FFCP PHASE1:Hg19::chr20:42574529..42574563,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84969 | |EntrezGene=84969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16095 | |HGNC=16095 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NM4 | |UniProt=Q96NM4 | ||
|association_with_transcript=0bp_to_NM_001098798,uc002xlf.3_5end | |association_with_transcript=0bp_to_NM_001098798,uc002xlf.3_5end | ||
|cluster_id=chr20:42574529..42574563,+ | |||
|description=CAGE_peak_3_at_TOX2_5end | |description=CAGE_peak_3_at_TOX2_5end | ||
|id=chr20:42574529..42574563,+ | |id=chr20:42574529..42574563,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.98e-11;3!CL:0000149;1.11e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.68e-11,3;CL:0000149,9.84e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.00e-19;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.97e-53!57;UBERON:0005068!4.97e-53!57;UBERON:0006241!4.97e-53!57;UBERON:0007135!4.97e-53!57;UBERON:0002780!2.35e-51!41;UBERON:0001890!2.35e-51!41;UBERON:0006240!2.35e-51!41;UBERON:0003080!7.36e-50!42;UBERON:0005743!1.74e-46!86;UBERON:0002346!2.56e-46!90;UBERON:0002616!7.49e-46!59;UBERON:0000073!3.27e-44!94;UBERON:0001016!3.27e-44!94;UBERON:0002020!1.12e-43!34;UBERON:0003528!1.12e-43!34;UBERON:0001893!1.81e-43!34;UBERON:0000955!4.55e-43!69;UBERON:0006238!4.55e-43!69;UBERON:0001017!5.29e-43!82;UBERON:0003075!1.02e-42!86;UBERON:0007284!1.02e-42!86;UBERON:0002791!9.41e-42!33;UBERON:0003056!4.40e-41!61;UBERON:0001869!1.71e-40!32;UBERON:0007023!4.61e-38!115;UBERON:0002619!1.80e-35!22;UBERON:0000956!4.43e-33!25;UBERON:0000203!4.43e-33!25;UBERON:0000153!1.61e-32!129;UBERON:0007811!1.61e-32!129;UBERON:0001950!2.25e-32!20;UBERON:0000033!2.26e-30!123;UBERON:0000924!1.26e-25!173;UBERON:0006601!1.26e-25!173;UBERON:0004121!4.26e-23!169;UBERON:0002308!7.15e-12!9;UBERON:0000125!7.15e-12!9;UBERON:0000200!9.50e-12!6;UBERON:0002420!1.29e-11!9;UBERON:0007245!1.29e-11!9;UBERON:0010009!1.29e-11!9;UBERON:0010011!1.29e-11!9;UBERON:0000454!1.29e-11!9;UBERON:0001871!4.84e-11!7;UBERON:0000025!8.02e-11!194;UBERON:0002298!1.25e-10!8;UBERON:0000477!7.40e-10!286;UBERON:0001872!7.65e-10!5;UBERON:0002021!1.07e-09!5;UBERON:0000119!1.39e-09!312;UBERON:0000349!1.96e-09!5;UBERON:0000481!2.33e-09!347;UBERON:0000483!2.47e-09!309;UBERON:0001894!4.01e-09!7;UBERON:0006222!4.01e-09!7;UBERON:0004111!9.78e-09!241;UBERON:0009663!1.35e-08!7;UBERON:0000475!1.59e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.70e-59;22!UBERON:0001950;6.95e-59;20!UBERON:0001893;1.40e-52;34!UBERON:0000956;7.54e-52;25!UBERON:0000203;7.54e-52;25!UBERON:0003528;5.21e-49;34!UBERON:0002020;5.21e-49;34!UBERON:0001869;1.54e-47;32!UBERON:0002791;3.17e-46;32!UBERON:0002780;9.35e-43;41!UBERON:0001890;9.35e-43;41!UBERON:0000073;3.60e-38;53!UBERON:0002616;3.60e-38;53!UBERON:0000955;1.64e-25;68!UBERON:0001017;7.34e-25;75!UBERON:0000200;2.21e-22;6!UBERON:0001016;1.38e-19;83!UBERON:0001872;1.69e-18;5!UBERON:0001871;5.33e-18;6!UBERON:0002298;3.13e-15;6!UBERON:0002021;3.38e-12;5!UBERON:0001870;4.01e-12;3!UBERON:0000988;1.05e-11;3!UBERON:0000349;1.19e-11;5!UBERON:0007023;1.49e-11;114!UBERON:0001781;1.98e-11;3!UBERON:0001782;1.98e-11;3!UBERON:0000125;7.04e-10;9!UBERON:0002308;7.04e-10;9!UBERON:0002420;1.77e-09;9!UBERON:0007245;1.77e-09;9!UBERON:0010009;1.77e-09;9!UBERON:0010011;1.77e-09;9!UBERON:0000454;1.77e-09;9!UBERON:0002370;5.26e-09;2!UBERON:0005058;5.26e-09;2!UBERON:0009113;5.26e-09;2!UBERON:0011216;1.06e-08;132!UBERON:0002148;1.09e-08;2!UBERON:0006331;1.09e-08;2!UBERON:0009662;1.09e-08;2!UBERON:0002702;1.31e-08;2!UBERON:0002771;2.51e-08;2!UBERON:0001876;6.45e-08;2!UBERON:0004733;1.87e-07;12!UBERON:0002028;1.87e-07;12!UBERON:0000966;5.04e-07;5!UBERON:0005388;5.04e-07;5!UBERON:0001802;5.04e-07;5!UBERON:0004732;7.44e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.55e-66,56;UBERON:0005068,3.55e-66,56;UBERON:0006241,3.55e-66,56;UBERON:0007135,3.55e-66,56;UBERON:0000073,3.76e-66,53;UBERON:0002616,3.76e-66,53;UBERON:0002780,1.06e-61,41;UBERON:0001890,1.06e-61,41;UBERON:0003080,1.06e-61,41;UBERON:0006240,1.06e-61,41;UBERON:0000955,1.77e-59,68;UBERON:0006238,1.77e-59,68;UBERON:0002619,1.94e-59,22;UBERON:0003528,2.49e-59,34;UBERON:0002020,2.49e-59,34;UBERON:0001950,5.28e-59,20;UBERON:0001893,5.55e-59,34;UBERON:0002346,2.59e-55,86;UBERON:0001017,8.95e-55,81;UBERON:0001869,2.62e-53,32;UBERON:0002791,6.82e-53,32;UBERON:0000956,5.66e-52,25;UBERON:0000203,5.66e-52,25;UBERON:0003075,1.29e-51,82;UBERON:0007284,1.29e-51,82;UBERON:0001016,2.16e-51,89;UBERON:0003056,3.15e-49,61;UBERON:0010371,6.76e-39,104;UBERON:0007023,1.03e-37,114;UBERON:0004121,9.63e-33,171;UBERON:0000924,9.63e-33,171;UBERON:0006601,9.63e-33,171;UBERON:0010314,1.07e-30,132;UBERON:0011216,1.36e-22,223;UBERON:0000200,2.82e-22,6;UBERON:0001872,2.15e-18,5;UBERON:0001871,4.38e-18,6;UBERON:0002298,3.23e-15,6;UBERON:0000025,1.05e-14,192;UBERON:0002021,2.68e-12,5;UBERON:0001870,4.16e-12,3;UBERON:0004111,6.46e-12,240;UBERON:0000349,8.75e-12,5;UBERON:0000988,9.40e-12,3;UBERON:0001782,1.68e-11,3;UBERON:0005424,1.68e-11,3;UBERON:0000483,1.56e-10,306;UBERON:0000119,2.43e-10,309;UBERON:0000125,8.95e-10,9;UBERON:0002308,8.95e-10,9;UBERON:0002420,1.91e-09,9;UBERON:0007245,1.91e-09,9;UBERON:0010009,1.91e-09,9;UBERON:0010011,1.91e-09,9;UBERON:0000454,1.91e-09,9;UBERON:0001781,9.84e-09,4;UBERON:0002148,1.11e-08,2;UBERON:0006331,1.11e-08,2;UBERON:0009662,1.11e-08,2;UBERON:0002702,1.34e-08,2;UBERON:0002771,2.91e-08,2;UBERON:0003076,3.95e-08,15;UBERON:0003057,3.95e-08,15;UBERON:0001876,4.84e-08,2;UBERON:0004733,1.90e-07,12;UBERON:0002028,1.90e-07,12;UBERON:0007277,1.90e-07,12;UBERON:0004732,7.54e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,1.53870075069834,6.56029291399411,2.92840555197873,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,47.7361768867859,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.82870241333667,0,0,0,0,3.31540698637377,0,0,0,0,0,0,0,0,0,0,5.81599647657131,3.9890282209596,1.99613798001194,0,0,0,0.796554137998498,0,0,0,0,0.173624994933292,0,0.60298219312704,0,0,0,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,1.28062152663286,0.802577647298789,9.83910672046424,0,0,0,0,0,1.53036380815245,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,6.52101198345551,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,1.09524303113594,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,3.97614844904652,0.953423842781029,0,0,0,0,0,6.74320078904074,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,5.55916712354667,7.66949090107602,0,0,0.213574825135389,0.314408610199332,0,0,5.3355140612445,0,0,0,0,0,0,0,8.86068179966986,5.00307686098049,3.505346059782,1.14681839138014,0.221858103073705,9.7491352617972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,2.21213497842769,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,56.8603975345984,0.850299680406731,0,2.79322458986622,0,0,0,0,0,3.85375350578757,5.6678630530234,1.91560630868582,5.53814183450038,0.756215088665154,10.0969588597758,3.39098855826887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.01084503103712,7.81078098613847,2.68692835451539,4.88301738493082,1.09394961803644,0.548257766857182,0,25.501330432145,0.255524855279191,0.535701835878287,0,0.606965604236632,3.64259506162076,0,0,0,1.56330385846713,10.0632343551159,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.588925401344836,0,1.2679671827502,0,0.0939839179798536,0.773494655682926,0,0.178553938605658,0,0,0,0.458729283404541,1.00337708206016,0.157771562193185,7.88701286214611,0.872701380680755,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,18.2417276680931,0.724030971033267,0,0.476128862927481,16.1472274590015,8.19386228705324,0,0.0636471582781649,0.202117188958219,0,0,2.08791364345221,0,0,0,0,0,0.269475606319761,0,0,0.406896178315738,0,1.61019034872821,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,1.53870075069834,6.56029291399411,2.92840555197873,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,47.7361768867859,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.82870241333667,0,0,0,0,3.31540698637377,0,0,0,0,0,0,0,0,0,0,5.81599647657131,3.9890282209596,1.99613798001194,0,0,0,0.796554137998498,0,0,0,0,0.173624994933292,0,0.60298219312704,0,0,0,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,1.28062152663286,0.802577647298789,9.83910672046424,0,0,0,0,0,1.53036380815245,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,6.52101198345551,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,1.09524303113594,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,3.97614844904652,0.953423842781029,0,0,0,0,0,6.74320078904074,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,5.55916712354667,7.66949090107602,0,0,0.213574825135389,0.314408610199332,0,0,5.3355140612445,0,0,0,0,0,0,0,8.86068179966986,5.00307686098049,3.505346059782,1.14681839138014,0.221858103073705,9.7491352617972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,2.21213497842769,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,56.8603975345984,0.850299680406731,0,2.79322458986622,0,0,0,0,0,3.85375350578757,5.6678630530234,1.91560630868582,5.53814183450038,0.756215088665154,10.0969588597758,3.39098855826887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.01084503103712,7.81078098613847,2.68692835451539,4.88301738493082,1.09394961803644,0.548257766857182,0,25.501330432145,0.255524855279191,0.535701835878287,0,0.606965604236632,3.64259506162076,0,0,0,1.56330385846713,10.0632343551159,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.588925401344836,0,1.2679671827502,0,0.0939839179798536,0.773494655682926,0,0.178553938605658,0,0,0,0.458729283404541,1.00337708206016,0.157771562193185,7.88701286214611,0.872701380680755,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,18.2417276680931,0.724030971033267,0,0.476128862927481,16.1472274590015,8.19386228705324,0,0.0636471582781649,0.202117188958219,0,0,2.08791364345221,0,0,0,0,0,0.269475606319761,0,0,0.406896178315738,0,1.61019034872821,0 | ||
|short_description=p3@TOX2 | |short_description=p3@TOX2 | ||
}} | }} |
Latest revision as of 07:25, 16 September 2015
Short description: | p3@TOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TOX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001098798, uc002xlf.3_5end |
EntrezGene: | TOX2 |
HGNC: | 16095 |
UniProt: | Q96NM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.68e-11 | 3 |
visual pigment cell | 9.84e-09 | 4 |