FFCP PHASE1:Hg19::chr2:100938957..100938968,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24788 | |||
|TSSclassifier=weak | |||
|UniProt=Q1L5Z9 | |||
|association_with_transcript=226bp_to_ENST00000393437,NM_198461,uc002tal.3_5end | |||
|coexpression_cluster_id=C3186 | |||
|description=CAGE_peak_4_at_LONRF2_5end | |||
|id=chr2:100938957..100938968,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.10e-15;2!CL:0000242;8.10e-15;2!CL:0000167;1.95e-08;1!CL:0000164;1.95e-08;1!CL:0000502;1.95e-08;1!CL:0000172;1.95e-08;1!CL:0000173;1.95e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.16e-15,2;CL:0000167,2.50e-08,1;CL:0000164,2.50e-08,1;CL:0000502,2.50e-08,1;CL:0000172,2.50e-08,1;CL:0000173,2.50e-08,1;CL:0002351,2.50e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.16e-22;3!UBERON:0010122;2.53e-15;2!UBERON:0006601;3.73e-09;82!CL:0002351;1.95e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.95e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.50e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.64e-61!57;UBERON:0005068!1.64e-61!57;UBERON:0006241!1.64e-61!57;UBERON:0007135!1.64e-61!57;UBERON:0001017!9.90e-56!82;UBERON:0000073!6.82e-55!94;UBERON:0001016!6.82e-55!94;UBERON:0000955!1.60e-54!69;UBERON:0006238!1.60e-54!69;UBERON:0005743!2.88e-54!86;UBERON:0002616!2.21e-53!59;UBERON:0002780!3.68e-48!41;UBERON:0001890!3.68e-48!41;UBERON:0006240!3.68e-48!41;UBERON:0003080!9.53e-47!42;UBERON:0007023!1.02e-45!115;UBERON:0003075!2.12e-44!86;UBERON:0007284!2.12e-44!86;UBERON:0002020!8.26e-44!34;UBERON:0003528!8.26e-44!34;UBERON:0002346!2.31e-43!90;UBERON:0001893!3.10e-43!34;UBERON:0002791!8.72e-42!33;UBERON:0001869!6.94e-41!32;UBERON:0002619!4.06e-31!22;UBERON:0003056!2.55e-30!61;UBERON:0000956!2.53e-29!25;UBERON:0000203!2.53e-29!25;UBERON:0004121!2.90e-28!169;UBERON:0000924!3.46e-28!173;UBERON:0006601!3.46e-28!173;UBERON:0001950!6.07e-28!20;UBERON:0000153!1.29e-27!129;UBERON:0007811!1.29e-27!129;UBERON:0000033!1.80e-27!123;UBERON:0002420!2.37e-16!9;UBERON:0007245!2.37e-16!9;UBERON:0010009!2.37e-16!9;UBERON:0010011!2.37e-16!9;UBERON:0000454!2.37e-16!9;UBERON:0002308!4.17e-16!9;UBERON:0000125!4.17e-16!9;UBERON:0003076!2.80e-15!15;UBERON:0003057!2.80e-15!15;UBERON:0000025!1.01e-13!194;UBERON:0009663!3.81e-13!7;UBERON:0004733!2.49e-11!12;UBERON:0002028!2.49e-11!12;UBERON:0007277!2.49e-11!12;UBERON:0001871!6.08e-11!7;UBERON:0004732!2.74e-10!13;UBERON:0002298!3.90e-10!8;UBERON:0000349!8.83e-10!5;UBERON:0004111!9.19e-10!241;UBERON:0001872!1.02e-09!5;UBERON:0002021!3.53e-09!5;UBERON:0000477!4.60e-09!286;UBERON:0000369!7.76e-09!4;UBERON:0002435!7.76e-09!4;UBERON:0000204!7.76e-09!4;UBERON:0010082!7.76e-09!4;UBERON:0000483!1.09e-08!309;UBERON:0000119!1.91e-08!312;UBERON:0000475!2.08e-08!365;UBERON:0000064!6.06e-08!219;UBERON:0000200!1.36e-07!6;UBERON:0002680!2.57e-07!9;UBERON:0001895!2.57e-07!9;UBERON:0010092!2.57e-07!9;UBERON:0000062!2.84e-07!511;UBERON:0005383!4.39e-07!3;UBERON:0005382!4.39e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.06e-44;32!UBERON:0002791;1.43e-42;32!UBERON:0003528;3.48e-41;34!UBERON:0002020;3.48e-41;34!UBERON:0001893;6.90e-39;34!UBERON:0002780;6.19e-33;41!UBERON:0001890;6.19e-33;41!UBERON:0000369;5.54e-29;4!UBERON:0002435;5.54e-29;4!UBERON:0000204;5.54e-29;4!UBERON:0002619;6.85e-28;22!UBERON:0000125;7.20e-28;9!UBERON:0002308;7.20e-28;9!UBERON:0009663;1.87e-25;7!UBERON:0001950;6.84e-25;20!UBERON:0000956;1.74e-24;25!UBERON:0000203;1.74e-24;25!UBERON:0000955;2.02e-24;68!UBERON:0005383;2.64e-22;3!UBERON:0005382;2.64e-22;3!UBERON:0000073;8.17e-22;53!UBERON:0002616;8.17e-22;53!UBERON:0001017;2.38e-20;75!UBERON:0002420;9.01e-20;9!UBERON:0007245;9.01e-20;9!UBERON:0010009;9.01e-20;9!UBERON:0010011;9.01e-20;9!UBERON:0000454;9.01e-20;9!UBERON:0001873;2.53e-15;2!UBERON:0001872;6.23e-13;5!UBERON:0002680;8.23e-13;9!UBERON:0001895;8.23e-13;9!UBERON:0001016;1.37e-12;83!UBERON:0002037;2.18e-11;6!UBERON:0001870;5.94e-10;3!UBERON:0004733;1.22e-09;12!UBERON:0002028;1.22e-09;12!UBERON:0004732;6.58e-09;13!UBERON:0001874;9.79e-09;1!UBERON:0001882;1.95e-08;1!UBERON:0005403;1.95e-08;1!UBERON:0002581;4.40e-08;1!UBERON:0003112;4.40e-08;1!UBERON:0011158;4.40e-08;1!UBERON:0003128;4.40e-08;1!UBERON:0001703;4.40e-08;1!UBERON:0002241;4.40e-08;1!UBERON:0007023;3.01e-07;114!UBERON:0011216;3.99e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.36e-47,53;UBERON:0002616,2.36e-47,53;UBERON:0003528,4.43e-47,34;UBERON:0002020,4.43e-47,34;UBERON:0001049,1.15e-44,56;UBERON:0005068,1.15e-44,56;UBERON:0006241,1.15e-44,56;UBERON:0007135,1.15e-44,56;UBERON:0002791,5.94e-44,32;UBERON:0001869,5.94e-44,32;UBERON:0000955,6.85e-44,68;UBERON:0006238,6.85e-44,68;UBERON:0001893,2.80e-41,34;UBERON:0002780,8.78e-39,41;UBERON:0001890,8.78e-39,41;UBERON:0003080,8.78e-39,41;UBERON:0006240,8.78e-39,41;UBERON:0001017,2.21e-36,81;UBERON:0001016,2.01e-32,89;UBERON:0003075,1.74e-29,82;UBERON:0007284,1.74e-29,82;UBERON:0000369,5.77e-29,4;UBERON:0002435,5.77e-29,4;UBERON:0000204,5.77e-29,4;UBERON:0010082,5.77e-29,4;UBERON:0002346,5.92e-28,86;UBERON:0000125,6.90e-28,9;UBERON:0002308,6.90e-28,9;UBERON:0010371,8.19e-28,104;UBERON:0002619,1.04e-27,22;UBERON:0009663,1.88e-25,7;UBERON:0003056,2.80e-25,61;UBERON:0001950,9.98e-25,20;UBERON:0000956,2.50e-24,25;UBERON:0000203,2.50e-24,25;UBERON:0005383,2.30e-22,3;UBERON:0005382,2.30e-22,3;UBERON:0007023,1.50e-20,114;UBERON:0002420,9.03e-20,9;UBERON:0007245,9.03e-20,9;UBERON:0010009,9.03e-20,9;UBERON:0010011,9.03e-20,9;UBERON:0000454,9.03e-20,9;UBERON:0010314,6.21e-19,132;UBERON:0004121,1.13e-18,171;UBERON:0000924,1.13e-18,171;UBERON:0006601,1.13e-18,171;UBERON:0001873,2.20e-15,2;UBERON:0010122,2.20e-15,2;UBERON:0011216,3.33e-13,223;UBERON:0001872,5.63e-13,5;UBERON:0002680,8.12e-13,9;UBERON:0001895,8.12e-13,9;UBERON:0010092,8.12e-13,9;UBERON:0002037,2.22e-11,6;UBERON:0006215,2.22e-11,6;UBERON:0000025,1.79e-10,192;UBERON:0001870,9.36e-10,3;UBERON:0004733,1.20e-09,12;UBERON:0002028,1.20e-09,12;UBERON:0007277,1.20e-09,12;UBERON:0004732,6.52e-09,13;UBERON:0001874,9.79e-09,1;UBERON:0001882,2.33e-08,1;UBERON:0005403,2.33e-08,1;UBERON:0003112,3.10e-08,1;UBERON:0011158,3.10e-08,1;UBERON:0003128,3.10e-08,1;UBERON:0001703,3.10e-08,1;UBERON:0002241,3.10e-08,1;UBERON:0004761,3.10e-08,1;UBERON:0009617,3.10e-08,1;UBERON:0002581,4.41e-08,1;UBERON:0003076,9.78e-08,15;UBERON:0003057,9.78e-08,15;UBERON:0004111,1.29e-07,240;UBERON:0000483,9.57e-07,306 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0,0.276283915531148,0.755798243562828,0.409074730008619,0,0,0,0.179021174675609,0,0,0,0,2.90799823828566,0.927680981618513,5.98841394003583,0.260427761085233,0,0,0,0,0,1.03423011972439,0,0,2.65722415744152,3.85908603601305,3.05163472634166,4.97606669690511,2.36438095162838,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.19606253431774,0.167821586975843,0,0,0.421996129056054,0,0,0,0,0,0,0,0.247127877893006,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,1.22429104652196,0,0.751617097072463,0.414752765588989,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.176512253383001,0,0,0,1.07628353124994,0,0,0.426905989478705,0,1.00863292007874,0,0,0,0,0,0,0.209205692624666,0,0,2.40168115483916,0.410716136675979,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0.795229689809303,1.0896272488926,0.160753148465019,0,0,0,0,0.850493793212345,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0.542999601753713,0,0.653174720218818,0,0,0,0,0.146552233678082,0,0.387848869084652,1.19009341568421,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.732157589411779,1.001527445652,0.573409195690071,0.887432412294818,0.434674820589684,0,0,0,0,0,1.40500471742064,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0.314531883711793,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,2.31225210347254,4.25089728976755,0.159633859057151,1.02558182120378,0.756215088665154,0.829887029570615,1.29180516505481,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0.163771917510097,0,0.540300676947157,2.34323429584154,1.2401207790071,0.824405532520789,0.546974809018219,0,0,0,0,0.535701835878287,1.3451348888753,0,0.91064876540519,0,0,0,0.815636795721981,1.11813715056843,0.118193840883968,0,0.235479278551542,6.44173918655608,0,0.913158720509496,0,0,0.142953088353313,0,0.929931402945002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0,0,0,0,2.12108892391463,0.392616934229891,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,1.08786384305464,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0.267964130156178,0.829169439458779,0.827463966895162,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0.538951212639521,0,0,0.813792356631477,0,0,0 | |||
|short_description=p4@LONRF2 | |||
}} |
Revision as of 04:37, 21 January 2014
Short description: | p4@LONRF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LONRF2_5end |
Coexpression cluster: | C3186_putamen_cerebellum_acute_caudate_brain_amygdala_temporal |
Association with transcript: | 226bp_to_ENST00000393437, NM_198461, uc002tal.3_5end |
EntrezGene: | LONRF2 |
HGNC: | 24788 |
UniProt: | Q1L5Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.16e-15 | 2 |
peptide hormone secreting cell | 2.50e-08 | 1 |
enteroendocrine cell | 2.50e-08 | 1 |
type D enteroendocrine cell | 2.50e-08 | 1 |
somatostatin secreting cell | 2.50e-08 | 1 |
pancreatic D cell | 2.50e-08 | 1 |
progenitor cell of endocrine pancreas | 2.50e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.50e-08 | 1 |