBERON:0002390;3.67e-09;32!UBERON:0002619;2.81e-07;22!UBERON:0001950;9.96e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.86e-31,98;UBERON:0003061,1.86e-31,98;UBERON:0002193,1.90e-27,108;UBERON:0002371,2.89e-20,76;UBERON:0002405,8.33e-20,93;UBERON:0001474,4.01e-19,82;UBERON:0007023,1.04e-17,114;UBERON:0002384,1.78e-17,371;UBERON:0004765,5.78e-17,90;UBERON:0001434,2.58e-14,100;UBERON:0002204,1.00e-10,167;UBERON:0001049,4.08e-10,56;UBERON:0005068,4.08e-10,56;UBERON:0006241,4.08e-10,56;UBERON:0007135,4.08e-10,56;UBERON:0000073,6.68e-10,53;UBERON:0002616,6.68e-10,53;UBERON:0000178,1.68e-09,15;UBERON:0000179,1.68e-09,15;UBERON:0000463,1.68e-09,15;UBERON:0002780,8.80e-09,41;UBERON:0001890,8.80e-09,41;UBERON:0003080,8.80e-09,41;UBERON:0006240,8.80e-09,41;UBERON:0003081,4.24e-08,203;UBERON:0000479,4.74e-08,773;UBERON:0001893,1.56e-07,34;UBERON:0002619,2.84e-07,22;UBERON:0003528,2.94e-07,34;UBERON:0002020,2.94e-07,34;UBERON:0001869,3.51e-07,32;UBERON:0002791,5.29e-07,32 | |||
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| |||
|short_description=p1@SMAP2 | |||
}} |
Revision as of 18:03, 10 January 2014
Short description: | p1@SMAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMAP2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000372718, NM_022733_5end |
EntrezGene: | SMAP2 |
HGNC: | 25082 |
UniProt: | Q8WU79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.86e-31 | 98 |
blood island | 1.86e-31 | 98 |
hemolymphoid system | 1.90e-27 | 108 |
bone marrow | 2.89e-20 | 76 |
immune system | 8.33e-20 | 93 |
bone element | 4.01e-19 | 82 |
adult organism | 1.04e-17 | 114 |
connective tissue | 1.78e-17 | 371 |
skeletal element | 5.78e-17 | 90 |
skeletal system | 2.58e-14 | 100 |
musculoskeletal system | 1.00e-10 | 167 |
neural tube | 4.08e-10 | 56 |
neural rod | 4.08e-10 | 56 |
future spinal cord | 4.08e-10 | 56 |
neural keel | 4.08e-10 | 56 |
regional part of nervous system | 6.68e-10 | 53 |
regional part of brain | 6.68e-10 | 53 |
blood | 1.68e-09 | 15 |
haemolymphatic fluid | 1.68e-09 | 15 |
organism substance | 1.68e-09 | 15 |
regional part of forebrain | 8.80e-09 | 41 |
forebrain | 8.80e-09 | 41 |
anterior neural tube | 8.80e-09 | 41 |
future forebrain | 8.80e-09 | 41 |
lateral plate mesoderm | 4.24e-08 | 203 |
tissue | 4.74e-08 | 773 |
telencephalon | 1.56e-07 | 34 |
regional part of cerebral cortex | 2.84e-07 | 22 |
brain grey matter | 2.94e-07 | 34 |
gray matter | 2.94e-07 | 34 |
cerebral hemisphere | 3.51e-07 | 32 |
regional part of telencephalon | 5.29e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.97e-09 | 51 |
immune system cancer | 9.97e-09 | 51 |
leukemia | 1.84e-07 | 39 |