FFCP PHASE1:Hg19::chr18:54318893..54318941,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:54318893..54318941,+
|short_description=p@chr18:54318893..54318941,+
|description=CAGE_peak_at_chr18:54318893..54318941,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:54318893..54318941,+ | |||
|coexpression_cluster_id=C1402 | |||
|description=CAGE_peak_at_chr18:54318893..54318941,+ | |||
|id=chr18:54318893..54318941,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.85e-35!172;CL:0000566!6.85e-35!172;CL:0002032!2.44e-32!165;CL:0000837!2.44e-32!165;CL:0000738!3.81e-32!140;CL:0000988!7.33e-31!182;CL:0002031!3.20e-28!124;CL:0002087!1.49e-26!119;CL:0000763!1.09e-17!112;CL:0000049!1.09e-17!112;CL:0000766!1.51e-15!76;CL:0000839!1.31e-14!70;CL:0000542!4.50e-14!53;CL:0000051!4.50e-14!53;CL:0000557!4.75e-14!71;CL:0000838!1.05e-13!52;CL:0002194!1.25e-11!63;CL:0000576!1.25e-11!63;CL:0000040!1.25e-11!63;CL:0000559!1.25e-11!63;CL:0002009!1.41e-11!65;CL:0000084!1.19e-10!25;CL:0000827!1.19e-10!25;CL:0000791!6.50e-10!18;CL:0000789!6.50e-10!18;CL:0002420!6.50e-10!18;CL:0002419!6.50e-10!18;CL:0000790!6.50e-10!18;CL:0002057!5.85e-09!42;CL:0000860!8.26e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.95e-13;25!CL:0000791;5.78e-12;18!CL:0000789;5.78e-12;18!CL:0002419;5.78e-12;18!CL:0000542;3.08e-09;53!CL:0000766;6.45e-09;69!CL:0002087;1.54e-08;104!CL:0000576;6.18e-08;48!CL:0000625;6.59e-08;11!CL:0000738;8.20e-08;136!CL:0000473;4.38e-07;39!CL:0000234;4.38e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.58e-37,168;CL:0000738,9.76e-37,136;CL:0002032,5.82e-34,161;CL:0000837,5.82e-34,161;CL:0000988,1.20e-33,177;CL:0002031,5.06e-32,120;CL:0002087,1.68e-30,115;CL:0000766,1.33e-19,72;CL:0000763,1.34e-18,108;CL:0000049,1.34e-18,108;CL:0000839,3.84e-18,66;CL:0000557,6.19e-17,67;CL:0000542,1.18e-14,53;CL:0000051,1.18e-14,53;CL:0002194,2.28e-14,59;CL:0000576,2.28e-14,59;CL:0000040,2.28e-14,59;CL:0000559,2.28e-14,59;CL:0000838,3.25e-14,52;CL:0002009,7.79e-14,61;CL:0000084,7.98e-13,25;CL:0000827,7.98e-13,25;CL:0000473,1.81e-12,48;CL:0000234,1.81e-12,48;CL:0000791,6.54e-12,18;CL:0000789,6.54e-12,18;CL:0002420,6.54e-12,18;CL:0002419,6.54e-12,18;CL:0000790,6.54e-12,18;CL:0000860,3.68e-10,42;CL:0002057,3.68e-10,42;CL:0000625,7.18e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;5.78e-12;18!CL:0000051;3.08e-09;53!CL:0002057;9.31e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-38!115;UBERON:0001049!1.73e-24!57;UBERON:0005068!1.73e-24!57;UBERON:0006241!1.73e-24!57;UBERON:0007135!1.73e-24!57;UBERON:0003080!2.63e-21!42;UBERON:0002780!5.96e-21!41;UBERON:0001890!5.96e-21!41;UBERON:0006240!5.96e-21!41;UBERON:0002616!2.12e-20!59;UBERON:0002390!1.93e-18!102;UBERON:0003061!1.93e-18!102;UBERON:0001017!9.04e-18!82;UBERON:0002020!1.08e-17!34;UBERON:0003528!1.08e-17!34;UBERON:0001893!1.17e-17!34;UBERON:0002791!5.13e-17!33;UBERON:0000955!5.65e-17!69;UBERON:0006238!5.65e-17!69;UBERON:0001869!9.59e-17!32;UBERON:0005743!5.16e-16!86;UBERON:0002193!2.85e-15!112;UBERON:0002619!3.46e-15!22;UBERON:0000073!1.49e-14!94;UBERON:0001016!1.49e-14!94;UBERON:0001950!5.81e-14!20;UBERON:0000956!1.39e-12!25;UBERON:0000203!1.39e-12!25;UBERON:0003075!6.28e-12!86;UBERON:0007284!6.28e-12!86;UBERON:0002371!8.51e-12!80;UBERON:0002346!9.25e-12!90;UBERON:0001474!2.55e-09!86;UBERON:0002405!2.96e-09!115;UBERON:0003056!8.26e-09!61;UBERON:0004765!3.93e-08!101;UBERON:0001434!3.93e-08!101;UBERON:0000153!1.89e-07!129;UBERON:0007811!1.89e-07!129;UBERON:0002420!7.73e-07!9;UBERON:0007245!7.73e-07!9;UBERON:0010009!7.73e-07!9;UBERON:0010011!7.73e-07!9;UBERON:0000454!7.73e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.81e-18;22!UBERON:0002780;2.33e-18;41!UBERON:0001890;2.33e-18;41!UBERON:0003528;5.22e-18;34!UBERON:0002020;5.22e-18;34!UBERON:0001869;5.35e-18;32!UBERON:0001893;5.57e-18;34!UBERON:0002791;7.84e-18;32!UBERON:0001950;6.31e-17;20!UBERON:0000073;1.96e-15;53!UBERON:0002616;1.96e-15;53!UBERON:0000956;5.99e-15;25!UBERON:0000203;5.99e-15;25!UBERON:0007023;1.79e-12;114!UBERON:0000955;1.53e-09;68!UBERON:0001017;4.63e-09;75!UBERON:0002420;4.65e-08;9!UBERON:0007245;4.65e-08;9!UBERON:0010009;4.65e-08;9!UBERON:0010011;4.65e-08;9!UBERON:0000454;4.65e-08;9!UBERON:0001016;6.67e-08;83!UBERON:0000125;7.51e-08;9!UBERON:0002308;7.51e-08;9!UBERON:0000178;8.38e-07;15!UBERON:0000179;8.38e-07;15!UBERON:0000463;8.38e-07;15 | |||
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| ||
|short_description=p@chr18:54318893..54318941,+ | |||
}} | }} |
Latest revision as of 01:27, 26 July 2015
Short description: | p@chr18:54318893..54318941, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:54318893..54318941, + |
Coexpression cluster: | C1402_hippocampus_occipital_medial_pineal_temporal_parietal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data