FFCP PHASE1:Hg19::chr16:7354337..7354363,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:7354337..7354363,+
|short_description=p@chr16:7354337..7354363,+
|description=CAGE_peak_at_chr16:7354337..7354363,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:7354337..7354363,+ | |||
|coexpression_cluster_id=C2389 | |||
|description=CAGE_peak_at_chr16:7354337..7354363,+ | |||
|id=chr16:7354337..7354363,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.13e-10;2!CL:0000242;8.13e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.13e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.07e-16;82!UBERON:0006241;3.26e-12;3!UBERON:0003057;3.26e-12;3!UBERON:0010122;2.87e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.69e-85!57;UBERON:0005068!7.69e-85!57;UBERON:0006241!7.69e-85!57;UBERON:0007135!7.69e-85!57;UBERON:0002616!1.54e-70!59;UBERON:0001017!1.64e-68!82;UBERON:0005743!1.47e-67!86;UBERON:0002780!4.88e-66!41;UBERON:0001890!4.88e-66!41;UBERON:0006240!4.88e-66!41;UBERON:0000073!5.16e-65!94;UBERON:0001016!5.16e-65!94;UBERON:0003080!2.98e-64!42;UBERON:0000955!5.66e-64!69;UBERON:0006238!5.66e-64!69;UBERON:0002020!3.54e-63!34;UBERON:0003528!3.54e-63!34;UBERON:0001893!3.87e-63!34;UBERON:0002791!9.18e-61!33;UBERON:0003075!8.38e-60!86;UBERON:0007284!8.38e-60!86;UBERON:0001869!2.66e-59!32;UBERON:0002346!1.50e-56!90;UBERON:0002619!6.14e-46!22;UBERON:0007023!7.63e-46!115;UBERON:0003056!6.09e-44!61;UBERON:0000956!1.27e-43!25;UBERON:0000203!1.27e-43!25;UBERON:0001950!2.66e-41!20;UBERON:0000033!2.45e-37!123;UBERON:0000153!1.26e-36!129;UBERON:0007811!1.26e-36!129;UBERON:0004121!3.83e-36!169;UBERON:0000924!5.76e-35!173;UBERON:0006601!5.76e-35!173;UBERON:0002420!5.25e-21!9;UBERON:0007245!5.25e-21!9;UBERON:0010009!5.25e-21!9;UBERON:0010011!5.25e-21!9;UBERON:0000454!5.25e-21!9;UBERON:0002308!8.10e-21!9;UBERON:0000125!8.10e-21!9;UBERON:0003076!1.34e-20!15;UBERON:0003057!1.34e-20!15;UBERON:0000025!3.62e-20!194;UBERON:0009663!1.40e-16!7;UBERON:0000483!3.47e-16!309;UBERON:0004111!4.40e-16!241;UBERON:0000200!5.61e-16!6;UBERON:0000119!7.00e-16!312;UBERON:0001871!3.53e-15!7;UBERON:0004733!1.50e-14!12;UBERON:0002028!1.50e-14!12;UBERON:0007277!1.50e-14!12;UBERON:0002298!8.45e-14!8;UBERON:0000477!1.37e-13!286;UBERON:0002021!1.43e-13!5;UBERON:0000475!2.04e-13!365;UBERON:0004732!2.71e-13!13;UBERON:0000349!5.17e-13!5;UBERON:0000064!9.89e-13!219;UBERON:0000369!9.62e-11!4;UBERON:0002435!9.62e-11!4;UBERON:0000204!9.62e-11!4;UBERON:0010082!9.62e-11!4;UBERON:0001872!4.25e-09!5;UBERON:0002680!5.88e-09!9;UBERON:0001895!5.88e-09!9;UBERON:0010092!5.88e-09!9;UBERON:0002771!8.74e-09!3;UBERON:0000481!1.55e-08!347;UBERON:0005383!1.97e-08!3;UBERON:0005382!1.97e-08!3;UBERON:0002240!3.74e-08!3;UBERON:0000988!6.23e-08!3;UBERON:0001896!6.70e-08!3;UBERON:0005290!6.70e-08!3;UBERON:0010096!6.70e-08!3;UBERON:0006331!1.08e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.53e-70;32!UBERON:0002619;1.66e-67;22!UBERON:0002791;7.85e-65;32!UBERON:0003528;2.78e-64;34!UBERON:0002020;2.78e-64;34!UBERON:0001893;3.69e-62;34!UBERON:0001950;5.58e-60;20!UBERON:0000956;3.92e-59;25!UBERON:0000203;3.92e-59;25!UBERON:0002780;5.32e-52;41!UBERON:0001890;5.32e-52;41!UBERON:0000073;3.28e-38;53!UBERON:0002616;3.28e-38;53!UBERON:0001017;5.24e-31;75!UBERON:0000955;1.70e-30;68!UBERON:0000200;8.35e-25;6!UBERON:0001016;1.32e-22;83!UBERON:0002021;6.20e-21;5!UBERON:0002420;6.28e-21;9!UBERON:0007245;6.28e-21;9!UBERON:0010009;6.28e-21;9!UBERON:0010011;6.28e-21;9!UBERON:0000454;6.28e-21;9!UBERON:0000349;3.31e-20;5!UBERON:0000369;1.92e-16;4!UBERON:0002435;1.92e-16;4!UBERON:0000204;1.92e-16;4!UBERON:0000125;1.47e-15;9!UBERON:0002308;1.47e-15;9!UBERON:0001871;1.73e-14;6!UBERON:0009663;3.31e-14;7!UBERON:0001872;5.17e-14;5!UBERON:0007023;2.45e-13;114!UBERON:0001870;3.06e-13;3!UBERON:0005383;1.15e-12;3!UBERON:0005382;1.15e-12;3!UBERON:0002240;3.26e-12;3!UBERON:0005174;3.26e-12;3!UBERON:0001137;3.26e-12;3!UBERON:0011216;4.54e-10;132!UBERON:0002702;1.41e-09;2!UBERON:0002771;2.10e-09;2!UBERON:0001873;2.87e-09;2!UBERON:0001954;3.18e-09;2!UBERON:0003022;3.18e-09;2!UBERON:0002421;3.18e-09;2!UBERON:0002600;3.18e-09;2!UBERON:0001876;6.37e-09;2!UBERON:0010314;1.00e-08;132!UBERON:0001897;1.69e-08;2!UBERON:0010225;1.69e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.32e-84,56;UBERON:0005068,4.32e-84,56;UBERON:0006241,4.32e-84,56;UBERON:0007135,4.32e-84,56;UBERON:0001869,2.69e-78,32;UBERON:0002780,3.10e-75,41;UBERON:0001890,3.10e-75,41;UBERON:0003080,3.10e-75,41;UBERON:0006240,3.10e-75,41;UBERON:0000073,1.78e-74,53;UBERON:0002616,1.78e-74,53;UBERON:0001893,1.89e-73,34;UBERON:0003528,2.34e-73,34;UBERON:0002020,2.34e-73,34;UBERON:0002791,3.96e-72,32;UBERON:0002619,1.47e-67,22;UBERON:0001017,4.12e-66,81;UBERON:0000955,1.84e-63,68;UBERON:0006238,1.84e-63,68;UBERON:0001016,5.23e-62,89;UBERON:0001950,4.38e-60,20;UBERON:0000956,3.52e-59,25;UBERON:0000203,3.52e-59,25;UBERON:0003075,1.91e-58,82;UBERON:0007284,1.91e-58,82;UBERON:0002346,2.27e-55,86;UBERON:0003056,3.33e-52,61;UBERON:0010371,2.57e-50,104;UBERON:0007023,4.24e-43,114;UBERON:0010314,1.99e-35,132;UBERON:0004121,3.00e-34,171;UBERON:0000924,3.00e-34,171;UBERON:0006601,3.00e-34,171;UBERON:0000200,6.66e-25,6;UBERON:0011216,4.34e-24,223;UBERON:0000025,6.73e-22,192;UBERON:0002021,5.38e-21,5;UBERON:0002420,6.68e-21,9;UBERON:0007245,6.68e-21,9;UBERON:0010009,6.68e-21,9;UBERON:0010011,6.68e-21,9;UBERON:0000454,6.68e-21,9;UBERON:0000349,4.30e-20,5;UBERON:0000369,2.04e-16,4;UBERON:0002435,2.04e-16,4;UBERON:0000204,2.04e-16,4;UBERON:0010082,2.04e-16,4;UBERON:0004111,7.91e-16,240;UBERON:0000125,1.55e-15,9;UBERON:0002308,1.55e-15,9;UBERON:0001871,1.80e-14,6;UBERON:0009663,3.46e-14,7;UBERON:0001872,5.26e-14,5;UBERON:0000483,2.18e-13,306;UBERON:0001870,2.65e-13,3;UBERON:0000119,3.59e-13,309;UBERON:0005383,1.11e-12,3;UBERON:0005382,1.11e-12,3;UBERON:0002240,3.13e-12,3;UBERON:0005174,3.13e-12,3;UBERON:0001137,3.13e-12,3;UBERON:0003076,9.44e-12,15;UBERON:0003057,9.44e-12,15;UBERON:0002702,1.30e-09,2;UBERON:0002771,1.89e-09,2;UBERON:0001873,3.38e-09,2;UBERON:0010122,3.38e-09,2;UBERON:0001954,3.67e-09,2;UBERON:0003022,3.67e-09,2;UBERON:0002421,3.67e-09,2;UBERON:0002600,3.67e-09,2;UBERON:0001876,6.50e-09,2;UBERON:0001897,1.50e-08,2;UBERON:0010225,1.50e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,3.97659059106519,2.11004124615769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,6.12269447868218,0,0,0,0,0,0,0,3.44743373241465,0,5.38237484293206,14.1718621730214,1.08536794762867,0,0.552896299656123,1.18219047581419,6.58156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.404406797884062,0,4.45102446878144,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,3.79864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,9.54275627771164,1.0896272488926,0,0,0,0,0,2.55148137963704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49063982176186,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,5.61320818549031,4.75725536684699,2.29363678276028,0.443716206147409,1.8628920882415,0,0,0,0,0,8.43002830452387,7.97065657359538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83904526531058,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,4.30335808146279,5.6678630530234,5.74681892605745,8.2046545696302,1.76450187355203,6.91572524642179,2.74508597574147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52501816943244,7.02970288752463,8.47415865654855,5.07326481551255,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.747667062745149,4.80141247008798,0,0,0.078493092850514,1.88538707899202,0,0,0,0,1.28657779517981,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,3.04121302500737,0,0,0,3.62803705259916,9.66162198826711,0,0,13.1688842981226,0,0,2.1593931382644,1.78227840196252,2.5359343655004,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,4.28346388202763,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,1.65833887891756,1.86179392551411,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,3.97659059106519,2.11004124615769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,6.12269447868218,0,0,0,0,0,0,0,3.44743373241465,0,5.38237484293206,14.1718621730214,1.08536794762867,0,0.552896299656123,1.18219047581419,6.58156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.404406797884062,0,4.45102446878144,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,3.79864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,9.54275627771164,1.0896272488926,0,0,0,0,0,2.55148137963704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49063982176186,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,5.61320818549031,4.75725536684699,2.29363678276028,0.443716206147409,1.8628920882415,0,0,0,0,0,8.43002830452387,7.97065657359538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83904526531058,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,4.30335808146279,5.6678630530234,5.74681892605745,8.2046545696302,1.76450187355203,6.91572524642179,2.74508597574147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52501816943244,7.02970288752463,8.47415865654855,5.07326481551255,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.747667062745149,4.80141247008798,0,0,0.078493092850514,1.88538707899202,0,0,0,0,1.28657779517981,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,3.04121302500737,0,0,0,3.62803705259916,9.66162198826711,0,0,13.1688842981226,0,0,2.1593931382644,1.78227840196252,2.5359343655004,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,4.28346388202763,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,1.65833887891756,1.86179392551411,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:7354337..7354363,+ | |||
}} | }} |
Latest revision as of 12:16, 25 July 2015
Short description: | p@chr16:7354337..7354363, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:7354337..7354363, + |
Coexpression cluster: | C2389_caudate_parietal_small_smallcell_occipital_merkel_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.13e-10 | 2 |