FFCP PHASE1:Hg19::chr20:24450356..24450367,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79953 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15885 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H7V2 | |||
|association_with_transcript=20bp_to_BC030637_5end | |||
|coexpression_cluster_id=C1480 | |||
|description=CAGE_peak_5_at_SYNDIG1_5end | |||
|id=chr20:24450356..24450367,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.36e-25;3!UBERON:0006601;2.95e-13;82!UBERON:0005425;9.81e-10;1!UBERON:0006222;2.65e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.02e-62!94;UBERON:0001016!1.02e-62!94;UBERON:0001017!2.55e-62!82;UBERON:0001049!5.72e-61!57;UBERON:0005068!5.72e-61!57;UBERON:0006241!5.72e-61!57;UBERON:0007135!5.72e-61!57;UBERON:0005743!8.24e-61!86;UBERON:0002346!3.64e-55!90;UBERON:0000955!4.25e-54!69;UBERON:0006238!4.25e-54!69;UBERON:0002616!1.62e-52!59;UBERON:0003075!8.37e-52!86;UBERON:0007284!8.37e-52!86;UBERON:0000924!9.64e-48!173;UBERON:0006601!9.64e-48!173;UBERON:0004121!1.03e-44!169;UBERON:0001893!7.17e-39!34;UBERON:0002780!1.47e-38!41;UBERON:0001890!1.47e-38!41;UBERON:0006240!1.47e-38!41;UBERON:0002020!6.47e-38!34;UBERON:0003528!6.47e-38!34;UBERON:0003080!2.02e-37!42;UBERON:0002791!5.22e-37!33;UBERON:0007023!1.51e-36!115;UBERON:0001869!1.92e-35!32;UBERON:0002619!7.69e-35!22;UBERON:0000033!5.37e-32!123;UBERON:0001950!2.17e-31!20;UBERON:0000153!4.32e-31!129;UBERON:0007811!4.32e-31!129;UBERON:0000956!5.14e-30!25;UBERON:0000203!5.14e-30!25;UBERON:0003056!9.01e-30!61;UBERON:0003076!3.54e-25!15;UBERON:0003057!3.54e-25!15;UBERON:0004732!5.68e-22!13;UBERON:0004733!5.33e-20!12;UBERON:0002028!5.33e-20!12;UBERON:0007277!5.33e-20!12;UBERON:0002680!1.51e-15!9;UBERON:0001895!1.51e-15!9;UBERON:0010092!1.51e-15!9;UBERON:0000025!6.99e-12!194;UBERON:0002037!8.96e-12!6;UBERON:0006215!8.96e-12!6;UBERON:0001871!1.27e-11!7;UBERON:0000064!2.50e-11!219;UBERON:0002021!8.76e-11!5;UBERON:0001872!1.32e-10!5;UBERON:0000475!4.20e-10!365;UBERON:0002298!4.59e-10!8;UBERON:0000349!4.62e-10!5;UBERON:0002420!7.23e-10!9;UBERON:0007245!7.23e-10!9;UBERON:0010009!7.23e-10!9;UBERON:0010011!7.23e-10!9;UBERON:0000454!7.23e-10!9;UBERON:0002308!2.53e-09!9;UBERON:0000125!2.53e-09!9;UBERON:0000200!5.50e-09!6;UBERON:0000483!8.62e-09!309;UBERON:0000119!1.47e-08!312;UBERON:0004111!4.57e-08!241;UBERON:0000477!1.56e-07!286;UBERON:0000468!2.21e-07!659;UBERON:0002771!4.84e-07!3;UBERON:0009663!7.37e-07!7;UBERON:0002240!7.91e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.50e-36;20!UBERON:0002619;8.29e-33;22!UBERON:0000956;7.52e-29;25!UBERON:0000203;7.52e-29;25!UBERON:0001869;1.12e-28;32!UBERON:0001893;4.08e-26;34!UBERON:0002791;1.30e-24;32!UBERON:0003528;1.68e-23;34!UBERON:0002020;1.68e-23;34!UBERON:0000955;5.12e-20;68!UBERON:0002780;7.46e-20;41!UBERON:0001890;7.46e-20;41!UBERON:0001017;2.46e-19;75!UBERON:0001016;7.52e-19;83!UBERON:0000073;4.46e-18;53!UBERON:0002616;4.46e-18;53!UBERON:0001872;6.63e-15;5!UBERON:0002021;6.63e-15;5!UBERON:0002037;5.63e-13;6!UBERON:0000200;1.63e-12;6!UBERON:0004732;2.12e-10;13!UBERON:0000941;9.81e-10;1!UBERON:0001785;9.81e-10;1!UBERON:0002464;9.81e-10;1!UBERON:0004904;9.81e-10;1!UBERON:0001021;9.81e-10;1!UBERON:0007023;9.97e-10;114!UBERON:0002581;2.65e-09;1!UBERON:0002902;2.65e-09;1!UBERON:0002022;2.65e-09;1!UBERON:0002135;2.65e-09;1!UBERON:0009899;2.65e-09;1!UBERON:0007190;2.65e-09;1!UBERON:0002680;8.13e-09;9!UBERON:0001895;8.13e-09;9!UBERON:0011216;9.19e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.78e-39,81;UBERON:0001016,1.43e-38,89;UBERON:0001049,2.31e-37,56;UBERON:0005068,2.31e-37,56;UBERON:0006241,2.31e-37,56;UBERON:0007135,2.31e-37,56;UBERON:0001950,4.22e-36,20;UBERON:0000073,5.62e-35,53;UBERON:0002616,5.62e-35,53;UBERON:0000955,6.61e-34,68;UBERON:0006238,6.61e-34,68;UBERON:0002346,2.65e-33,86;UBERON:0002619,7.81e-33,22;UBERON:0001869,1.11e-32,32;UBERON:0003075,1.89e-31,82;UBERON:0007284,1.89e-31,82;UBERON:0001893,1.06e-30,34;UBERON:0002780,1.14e-29,41;UBERON:0001890,1.14e-29,41;UBERON:0003080,1.14e-29,41;UBERON:0006240,1.14e-29,41;UBERON:0000956,7.14e-29,25;UBERON:0000203,7.14e-29,25;UBERON:0007023,1.98e-27,114;UBERON:0002791,2.57e-27,32;UBERON:0003528,1.18e-25,34;UBERON:0002020,1.18e-25,34;UBERON:0010371,3.55e-24,104;UBERON:0004121,7.71e-23,171;UBERON:0000924,7.71e-23,171;UBERON:0006601,7.71e-23,171;UBERON:0003056,1.02e-22,61;UBERON:0010314,2.18e-18,132;UBERON:0001872,5.37e-15,5;UBERON:0002021,7.16e-15,5;UBERON:0011216,1.79e-13,223;UBERON:0002037,6.64e-13,6;UBERON:0006215,6.64e-13,6;UBERON:0000200,7.80e-13,6;UBERON:0004732,2.26e-10,13;UBERON:0000025,3.49e-10,192;UBERON:0000941,8.68e-10,1;UBERON:0001785,8.68e-10,1;UBERON:0002464,8.68e-10,1;UBERON:0004904,8.68e-10,1;UBERON:0001021,8.68e-10,1;UBERON:0003902,8.68e-10,1;UBERON:0005425,8.68e-10,1;UBERON:0007190,1.43e-09,1;UBERON:0002902,1.69e-09,1;UBERON:0009899,1.69e-09,1;UBERON:0002581,1.84e-09,1;UBERON:0002022,2.35e-09,1;UBERON:0002135,2.55e-09,1;UBERON:0003076,7.78e-09,15;UBERON:0003057,7.78e-09,15;UBERON:0002680,9.06e-09,9;UBERON:0001895,9.06e-09,9;UBERON:0010092,9.06e-09,9;UBERON:0004111,1.67e-07,240 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.527008714158756,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561320188866147,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0.994147647766298,0.422008249231538,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.649376687132959,1.99613798001194,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,3.05163472634166,1.21637185924347,2.65992857058193,1.09692698576986,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32952671507345,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,2.40168115483916,0.547621515567972,0,0,0,1.39641200636127,0.458320848023367,0,0,1.28767814440971,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,1.39723980313457,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70836770862748,0.751145584238999,0.573409195690071,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646948868380091,0.629063767423586,0.218419276384028,0.169732529954025,0.212574920101683,1.36329340684902,0,0,0,0,0,0,0.834979926253974,1.41696576325585,0.957803154342908,0.82046545696302,1.00828678488687,1.59061680667701,0.484426936895553,2.85538840518309,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.75597720007826,0.781078098613847,1.2401207790071,1.45856363445986,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.203909198930495,1.57854656550838,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,1.18818560130834,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,0,0.860037498908708,0,1.15585533324555,0,0,0.371995018166751,0.462175628631418,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0.413731983447581,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@SYNDIG1 | |||
}} |
Revision as of 10:36, 21 January 2014
Short description: | p5@SYNDIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SYNDIG1_5end |
Coexpression cluster: | C1480_optic_neuroectodermal_corpus_cerebellum_diencephalon_occipital_Astrocyte |
Association with transcript: | 20bp_to_BC030637_5end |
EntrezGene: | SYNDIG1 |
HGNC: | 15885 |
UniProt: | Q9H7V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data