FFCP PHASE1:Mm9::chr17:27792490..27792513,+: Difference between revisions
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{{FFCP|EntrezGene=23969|HGNC=|MCL_coexpression_id=1|UniProt=Q61644|association_with_transcript=-19bp_to_ENSMUST00000045896_5end|description=CAGE_peak_3_at_Pacsin1_5end|id=chr17:27792490..27792513,+|ontology_enrichment_celltype=CL:0000540!7.70e-14!33;CL:0000047!7.70e-14!33;CL:0000031!7.70e-14!33;CL:0000404!7.70e-14!33;CL:0000117!1.57e-12!23;CL:0000337!1.57e-12!23;CL:0000393!1.05e-09!39;CL:0000211!1.05e-09!39;CL:0000221!5.86e-09!44;CL:0000133!5.86e-09!44;CL:0002319!1.28e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-19,23;CL:0000337,1.21e-19,23;CL:0000540,1.56e-13,33;CL:0000047,1.56e-13,33;CL:0000031,1.56e-13,33;CL:0000404,1.56e-13,33;CL:0000393,1.17e-10,39;CL:0000211,1.17e-10,39;CL:0002319,3.36e-09,43;CL:0000221,7.04e-09,44;CL:0000133,7.04e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!8.00e-29!86;UBERON:0001017!1.54e-27!73;UBERON:0005743!1.54e-27!73;UBERON:0000073!2.07e-27!75;UBERON:0001016!2.07e-27!75;UBERON:0000153!3.64e-27!94;UBERON:0002346!1.05e-25!71;UBERON:0003075!1.05e-25!71;UBERON:0007284!1.05e-25!71;UBERON:0001049!1.78e-25!52;UBERON:0005068!1.78e-25!52;UBERON:0006241!1.78e-25!52;UBERON:0007135!1.78e-25!52;UBERON:0000033!4.49e-25!63;UBERON:0000955!2.33e-24!50;UBERON:0006238!2.33e-24!50;UBERON:0002616!1.14e-23!49;UBERON:0004121!7.70e-23!102;UBERON:0000924!7.70e-23!102;UBERON:0006601!7.70e-23!102;UBERON:0003056!1.22e-20!49;UBERON:0003080!3.38e-20!40;UBERON:0002780!1.81e-19!39;UBERON:0001890!1.81e-19!39;UBERON:0006240!1.81e-19!39;UBERON:0002020!2.52e-19!34;UBERON:0002791!4.11e-16!29;UBERON:0003528!4.11e-16!29;UBERON:0001893!4.11e-16!29;UBERON:0000956!2.97e-11!21;UBERON:0001869!2.97e-11!21;UBERON:0000203!2.97e-11!21;UBERON:0002619!2.11e-09!17;UBERON:0002021!2.47e-09!10;UBERON:0000411!2.47e-09!10;UBERON:0001950!2.47e-09!10;UBERON:0000064!1.60e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.26e-43,54;UBERON:0001049,3.92e-40,52;UBERON:0005068,3.92e-40,52;UBERON:0006241,3.92e-40,52;UBERON:0007135,3.92e-40,52;UBERON:0001017,3.62e-38,73;UBERON:0001016,7.89e-37,75;UBERON:0002020,2.25e-34,34;UBERON:0002346,2.45e-34,64;UBERON:0003075,2.45e-34,64;UBERON:0007284,2.45e-34,64;UBERON:0000955,3.28e-33,47;UBERON:0006238,3.28e-33,47;UBERON:0002616,6.86e-32,46;UBERON:0004121,1.49e-29,95;UBERON:0000924,1.49e-29,95;UBERON:0006601,1.49e-29,95;UBERON:0010371,1.00e-28,73;UBERON:0003080,5.77e-28,40;UBERON:0003528,1.01e-27,29;UBERON:0002791,1.01e-27,29;UBERON:0001893,1.01e-27,29;UBERON:0002780,1.42e-26,39;UBERON:0001890,1.42e-26,39;UBERON:0006240,1.42e-26,39;UBERON:0003056,8.59e-25,49;UBERON:0010314,1.67e-20,92;UBERON:0002021,6.46e-18,10;UBERON:0000411,6.46e-18,10;UBERON:0001950,6.46e-18,10;UBERON:0000956,9.36e-18,21;UBERON:0001869,9.36e-18,21;UBERON:0000203,9.36e-18,21;UBERON:0002619,1.32e-17,17;UBERON:0000025,1.56e-12,114;UBERON:0003076,3.77e-12,12;UBERON:0003057,3.77e-12,12;UBERON:0002420,3.09e-11,8;UBERON:0007245,3.09e-11,8;UBERON:0010009,3.09e-11,8;UBERON:0010011,3.09e-11,8;UBERON:0000454,3.09e-11,8;UBERON:0004111,4.83e-11,122;UBERON:0011216,3.98e-10,194;UBERON:0002240,2.76e-09,6;UBERON:0005174,2.76e-09,6;UBERON:0001137,2.76e-09,6;UBERON:0000483,9.54e-09,174;UBERON:0000119,1.61e-08,176;UBERON:0001948,9.35e-08,5;UBERON:0002315,9.35e-08,5;UBERON:0002950,2.02e-07,4;UBERON:0001891,2.02e-07,4;UBERON:0009616,2.02e-07,4;UBERON:0010286,2.02e-07,4;UBERON:0000369,7.40e-07,5;UBERON:0002435,7.40e-07,5;UBERON:0000204,7.40e-07,5;UBERON:0010082,7.40e-07,5|phase1_expression=0.640595388419176,0,0,0,0,0,0,2.1950964985068,0.84473233291,0.468129052643987,1.02730780935303,0.8774937489487,2.39681021903688,2.09808965805594,0,0.202475267389826,0,0.630924330716475,0.822686601634433,0,2.12608225377674,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,1.45072428402269,3.36093799142464,0,0,0,2.22548106945558,1.05798195854407,0,0,0,0,0,0,0,0,0.725827286159344,1.4850653216486,0.630974884054146,6.56997264128748,5.74258206474195,1.46988959057945,0.670918297127655,1.83843757322004,13.2139057199266,11.3641730895817,11.366883460962,1.05509030184155,1.28082701043374,2.08365348222704,13.959149950069,10.6924895906019,9.93188610549266,4.41942878210502,3.27454865837937,2.42319279572891,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.776813650941515,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,10.5401086924157,7.95897485891129,0,0.11981512450592,0,0,10.1857634795279,3.20250421973039,3.64397621127307,10.7771078519211,15.0872119824895,9.97382613885888,8.4365456795234,0,0.248813941220186,0.758168275301024,1.89397670297827,0,0,0.180062129805349,0.452114453507145,0.476255494059295,0.384341160854549,0.749613796477831,5.95017752699736,0.215567992932842,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,6.9395683026162,2.05809224758569,0,0,0,0,0.128867461322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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:23969 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q61644 | |||
|association_with_transcript=-19bp_to_ENSMUST00000045896_5end | |||
|cluster_id=chr17:27792490..27792513,+ | |||
|description=CAGE_peak_3_at_Pacsin1_5end | |||
|id=chr17:27792490..27792513,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.70e-14!33;CL:0000047!7.70e-14!33;CL:0000031!7.70e-14!33;CL:0000404!7.70e-14!33;CL:0000117!1.57e-12!23;CL:0000337!1.57e-12!23;CL:0000393!1.05e-09!39;CL:0000211!1.05e-09!39;CL:0000221!5.86e-09!44;CL:0000133!5.86e-09!44;CL:0002319!1.28e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-19,23;CL:0000337,1.21e-19,23;CL:0000540,1.56e-13,33;CL:0000047,1.56e-13,33;CL:0000031,1.56e-13,33;CL:0000404,1.56e-13,33;CL:0000393,1.17e-10,39;CL:0000211,1.17e-10,39;CL:0002319,3.36e-09,43;CL:0000221,7.04e-09,44;CL:0000133,7.04e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!8.00e-29!86;UBERON:0001017!1.54e-27!73;UBERON:0005743!1.54e-27!73;UBERON:0000073!2.07e-27!75;UBERON:0001016!2.07e-27!75;UBERON:0000153!3.64e-27!94;UBERON:0002346!1.05e-25!71;UBERON:0003075!1.05e-25!71;UBERON:0007284!1.05e-25!71;UBERON:0001049!1.78e-25!52;UBERON:0005068!1.78e-25!52;UBERON:0006241!1.78e-25!52;UBERON:0007135!1.78e-25!52;UBERON:0000033!4.49e-25!63;UBERON:0000955!2.33e-24!50;UBERON:0006238!2.33e-24!50;UBERON:0002616!1.14e-23!49;UBERON:0004121!7.70e-23!102;UBERON:0000924!7.70e-23!102;UBERON:0006601!7.70e-23!102;UBERON:0003056!1.22e-20!49;UBERON:0003080!3.38e-20!40;UBERON:0002780!1.81e-19!39;UBERON:0001890!1.81e-19!39;UBERON:0006240!1.81e-19!39;UBERON:0002020!2.52e-19!34;UBERON:0002791!4.11e-16!29;UBERON:0003528!4.11e-16!29;UBERON:0001893!4.11e-16!29;UBERON:0000956!2.97e-11!21;UBERON:0001869!2.97e-11!21;UBERON:0000203!2.97e-11!21;UBERON:0002619!2.11e-09!17;UBERON:0002021!2.47e-09!10;UBERON:0000411!2.47e-09!10;UBERON:0001950!2.47e-09!10;UBERON:0000064!1.60e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.26e-43,54;UBERON:0001049,3.92e-40,52;UBERON:0005068,3.92e-40,52;UBERON:0006241,3.92e-40,52;UBERON:0007135,3.92e-40,52;UBERON:0001017,3.62e-38,73;UBERON:0001016,7.89e-37,75;UBERON:0002020,2.25e-34,34;UBERON:0002346,2.45e-34,64;UBERON:0003075,2.45e-34,64;UBERON:0007284,2.45e-34,64;UBERON:0000955,3.28e-33,47;UBERON:0006238,3.28e-33,47;UBERON:0002616,6.86e-32,46;UBERON:0004121,1.49e-29,95;UBERON:0000924,1.49e-29,95;UBERON:0006601,1.49e-29,95;UBERON:0010371,1.00e-28,73;UBERON:0003080,5.77e-28,40;UBERON:0003528,1.01e-27,29;UBERON:0002791,1.01e-27,29;UBERON:0001893,1.01e-27,29;UBERON:0002780,1.42e-26,39;UBERON:0001890,1.42e-26,39;UBERON:0006240,1.42e-26,39;UBERON:0003056,8.59e-25,49;UBERON:0010314,1.67e-20,92;UBERON:0002021,6.46e-18,10;UBERON:0000411,6.46e-18,10;UBERON:0001950,6.46e-18,10;UBERON:0000956,9.36e-18,21;UBERON:0001869,9.36e-18,21;UBERON:0000203,9.36e-18,21;UBERON:0002619,1.32e-17,17;UBERON:0000025,1.56e-12,114;UBERON:0003076,3.77e-12,12;UBERON:0003057,3.77e-12,12;UBERON:0002420,3.09e-11,8;UBERON:0007245,3.09e-11,8;UBERON:0010009,3.09e-11,8;UBERON:0010011,3.09e-11,8;UBERON:0000454,3.09e-11,8;UBERON:0004111,4.83e-11,122;UBERON:0011216,3.98e-10,194;UBERON:0002240,2.76e-09,6;UBERON:0005174,2.76e-09,6;UBERON:0001137,2.76e-09,6;UBERON:0000483,9.54e-09,174;UBERON:0000119,1.61e-08,176;UBERON:0001948,9.35e-08,5;UBERON:0002315,9.35e-08,5;UBERON:0002950,2.02e-07,4;UBERON:0001891,2.02e-07,4;UBERON:0009616,2.02e-07,4;UBERON:0010286,2.02e-07,4;UBERON:0000369,7.40e-07,5;UBERON:0002435,7.40e-07,5;UBERON:0000204,7.40e-07,5;UBERON:0010082,7.40e-07,5 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,2.1950964985068,0.84473233291,0.468129052643987,1.02730780935303,0.8774937489487,2.39681021903688,2.09808965805594,0,0.202475267389826,0,0.630924330716475,0.822686601634433,0,2.12608225377674,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,1.45072428402269,3.36093799142464,0,0,0,2.22548106945558,1.05798195854407,0,0,0,0,0,0,0,0,0.725827286159344,1.4850653216486,0.630974884054146,6.56997264128748,5.74258206474195,1.46988959057945,0.670918297127655,1.83843757322004,13.2139057199266,11.3641730895817,11.366883460962,1.05509030184155,1.28082701043374,2.08365348222704,13.959149950069,10.6924895906019,9.93188610549266,4.41942878210502,3.27454865837937,2.42319279572891,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.776813650941515,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,10.5401086924157,7.95897485891129,0,0.11981512450592,0,0,10.1857634795279,3.20250421973039,3.64397621127307,10.7771078519211,15.0872119824895,9.97382613885888,8.4365456795234,0,0.248813941220186,0.758168275301024,1.89397670297827,0,0,0.180062129805349,0.452114453507145,0.476255494059295,0.384341160854549,0.749613796477831,5.95017752699736,0.215567992932842,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,6.9395683026162,2.05809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,12.2018448390722,10.1974167335217,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0,0.566153061577665,0.404810701674894,0.292255857911312,1.18586333383957,4.4984984299053,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,2.38307724027652,0,0.646793418913773,0.857348140126369,0.709360934569094,1.42695054081656,0.658196082408484,0.608929898229199,0,0,0,0,0,0,0,0,0,11.4963687246516,0.512612642393558,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.605798699688886,0.914481679859998,0.604957110821043,1.07203668813728,0.481059208201647,1.16876902181569,0.226730383615211,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,10.1655331671072,17.4923589872727,13.7494923225455,17.0134650520251,14.3867329151835,11.3309084608455,15.5255175053315,20.7147753483141,17.672553950384,14.497288729051,0.207574695168353,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.576226371643824,0.229741875822453,0.476293691283074,0.579421629724277,0.192909220463705,0.824171801606613,0.294397840268795,0.685738504770831,0.354951612318675,0.476872379894642,0,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.950628796921032,0,0.830445126869219,0.29551344712669,0,0.309873682371932,0.578719832943424,1.74867404556562,0,0.214871054048298,0,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Pacsin1 | |||
}} |
Revision as of 12:32, 4 August 2015
Short description: | p3@Pacsin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pacsin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -19bp_to_ENSMUST00000045896_5end |
EntrezGene: | 23969 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.21e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-19 | 23 |
neuron | 1.56e-13 | 33 |
neuronal stem cell | 1.56e-13 | 33 |
neuroblast | 1.56e-13 | 33 |
electrically signaling cell | 1.56e-13 | 33 |
electrically responsive cell | 1.17e-10 | 39 |
electrically active cell | 1.17e-10 | 39 |
neural cell | 3.36e-09 | 43 |
ectodermal cell | 7.04e-09 | 44 |
neurectodermal cell | 7.04e-09 | 44 |