FFCP PHASE1:Hg19::chr20:334400..334418,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:334400..334418,+ | |||
|description=CAGE_peak_at_chr20:334400..334418,+ | |description=CAGE_peak_at_chr20:334400..334418,+ | ||
|id=chr20:334400..334418,+ | |id=chr20:334400..334418,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002564;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,7.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003099;8.01e-18;1!UBERON:0003852;8.01e-18;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.16e-19!57;UBERON:0005068!9.16e-19!57;UBERON:0006241!9.16e-19!57;UBERON:0007135!9.16e-19!57;UBERON:0002020!2.80e-17!34;UBERON:0003528!2.80e-17!34;UBERON:0001869!3.81e-17!32;UBERON:0001893!8.56e-17!34;UBERON:0002791!2.39e-16!33;UBERON:0002780!2.71e-16!41;UBERON:0001890!2.71e-16!41;UBERON:0006240!2.71e-16!41;UBERON:0002616!5.36e-16!59;UBERON:0003080!1.17e-15!42;UBERON:0001950!2.66e-15!20;UBERON:0002619!3.01e-15!22;UBERON:0005743!6.92e-15!86;UBERON:0001017!1.60e-14!82;UBERON:0000956!3.33e-14!25;UBERON:0000203!3.33e-14!25;UBERON:0000073!3.61e-14!94;UBERON:0001016!3.61e-14!94;UBERON:0002346!1.71e-13!90;UBERON:0000955!2.04e-13!69;UBERON:0006238!2.04e-13!69;UBERON:0003075!3.41e-13!86;UBERON:0007284!3.41e-13!86;UBERON:0003056!8.83e-11!61;UBERON:0000153!2.78e-08!129;UBERON:0007811!2.78e-08!129;UBERON:0000033!3.32e-08!123;UBERON:0007023!3.79e-08!115;UBERON:0000924!7.06e-08!173;UBERON:0006601!7.06e-08!173;UBERON:0004121!1.46e-07!169;UBERON:0001871!4.74e-07!7;UBERON:0000200!7.65e-07!6 | |ontology_enrichment_uberon=UBERON:0001049!9.16e-19!57;UBERON:0005068!9.16e-19!57;UBERON:0006241!9.16e-19!57;UBERON:0007135!9.16e-19!57;UBERON:0002020!2.80e-17!34;UBERON:0003528!2.80e-17!34;UBERON:0001869!3.81e-17!32;UBERON:0001893!8.56e-17!34;UBERON:0002791!2.39e-16!33;UBERON:0002780!2.71e-16!41;UBERON:0001890!2.71e-16!41;UBERON:0006240!2.71e-16!41;UBERON:0002616!5.36e-16!59;UBERON:0003080!1.17e-15!42;UBERON:0001950!2.66e-15!20;UBERON:0002619!3.01e-15!22;UBERON:0005743!6.92e-15!86;UBERON:0001017!1.60e-14!82;UBERON:0000956!3.33e-14!25;UBERON:0000203!3.33e-14!25;UBERON:0000073!3.61e-14!94;UBERON:0001016!3.61e-14!94;UBERON:0002346!1.71e-13!90;UBERON:0000955!2.04e-13!69;UBERON:0006238!2.04e-13!69;UBERON:0003075!3.41e-13!86;UBERON:0007284!3.41e-13!86;UBERON:0003056!8.83e-11!61;UBERON:0000153!2.78e-08!129;UBERON:0007811!2.78e-08!129;UBERON:0000033!3.32e-08!123;UBERON:0007023!3.79e-08!115;UBERON:0000924!7.06e-08!173;UBERON:0006601!7.06e-08!173;UBERON:0004121!1.46e-07!169;UBERON:0001871!4.74e-07!7;UBERON:0000200!7.65e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.94e-20;20!UBERON:0002619;4.55e-18;22!UBERON:0002791;6.17e-18;32!UBERON:0001869;6.17e-18;32!UBERON:0005705;8.01e-18;1!UBERON:0008193;8.01e-18;1!UBERON:0010912;8.01e-18;1!UBERON:0002514;8.01e-18;1!UBERON:0003457;8.01e-18;1!UBERON:0008907;8.01e-18;1!UBERON:0008001;8.01e-18;1!UBERON:0007213;8.01e-18;1!UBERON:0009891;8.01e-18;1!UBERON:0007914;8.01e-18;1!UBERON:0007375;8.01e-18;1!UBERON:0003323;8.01e-18;1!UBERON:0010258;8.01e-18;1!UBERON:0005253;8.01e-18;1!UBERON:0007842;8.01e-18;1!UBERON:0002397;8.01e-18;1!UBERON:0003113;8.01e-18;1!UBERON:0003277;8.01e-18;1!UBERON:0001709;8.01e-18;1!UBERON:0002244;8.01e-18;1!UBERON:0005620;8.01e-18;1!UBERON:0010364;8.01e-18;1!UBERON:0004288;8.01e-18;1!UBERON:0000956;5.35e-16;25!UBERON:0000203;5.35e-16;25!UBERON:0003528;9.38e-15;34!UBERON:0002020;9.38e-15;34!UBERON:0002021;2.33e-14;5!UBERON:0001893;2.58e-12;34!UBERON:0000200;5.67e-12;6!UBERON:0001871;2.13e-10;6!UBERON:0002780;2.49e-10;41!UBERON:0001890;2.49e-10;41!UBERON:0002771;1.38e-09;2!UBERON:0002702;1.38e-09;2!UBERON:0001875;1.38e-09;2!UBERON:0004089;1.38e-09;2!UBERON:0006514;1.38e-09;2!UBERON:0000955;2.68e-07;68!UBERON:0002114;6.14e-07;2!UBERON:0000922;7.50e-07;49!UBERON:0001870;8.38e-07;3!UBERON:0002242;8.38e-07;3!UBERON:0001017;9.96e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.09e-19,20;UBERON:0002619,5.45e-18,22;UBERON:0005705,7.37e-18,1;UBERON:0008193,7.37e-18,1;UBERON:0010912,7.37e-18,1;UBERON:0002514,7.37e-18,1;UBERON:0003457,7.37e-18,1;UBERON:0008907,7.37e-18,1;UBERON:0008001,7.37e-18,1;UBERON:0007213,7.37e-18,1;UBERON:0009891,7.37e-18,1;UBERON:0007914,7.37e-18,1;UBERON:0009292,7.37e-18,1;UBERON:0003099,7.37e-18,1;UBERON:0007375,7.37e-18,1;UBERON:0003323,7.37e-18,1;UBERON:0010258,7.37e-18,1;UBERON:0007842,7.37e-18,1;UBERON:0009494,7.37e-18,1;UBERON:0010042,7.37e-18,1;UBERON:0010045,7.37e-18,1;UBERON:0010259,7.37e-18,1;UBERON:0010359,7.37e-18,1;UBERON:0009526,7.37e-18,1;UBERON:0002397,7.37e-18,1;UBERON:0003113,7.37e-18,1;UBERON:0003277,7.37e-18,1;UBERON:0001709,7.37e-18,1;UBERON:0004066,7.37e-18,1;UBERON:0002244,7.37e-18,1;UBERON:0005620,7.37e-18,1;UBERON:0004362,7.37e-18,1;UBERON:0010364,7.37e-18,1;UBERON:0010046,7.37e-18,1;UBERON:0005868,7.37e-18,1;UBERON:0007238,7.37e-18,1;UBERON:0004288,7.37e-18,1;UBERON:0004068,7.37e-18,1;UBERON:0010334,7.37e-18,1;UBERON:0003852,7.37e-18,1;UBERON:0010253,7.37e-18,1;UBERON:0002791,9.10e-18,32;UBERON:0001869,9.10e-18,32;UBERON:0003528,9.55e-17,34;UBERON:0002020,9.55e-17,34;UBERON:0001893,9.55e-17,34;UBERON:0000956,6.27e-16,25;UBERON:0000203,6.27e-16,25;UBERON:0002021,3.15e-14,5;UBERON:0002780,6.21e-14,41;UBERON:0001890,6.21e-14,41;UBERON:0003080,6.21e-14,41;UBERON:0006240,6.21e-14,41;UBERON:0001017,3.59e-12,81;UBERON:0000200,5.08e-12,6;UBERON:0000955,3.56e-11,68;UBERON:0006238,3.56e-11,68;UBERON:0001016,6.34e-11,89;UBERON:0000073,8.47e-11,53;UBERON:0002616,8.47e-11,53;UBERON:0001871,2.58e-10,6;UBERON:0001049,3.21e-10,56;UBERON:0005068,3.21e-10,56;UBERON:0006241,3.21e-10,56;UBERON:0007135,3.21e-10,56;UBERON:0002702,1.03e-09,2;UBERON:0005253,1.33e-09,2;UBERON:0004089,1.33e-09,2;UBERON:0002771,1.57e-09,2;UBERON:0001875,1.86e-09,2;UBERON:0006514,1.86e-09,2;UBERON:0003056,2.23e-09,61;UBERON:0003075,2.46e-09,82;UBERON:0007284,2.46e-09,82;UBERON:0002346,6.92e-09,86;UBERON:0011216,6.29e-08,223;UBERON:0010371,2.77e-07,104;UBERON:0004121,5.93e-07,171;UBERON:0000924,5.93e-07,171;UBERON:0006601,5.93e-07,171;UBERON:0002114,6.14e-07,2;UBERON:0001870,6.88e-07,3;UBERON:0002242,7.28e-07,3;UBERON:0003068,7.28e-07,3;UBERON:0002328,7.28e-07,3;UBERON:0004880,7.28e-07,3 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,1.50051156317903,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0.232420756919918,0,0.200506470303285,0,0.459257792658427,0,0.131124414959424,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0,0,0,0,0.422008249231538,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0.583209226766509,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0.591095237907095,0.658156191461918,0.10893846351899,0,0,0,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0.234264445725339,0,0,0.242780379534093,0,1.20990716048664,0.30607276163049,0,0,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0.19871461170299,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0.196854963029498,0,0,0.544813624446302,0,0.137539436597234,0,0,0,0.182248669974074,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0.339936274560377,0,0,0.129282956361551,0.66116300871345,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.22026264901963,0.3755727921195,0,0.221858103073705,0.0620964029413835,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0.457680136793847,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0.400027764663154,0,0,0,0,0,0,0.680117776536817,0,0.489473409012935,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0.256241518587947,0.345430341731199,0,0.553033744606923,0,0.265729680626726,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0.247871528518004,0,0.318004350653419,0,0,1.41070377476274,0,0,0,0.478901577171454,3.69209455633359,1.00828678488687,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0.255524855279191,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0.169927114687817,0,0.1289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| ||
|short_description=p@chr20:334400..334418,+ | |short_description=p@chr20:334400..334418,+ | ||
}} | }} |
Latest revision as of 13:18, 28 July 2015
Short description: | p@chr20:334400..334418, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:334400..334418, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 7.28e-07 | 3 |