FFCP PHASE1:Hg19::chr5:143584901..143584987,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57528 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29244 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=61bp_to_ENST00000507359,uc003lnn.1_5end | |||
|coexpression_cluster_id=C4474 | |||
|description=CAGE_peak_1_at_KCTD16_5end | |||
|id=chr5:143584901..143584987,+ | |||
|ontology_enrichment_celltype=CL:0000359!9.08e-14!32;CL:0000192!2.33e-13!42;CL:0000514!2.33e-13!42;CL:0000055!3.13e-13!180;CL:0000680!1.45e-09!57;CL:0000056!1.45e-09!57;CL:0000355!1.45e-09!57;CL:0000187!1.46e-09!54;CL:0000393!3.89e-09!60;CL:0000211!3.89e-09!60;CL:0000183!5.03e-08!59;CL:0000057!2.10e-07!75;CL:0000222!7.55e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.49e-14;32!CL:0000192;4.52e-11;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.27e-15,32;CL:0000192,1.25e-14,43;CL:0000514,1.25e-14,43;CL:0000187,8.70e-10,55;CL:0000393,9.65e-10,61;CL:0000211,9.65e-10,61;CL:0000680,1.85e-09,58;CL:0000056,1.85e-09,58;CL:0000355,1.85e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.52e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.00e-23!57;UBERON:0005068!3.00e-23!57;UBERON:0006241!3.00e-23!57;UBERON:0007135!3.00e-23!57;UBERON:0000025!1.27e-22!194;UBERON:0002780!1.83e-22!41;UBERON:0001890!1.83e-22!41;UBERON:0006240!1.83e-22!41;UBERON:0003080!1.84e-21!42;UBERON:0005743!7.21e-21!86;UBERON:0002616!1.04e-20!59;UBERON:0003075!1.47e-20!86;UBERON:0007284!1.47e-20!86;UBERON:0001869!1.53e-20!32;UBERON:0001893!1.77e-20!34;UBERON:0002020!3.11e-20!34;UBERON:0003528!3.11e-20!34;UBERON:0002791!1.07e-19!33;UBERON:0001017!1.24e-19!82;UBERON:0000073!2.47e-19!94;UBERON:0001016!2.47e-19!94;UBERON:0002619!6.44e-19!22;UBERON:0002346!6.60e-19!90;UBERON:0000955!1.43e-18!69;UBERON:0006238!1.43e-18!69;UBERON:0003056!2.69e-18!61;UBERON:0001950!1.79e-17!20;UBERON:0000956!5.22e-16!25;UBERON:0000203!5.22e-16!25;UBERON:0000483!1.46e-15!309;UBERON:0001637!1.53e-15!42;UBERON:0003509!1.53e-15!42;UBERON:0004572!1.53e-15!42;UBERON:0004111!1.53e-15!241;UBERON:0000119!6.78e-15!312;UBERON:0000477!9.62e-15!286;UBERON:0000475!3.35e-14!365;UBERON:0004573!4.24e-13!33;UBERON:0004571!4.24e-13!33;UBERON:0007023!1.24e-12!115;UBERON:0000033!9.03e-12!123;UBERON:0004872!2.16e-11!84;UBERON:0000153!2.38e-11!129;UBERON:0007811!2.38e-11!129;UBERON:0000481!5.93e-11!347;UBERON:0001981!7.80e-11!60;UBERON:0007500!7.80e-11!60;UBERON:0004537!7.80e-11!60;UBERON:0006965!7.80e-11!60;UBERON:0001134!3.17e-10!61;UBERON:0002036!3.17e-10!61;UBERON:0003082!3.17e-10!61;UBERON:0002385!9.14e-10!63;UBERON:0001015!9.14e-10!63;UBERON:0000383!9.14e-10!63;UBERON:0004121!2.38e-08!169;UBERON:0000055!3.61e-08!69;UBERON:0002049!3.93e-08!79;UBERON:0007798!3.93e-08!79;UBERON:0000924!8.27e-08!173;UBERON:0006601!8.27e-08!173;UBERON:0000468!1.16e-07!659;UBERON:0001871!2.14e-07!7;UBERON:0000947!5.02e-07!21;UBERON:0010191!5.02e-07!21;UBERON:0004290!5.74e-07!70;UBERON:0000914!6.19e-07!83;UBERON:0002329!6.19e-07!83;UBERON:0003077!6.19e-07!83;UBERON:0003059!6.19e-07!83;UBERON:0007282!6.19e-07!83;UBERON:0009618!6.19e-07!83;UBERON:0007285!6.19e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.92e-24;22!UBERON:0001869;4.76e-23;32!UBERON:0001950;5.72e-22;20!UBERON:0001893;1.64e-21;34!UBERON:0003528;2.27e-21;34!UBERON:0002020;2.27e-21;34!UBERON:0002791;2.59e-21;32!UBERON:0000956;7.44e-20;25!UBERON:0000203;7.44e-20;25!UBERON:0002780;1.13e-18;41!UBERON:0001890;1.13e-18;41!UBERON:0000073;3.43e-14;53!UBERON:0002616;3.43e-14;53!UBERON:0004573;6.06e-12;33!UBERON:0004571;6.06e-12;33!UBERON:0001017;3.52e-10;75!UBERON:0001637;4.28e-10;42!UBERON:0003509;4.28e-10;42!UBERON:0004572;4.28e-10;42!UBERON:0000955;1.56e-09;68!UBERON:0001016;9.81e-09;83!UBERON:0001871;5.04e-08;6!UBERON:0000200;9.35e-08;6!UBERON:0002420;5.35e-07;9!UBERON:0007245;5.35e-07;9!UBERON:0010009;5.35e-07;9!UBERON:0010011;5.35e-07;9!UBERON:0000454;5.35e-07;9!UBERON:0003688;7.56e-07;6!UBERON:0002358;7.56e-07;6!UBERON:0003684;7.56e-07;6!UBERON:0001178;7.56e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.38e-27,56;UBERON:0005068,5.38e-27,56;UBERON:0006241,5.38e-27,56;UBERON:0007135,5.38e-27,56;UBERON:0001869,1.14e-25,32;UBERON:0002780,1.28e-25,41;UBERON:0001890,1.28e-25,41;UBERON:0003080,1.28e-25,41;UBERON:0006240,1.28e-25,41;UBERON:0000073,2.64e-25,53;UBERON:0002616,2.64e-25,53;UBERON:0001893,7.55e-25,34;UBERON:0003075,9.49e-25,82;UBERON:0007284,9.49e-25,82;UBERON:0003528,1.53e-24,34;UBERON:0002020,1.53e-24,34;UBERON:0002619,7.97e-24,22;UBERON:0000025,1.05e-23,192;UBERON:0002791,1.64e-23,32;UBERON:0002346,1.36e-22,86;UBERON:0001017,2.98e-22,81;UBERON:0001950,5.71e-22,20;UBERON:0010314,1.45e-21,132;UBERON:0003056,1.29e-20,61;UBERON:0001016,3.71e-20,89;UBERON:0000955,3.85e-20,68;UBERON:0006238,3.85e-20,68;UBERON:0000956,7.47e-20,25;UBERON:0000203,7.47e-20,25;UBERON:0000483,6.69e-16,306;UBERON:0010371,8.67e-16,104;UBERON:0004111,1.56e-15,240;UBERON:0000119,2.23e-15,309;UBERON:0001637,1.42e-14,42;UBERON:0003509,1.42e-14,42;UBERON:0004572,1.42e-14,42;UBERON:0004573,1.45e-13,33;UBERON:0004571,1.45e-13,33;UBERON:0007023,1.90e-10,114;UBERON:0004872,4.53e-10,83;UBERON:0007500,6.90e-10,59;UBERON:0001981,6.90e-10,59;UBERON:0004537,6.90e-10,59;UBERON:0006965,6.90e-10,59;UBERON:0004121,7.37e-10,171;UBERON:0000924,7.37e-10,171;UBERON:0006601,7.37e-10,171;UBERON:0001134,2.24e-09,62;UBERON:0002036,2.24e-09,62;UBERON:0003082,2.24e-09,62;UBERON:0002385,9.64e-09,64;UBERON:0001015,9.64e-09,64;UBERON:0000383,9.64e-09,64;UBERON:0001871,4.99e-08,6;UBERON:0000200,9.36e-08,6;UBERON:0007524,1.04e-07,73;UBERON:0003077,2.38e-07,72;UBERON:0007285,2.38e-07,72;UBERON:0000055,3.43e-07,68;UBERON:0002420,5.23e-07,9;UBERON:0007245,5.23e-07,9;UBERON:0010009,5.23e-07,9;UBERON:0010011,5.23e-07,9;UBERON:0000454,5.23e-07,9;UBERON:0002329,7.29e-07,71;UBERON:0003059,7.29e-07,71;UBERON:0007282,7.29e-07,71;UBERON:0004290,7.29e-07,71;UBERON:0009618,7.29e-07,71;UBERON:0003688,7.75e-07,6;UBERON:0002358,7.75e-07,6;UBERON:0003684,7.75e-07,6;UBERON:0001178,7.75e-07,6 | |||
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| |||
|short_description=p1@KCTD16 | |||
}} |
Revision as of 08:04, 22 January 2014
Short description: | p1@KCTD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCTD16_5end |
Coexpression cluster: | C4474_occipital_medial_Smooth_insula_Mesenchymal_hippocampus_parietal |
Association with transcript: | 61bp_to_ENST00000507359, uc003lnn.1_5end |
EntrezGene: | KCTD16 |
HGNC: | 29244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.27e-15 | 32 |
smooth muscle cell | 1.25e-14 | 43 |
smooth muscle myoblast | 1.25e-14 | 43 |
muscle cell | 8.70e-10 | 55 |
electrically responsive cell | 9.65e-10 | 61 |
electrically active cell | 9.65e-10 | 61 |
muscle precursor cell | 1.85e-09 | 58 |
myoblast | 1.85e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-09 | 58 |