FFCP PHASE1:Hg19::chr20:3388541..3388575,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:3388541..3388575,- to FFCP PHASE1:Hg19::chr20:3388541..3388575,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25943 | |EntrezGene=25943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17721 | |HGNC=17721 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_uc010gay.1_5end | |||
|cluster_id=chr20:3388541..3388575,- | |||
|coexpression_cluster_id=C3018 | |||
|description=CAGE_peak_2_at_C20orf194_5end | |||
|id=chr20:3388541..3388575,- | |||
|ontology_enrichment_celltype=CL:0002057!2.06e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,7.12e-08,61;CL:0000473,8.79e-08,48;CL:0000234,8.79e-08,48;CL:0002194,1.02e-07,59;CL:0000576,1.02e-07,59;CL:0000040,1.02e-07,59;CL:0000559,1.02e-07,59;CL:0000557,1.17e-07,67;CL:0000860,1.92e-07,42;CL:0002057,1.92e-07,42;CL:0000839,7.13e-07,66 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.52e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-33!115;UBERON:0001049!4.16e-29!57;UBERON:0005068!4.16e-29!57;UBERON:0006241!4.16e-29!57;UBERON:0007135!4.16e-29!57;UBERON:0002616!1.43e-25!59;UBERON:0003080!3.92e-24!42;UBERON:0002780!1.26e-23!41;UBERON:0001890!1.26e-23!41;UBERON:0006240!1.26e-23!41;UBERON:0001017!2.66e-23!82;UBERON:0000955!7.08e-22!69;UBERON:0006238!7.08e-22!69;UBERON:0005743!7.77e-22!86;UBERON:0000468!9.54e-22!659;UBERON:0003075!1.85e-20!86;UBERON:0007284!1.85e-20!86;UBERON:0000073!8.48e-20!94;UBERON:0001016!8.48e-20!94;UBERON:0001893!1.26e-19!34;UBERON:0002020!1.42e-19!34;UBERON:0003528!1.42e-19!34;UBERON:0002346!2.49e-19!90;UBERON:0000062!3.28e-19!511;UBERON:0000467!3.44e-19!625;UBERON:0002791!5.05e-19!33;UBERON:0000480!9.30e-19!626;UBERON:0001869!1.96e-18!32;UBERON:0004121!7.54e-16!169;UBERON:0002619!2.37e-15!22;UBERON:0000924!2.45e-15!173;UBERON:0006601!2.45e-15!173;UBERON:0003056!5.00e-15!61;UBERON:0000922!1.77e-14!612;UBERON:0000033!1.92e-14!123;UBERON:0001950!4.24e-14!20;UBERON:0000956!4.85e-14!25;UBERON:0000203!4.85e-14!25;UBERON:0002050!1.19e-13!605;UBERON:0005423!1.19e-13!605;UBERON:0000153!1.26e-13!129;UBERON:0007811!1.26e-13!129;UBERON:0000923!2.34e-13!604;UBERON:0005291!2.34e-13!604;UBERON:0006598!2.34e-13!604;UBERON:0002532!2.34e-13!604;UBERON:0000475!5.69e-11!365;UBERON:0004111!2.20e-08!241;UBERON:0000025!5.50e-08!194;UBERON:0002420!3.45e-07!9;UBERON:0007245!3.45e-07!9;UBERON:0010009!3.45e-07!9;UBERON:0010011!3.45e-07!9;UBERON:0000454!3.45e-07!9;UBERON:0002308!4.72e-07!9;UBERON:0000125!4.72e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.07e-17;41!UBERON:0001890;1.07e-17;41!UBERON:0001893;2.35e-17;34!UBERON:0003528;2.88e-17;34!UBERON:0002020;2.88e-17;34!UBERON:0001869;3.71e-17;32!UBERON:0002791;4.00e-17;32!UBERON:0000073;2.79e-16;53!UBERON:0002616;2.79e-16;53!UBERON:0002619;1.39e-15;22!UBERON:0000956;1.69e-14;25!UBERON:0000203;1.69e-14;25!UBERON:0001950;2.61e-14;20!UBERON:0001017;6.02e-11;75!UBERON:0000955;7.25e-11;68!UBERON:0007023;9.91e-10;114!UBERON:0001016;3.56e-09;83!UBERON:0002420;2.61e-07;9!UBERON:0007245;2.61e-07;9!UBERON:0010009;2.61e-07;9!UBERON:0010011;2.61e-07;9!UBERON:0000454;2.61e-07;9!UBERON:0000125;3.56e-07;9!UBERON:0002308;3.56e-07;9 | |||
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| ||
|short_description=p2@C20orf194 | |||
}} | }} |
Latest revision as of 19:50, 15 September 2015
Short description: | p2@C20orf194 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C20orf194_5end |
Coexpression cluster: | C3018_optic_cerebellum_globus_caudate_occipital_hippocampus_medial |
Association with transcript: | 11bp_to_uc010gay.1_5end |
EntrezGene: | C20orf194 |
HGNC: | 17721 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 7.12e-08 | 61 |
defensive cell | 8.79e-08 | 48 |
phagocyte | 8.79e-08 | 48 |
monopoietic cell | 1.02e-07 | 59 |
monocyte | 1.02e-07 | 59 |
monoblast | 1.02e-07 | 59 |
promonocyte | 1.02e-07 | 59 |
granulocyte monocyte progenitor cell | 1.17e-07 | 67 |
classical monocyte | 1.92e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-07 | 42 |
myeloid lineage restricted progenitor cell | 7.13e-07 | 66 |