FFCP PHASE1:Hg19::chr2:100938957..100938968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164832 | |EntrezGene=164832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24788 | |HGNC=24788 | ||
|TSSclassifier=strong | |||
|UniProt=Q1L5Z9 | |UniProt=Q1L5Z9 | ||
|association_with_transcript=226bp_to_ENST00000393437,NM_198461,uc002tal.3_5end | |association_with_transcript=226bp_to_ENST00000393437,NM_198461,uc002tal.3_5end | ||
|cluster_id=chr2:100938957..100938968,- | |||
|coexpression_cluster_id=C3186 | |coexpression_cluster_id=C3186 | ||
|description=CAGE_peak_4_at_LONRF2_5end | |description=CAGE_peak_4_at_LONRF2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.10e-15;2!CL:0000242;8.10e-15;2!CL:0000167;1.95e-08;1!CL:0000164;1.95e-08;1!CL:0000502;1.95e-08;1!CL:0000172;1.95e-08;1!CL:0000173;1.95e-08;1 | |ontology_enrichment_celltype_v019=CL:0000123;8.10e-15;2!CL:0000242;8.10e-15;2!CL:0000167;1.95e-08;1!CL:0000164;1.95e-08;1!CL:0000502;1.95e-08;1!CL:0000172;1.95e-08;1!CL:0000173;1.95e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.16e-15,2;CL:0000167,2.50e-08,1;CL:0000164,2.50e-08,1;CL:0000502,2.50e-08,1;CL:0000172,2.50e-08,1;CL:0000173,2.50e-08,1;CL:0002351,2.50e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.16e-22;3!UBERON:0010122;2.53e-15;2!UBERON:0006601;3.73e-09;82!CL:0002351;1.95e-08;1 | |ontology_enrichment_development_v019=UBERON:0006215;3.16e-22;3!UBERON:0010122;2.53e-15;2!UBERON:0006601;3.73e-09;82!CL:0002351;1.95e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;1.95e-08;1 | |ontology_enrichment_disease_v019=DOID:4430;1.95e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,2.50e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.64e-61!57;UBERON:0005068!1.64e-61!57;UBERON:0006241!1.64e-61!57;UBERON:0007135!1.64e-61!57;UBERON:0001017!9.90e-56!82;UBERON:0000073!6.82e-55!94;UBERON:0001016!6.82e-55!94;UBERON:0000955!1.60e-54!69;UBERON:0006238!1.60e-54!69;UBERON:0005743!2.88e-54!86;UBERON:0002616!2.21e-53!59;UBERON:0002780!3.68e-48!41;UBERON:0001890!3.68e-48!41;UBERON:0006240!3.68e-48!41;UBERON:0003080!9.53e-47!42;UBERON:0007023!1.02e-45!115;UBERON:0003075!2.12e-44!86;UBERON:0007284!2.12e-44!86;UBERON:0002020!8.26e-44!34;UBERON:0003528!8.26e-44!34;UBERON:0002346!2.31e-43!90;UBERON:0001893!3.10e-43!34;UBERON:0002791!8.72e-42!33;UBERON:0001869!6.94e-41!32;UBERON:0002619!4.06e-31!22;UBERON:0003056!2.55e-30!61;UBERON:0000956!2.53e-29!25;UBERON:0000203!2.53e-29!25;UBERON:0004121!2.90e-28!169;UBERON:0000924!3.46e-28!173;UBERON:0006601!3.46e-28!173;UBERON:0001950!6.07e-28!20;UBERON:0000153!1.29e-27!129;UBERON:0007811!1.29e-27!129;UBERON:0000033!1.80e-27!123;UBERON:0002420!2.37e-16!9;UBERON:0007245!2.37e-16!9;UBERON:0010009!2.37e-16!9;UBERON:0010011!2.37e-16!9;UBERON:0000454!2.37e-16!9;UBERON:0002308!4.17e-16!9;UBERON:0000125!4.17e-16!9;UBERON:0003076!2.80e-15!15;UBERON:0003057!2.80e-15!15;UBERON:0000025!1.01e-13!194;UBERON:0009663!3.81e-13!7;UBERON:0004733!2.49e-11!12;UBERON:0002028!2.49e-11!12;UBERON:0007277!2.49e-11!12;UBERON:0001871!6.08e-11!7;UBERON:0004732!2.74e-10!13;UBERON:0002298!3.90e-10!8;UBERON:0000349!8.83e-10!5;UBERON:0004111!9.19e-10!241;UBERON:0001872!1.02e-09!5;UBERON:0002021!3.53e-09!5;UBERON:0000477!4.60e-09!286;UBERON:0000369!7.76e-09!4;UBERON:0002435!7.76e-09!4;UBERON:0000204!7.76e-09!4;UBERON:0010082!7.76e-09!4;UBERON:0000483!1.09e-08!309;UBERON:0000119!1.91e-08!312;UBERON:0000475!2.08e-08!365;UBERON:0000064!6.06e-08!219;UBERON:0000200!1.36e-07!6;UBERON:0002680!2.57e-07!9;UBERON:0001895!2.57e-07!9;UBERON:0010092!2.57e-07!9;UBERON:0000062!2.84e-07!511;UBERON:0005383!4.39e-07!3;UBERON:0005382!4.39e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.64e-61!57;UBERON:0005068!1.64e-61!57;UBERON:0006241!1.64e-61!57;UBERON:0007135!1.64e-61!57;UBERON:0001017!9.90e-56!82;UBERON:0000073!6.82e-55!94;UBERON:0001016!6.82e-55!94;UBERON:0000955!1.60e-54!69;UBERON:0006238!1.60e-54!69;UBERON:0005743!2.88e-54!86;UBERON:0002616!2.21e-53!59;UBERON:0002780!3.68e-48!41;UBERON:0001890!3.68e-48!41;UBERON:0006240!3.68e-48!41;UBERON:0003080!9.53e-47!42;UBERON:0007023!1.02e-45!115;UBERON:0003075!2.12e-44!86;UBERON:0007284!2.12e-44!86;UBERON:0002020!8.26e-44!34;UBERON:0003528!8.26e-44!34;UBERON:0002346!2.31e-43!90;UBERON:0001893!3.10e-43!34;UBERON:0002791!8.72e-42!33;UBERON:0001869!6.94e-41!32;UBERON:0002619!4.06e-31!22;UBERON:0003056!2.55e-30!61;UBERON:0000956!2.53e-29!25;UBERON:0000203!2.53e-29!25;UBERON:0004121!2.90e-28!169;UBERON:0000924!3.46e-28!173;UBERON:0006601!3.46e-28!173;UBERON:0001950!6.07e-28!20;UBERON:0000153!1.29e-27!129;UBERON:0007811!1.29e-27!129;UBERON:0000033!1.80e-27!123;UBERON:0002420!2.37e-16!9;UBERON:0007245!2.37e-16!9;UBERON:0010009!2.37e-16!9;UBERON:0010011!2.37e-16!9;UBERON:0000454!2.37e-16!9;UBERON:0002308!4.17e-16!9;UBERON:0000125!4.17e-16!9;UBERON:0003076!2.80e-15!15;UBERON:0003057!2.80e-15!15;UBERON:0000025!1.01e-13!194;UBERON:0009663!3.81e-13!7;UBERON:0004733!2.49e-11!12;UBERON:0002028!2.49e-11!12;UBERON:0007277!2.49e-11!12;UBERON:0001871!6.08e-11!7;UBERON:0004732!2.74e-10!13;UBERON:0002298!3.90e-10!8;UBERON:0000349!8.83e-10!5;UBERON:0004111!9.19e-10!241;UBERON:0001872!1.02e-09!5;UBERON:0002021!3.53e-09!5;UBERON:0000477!4.60e-09!286;UBERON:0000369!7.76e-09!4;UBERON:0002435!7.76e-09!4;UBERON:0000204!7.76e-09!4;UBERON:0010082!7.76e-09!4;UBERON:0000483!1.09e-08!309;UBERON:0000119!1.91e-08!312;UBERON:0000475!2.08e-08!365;UBERON:0000064!6.06e-08!219;UBERON:0000200!1.36e-07!6;UBERON:0002680!2.57e-07!9;UBERON:0001895!2.57e-07!9;UBERON:0010092!2.57e-07!9;UBERON:0000062!2.84e-07!511;UBERON:0005383!4.39e-07!3;UBERON:0005382!4.39e-07!3 | ||
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|short_description=p4@LONRF2 | |short_description=p4@LONRF2 | ||
}} | }} |
Latest revision as of 23:05, 15 September 2015
Short description: | p4@LONRF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LONRF2_5end |
Coexpression cluster: | C3186_putamen_cerebellum_acute_caudate_brain_amygdala_temporal |
Association with transcript: | 226bp_to_ENST00000393437, NM_198461, uc002tal.3_5end |
EntrezGene: | LONRF2 |
HGNC: | 24788 |
UniProt: | Q1L5Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.16e-15 | 2 |
peptide hormone secreting cell | 2.50e-08 | 1 |
enteroendocrine cell | 2.50e-08 | 1 |
type D enteroendocrine cell | 2.50e-08 | 1 |
somatostatin secreting cell | 2.50e-08 | 1 |
pancreatic D cell | 2.50e-08 | 1 |
progenitor cell of endocrine pancreas | 2.50e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.50e-08 | 1 |