FFCP PHASE1:Hg19::chr4:24055928..24055932,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:24055928..24055932,- | |||
|coexpression_cluster_id=C449 | |||
|description=CAGE_peak_at_chr4:24055928..24055932,- | |description=CAGE_peak_at_chr4:24055928..24055932,- | ||
|id=chr4:24055928..24055932,- | |id=chr4:24055928..24055932,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.91e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.23e-31!57;UBERON:0005068!1.23e-31!57;UBERON:0006241!1.23e-31!57;UBERON:0007135!1.23e-31!57;UBERON:0002616!4.53e-28!59;UBERON:0002780!3.22e-27!41;UBERON:0001890!3.22e-27!41;UBERON:0006240!3.22e-27!41;UBERON:0003080!2.21e-26!42;UBERON:0002020!2.50e-26!34;UBERON:0003528!2.50e-26!34;UBERON:0000073!4.68e-26!94;UBERON:0001016!4.68e-26!94;UBERON:0001869!5.66e-26!32;UBERON:0001017!1.07e-25!82;UBERON:0005743!2.73e-25!86;UBERON:0002619!3.57e-24!22;UBERON:0001893!4.55e-24!34;UBERON:0001950!9.12e-24!20;UBERON:0000955!1.34e-23!69;UBERON:0006238!1.34e-23!69;UBERON:0002791!1.26e-22!33;UBERON:0007023!1.26e-21!115;UBERON:0003075!2.69e-21!86;UBERON:0007284!2.69e-21!86;UBERON:0002346!4.35e-21!90;UBERON:0000956!9.85e-21!25;UBERON:0000203!9.85e-21!25;UBERON:0003056!5.74e-17!61;UBERON:0000153!3.53e-12!129;UBERON:0007811!3.53e-12!129;UBERON:0001871!1.20e-11!7;UBERON:0000924!1.41e-11!173;UBERON:0006601!1.41e-11!173;UBERON:0000033!1.81e-11!123;UBERON:0004121!1.91e-11!169;UBERON:0001872!1.46e-10!5;UBERON:0000200!2.52e-08!6;UBERON:0000025!3.76e-08!194;UBERON:0004732!5.56e-08!13;UBERON:0002308!4.69e-07!9;UBERON:0000125!4.69e-07!9;UBERON:0002771!9.36e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.23e-31!57;UBERON:0005068!1.23e-31!57;UBERON:0006241!1.23e-31!57;UBERON:0007135!1.23e-31!57;UBERON:0002616!4.53e-28!59;UBERON:0002780!3.22e-27!41;UBERON:0001890!3.22e-27!41;UBERON:0006240!3.22e-27!41;UBERON:0003080!2.21e-26!42;UBERON:0002020!2.50e-26!34;UBERON:0003528!2.50e-26!34;UBERON:0000073!4.68e-26!94;UBERON:0001016!4.68e-26!94;UBERON:0001869!5.66e-26!32;UBERON:0001017!1.07e-25!82;UBERON:0005743!2.73e-25!86;UBERON:0002619!3.57e-24!22;UBERON:0001893!4.55e-24!34;UBERON:0001950!9.12e-24!20;UBERON:0000955!1.34e-23!69;UBERON:0006238!1.34e-23!69;UBERON:0002791!1.26e-22!33;UBERON:0007023!1.26e-21!115;UBERON:0003075!2.69e-21!86;UBERON:0007284!2.69e-21!86;UBERON:0002346!4.35e-21!90;UBERON:0000956!9.85e-21!25;UBERON:0000203!9.85e-21!25;UBERON:0003056!5.74e-17!61;UBERON:0000153!3.53e-12!129;UBERON:0007811!3.53e-12!129;UBERON:0001871!1.20e-11!7;UBERON:0000924!1.41e-11!173;UBERON:0006601!1.41e-11!173;UBERON:0000033!1.81e-11!123;UBERON:0004121!1.91e-11!169;UBERON:0001872!1.46e-10!5;UBERON:0000200!2.52e-08!6;UBERON:0000025!3.76e-08!194;UBERON:0004732!5.56e-08!13;UBERON:0002308!4.69e-07!9;UBERON:0000125!4.69e-07!9;UBERON:0002771!9.36e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.13e-29;22!UBERON:0000956;3.65e-26;25!UBERON:0000203;3.65e-26;25!UBERON:0001950;4.93e-25;20!UBERON:0001869;1.80e-20;32!UBERON:0002791;1.68e-19;32!UBERON:0001893;1.14e-16;34!UBERON:0003528;2.95e-15;34!UBERON:0002020;2.95e-15;34!UBERON:0002780;8.21e-14;41!UBERON:0001890;8.21e-14;41!UBERON:0000997;7.02e-13;1!UBERON:0005056;7.02e-13;1!UBERON:0004176;7.02e-13;1!UBERON:0000941;9.91e-13;1!UBERON:0001785;9.91e-13;1!UBERON:0002464;9.91e-13;1!UBERON:0004904;9.91e-13;1!UBERON:0001021;9.91e-13;1!UBERON:0001282;2.46e-12;1!UBERON:0009842;2.46e-12;1!UBERON:0003704;2.46e-12;1!UBERON:0001171;2.46e-12;1!UBERON:0001172;2.46e-12;1!UBERON:0002021;6.80e-10;5!UBERON:0001872;9.69e-10;5!UBERON:0000349;9.69e-10;5!UBERON:0000073;4.12e-08;53!UBERON:0002616;4.12e-08;53!UBERON:0001871;3.35e-07;6!UBERON:0003714;5.41e-07;2!UBERON:0005162;5.41e-07;2!UBERON:0000122;5.41e-07;2!UBERON:0001016;6.72e-07;83!UBERON:0001876;8.52e-07;2!UBERON:0001954;8.52e-07;2!UBERON:0002702;8.52e-07;2!UBERON:0003022;8.52e-07;2!UBERON:0002421;8.52e-07;2!UBERON:0002600;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.27e-29,22;UBERON:0000956,4.05e-26,25;UBERON:0000203,4.05e-26,25;UBERON:0001950,4.60e-25,20;UBERON:0002791,2.06e-20,32;UBERON:0001869,2.06e-20,32;UBERON:0003528,3.35e-19,34;UBERON:0002020,3.35e-19,34;UBERON:0001893,3.35e-19,34;UBERON:0001049,5.99e-18,56;UBERON:0005068,5.99e-18,56;UBERON:0006241,5.99e-18,56;UBERON:0007135,5.99e-18,56;UBERON:0002780,7.29e-16,41;UBERON:0001890,7.29e-16,41;UBERON:0003080,7.29e-16,41;UBERON:0006240,7.29e-16,41;UBERON:0001016,1.46e-15,89;UBERON:0000073,2.19e-15,53;UBERON:0002616,2.19e-15,53;UBERON:0003075,1.47e-14,82;UBERON:0007284,1.47e-14,82;UBERON:0001017,1.67e-14,81;UBERON:0002346,8.06e-14,86;UBERON:0003056,2.66e-13,61;UBERON:0000997,7.03e-13,1;UBERON:0005056,7.03e-13,1;UBERON:0000941,8.85e-13,1;UBERON:0001785,8.85e-13,1;UBERON:0002464,8.85e-13,1;UBERON:0004904,8.85e-13,1;UBERON:0001021,8.85e-13,1;UBERON:0003902,8.85e-13,1;UBERON:0005425,8.85e-13,1;UBERON:0001282,3.85e-12,1;UBERON:0009842,3.85e-12,1;UBERON:0003704,3.85e-12,1;UBERON:0001171,3.85e-12,1;UBERON:0001172,3.85e-12,1;UBERON:0000955,1.28e-11,68;UBERON:0006238,1.28e-11,68;UBERON:0010371,3.44e-11,104;UBERON:0001872,6.51e-10,5;UBERON:0002021,6.51e-10,5;UBERON:0000349,1.16e-09,5;UBERON:0010314,1.65e-08,132;UBERON:0011216,1.58e-07,223;UBERON:0004121,2.04e-07,171;UBERON:0000924,2.04e-07,171;UBERON:0006601,2.04e-07,171;UBERON:0001871,3.56e-07,6;UBERON:0003714,5.11e-07,2;UBERON:0005162,5.11e-07,2;UBERON:0000122,5.11e-07,2;UBERON:0001876,8.06e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40669416410513,0,0,4.01138275443188,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,1.52581736317083,0.663475559587348,0,0.438770794307945,0.653630781113941,0,0.0769502585037971,1.13942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.247127877893006,0,0,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,12.1510572793828,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0.225980740780532,0,0,0.253243183823515,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,1.0896272488926,0,0,0,0,0,0.607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,1.001527445652,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,2.07524016774297,1.43581454968528,0,0.0691572524642179,0.322951291263702,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.405225507710368,1.56215619722769,1.86018116851066,0.380494861163441,0.546974809018219,0,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.460409414939944,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0.946629373159108,0.203974470572744,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.18378979906969,0.250707539292375,0,0,0,0.930896962757057,0.213233981900981,0.952257725854961,0,0,0,0,0.808468755832877,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40669416410513,0,0,4.01138275443188,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,1.52581736317083,0.663475559587348,0,0.438770794307945,0.653630781113941,0,0.0769502585037971,1.13942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.247127877893006,0,0,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,12.1510572793828,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0.225980740780532,0,0,0.253243183823515,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,1.0896272488926,0,0,0,0,0,0.607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,1.001527445652,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,2.07524016774297,1.43581454968528,0,0.0691572524642179,0.322951291263702,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.405225507710368,1.56215619722769,1.86018116851066,0.380494861163441,0.546974809018219,0,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.460409414939944,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0.946629373159108,0.203974470572744,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.18378979906969,0.250707539292375,0,0,0,0.930896962757057,0.213233981900981,0.952257725854961,0,0,0,0,0.808468755832877,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:24055928..24055932,- | |short_description=p@chr4:24055928..24055932,- | ||
}} | }} |
Latest revision as of 04:27, 30 July 2015
Short description: | p@chr4:24055928..24055932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:24055928..24055932, - |
Coexpression cluster: | C449_epidermoid_anaplastic_occipital_oral_middle_Wilms_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data