FFCP PHASE1:Hg19::chr9:139876037..139876053,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401562 | |EntrezGene=401562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34436 | |HGNC=34436 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3E7 | |UniProt=F2Z3E7 | ||
|association_with_transcript=-302bp_to_ENST00000482657_5end | |association_with_transcript=-302bp_to_ENST00000482657_5end | ||
|cluster_id=chr9:139876037..139876053,+ | |||
|coexpression_cluster_id=C485 | |||
|description=CAGE_peak_3_at_LCNL1_5end | |description=CAGE_peak_3_at_LCNL1_5end | ||
|id=chr9:139876037..139876053,+ | |id=chr9:139876037..139876053,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000669;5.74e-10;4!CL:0002575;9.68e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,5.41e-10,4;CL:0002575,9.70e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.78e-13;82!UBERON:0006241;9.10e-13;3!UBERON:0003057;9.10e-13;3!UBERON:0007297;1.53e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;3.24e-20;41!UBERON:0001890;3.24e-20;41!UBERON:0000073;8.39e-19;53!UBERON:0002616;8.39e-19;53!UBERON:0003528;2.10e-18;34!UBERON:0002020;2.10e-18;34!UBERON:0007023;4.95e-17;114!UBERON:0002791;1.72e-16;32!UBERON:0001893;3.62e-16;34!UBERON:0000125;1.29e-15;9!UBERON:0002308;1.29e-15;9!UBERON:0001016;1.38e-15;83!UBERON:0001017;3.72e-15;75!UBERON:0001869;9.11e-15;32!UBERON:0000955;7.48e-13;68!UBERON:0002240;9.10e-13;3!UBERON:0005174;9.10e-13;3!UBERON:0001137;9.10e-13;3!UBERON:0002021;1.00e-12;5!UBERON:0002619;1.25e-12;22!UBERON:0000988;5.70e-12;3!UBERON:0002420;1.60e-11;9!UBERON:0007245;1.60e-11;9!UBERON:0010009;1.60e-11;9!UBERON:0010011;1.60e-11;9!UBERON:0000454;1.60e-11;9!UBERON:0001950;5.12e-11;20!UBERON:0000956;5.57e-11;25!UBERON:0000203;5.57e-11;25!UBERON:0002298;1.02e-10;6!UBERON:0004732;1.38e-10;13!UBERON:0009663;1.06e-09;7!UBERON:0001894;1.62e-09;7!UBERON:0001875;3.64e-09;2!UBERON:0006514;3.64e-09;2!UBERON:0001897;3.87e-09;2!UBERON:0010225;3.87e-09;2!UBERON:0005162;5.25e-09;2!UBERON:0000122;5.25e-09;2!UBERON:0002360;1.53e-08;2!UBERON:0002148;1.53e-08;2!UBERON:0006331;1.53e-08;2!UBERON:0009662;1.53e-08;2!UBERON:0000094;1.53e-08;2!UBERON:0010743;1.53e-08;2!UBERON:0004733;4.35e-08;12!UBERON:0002028;4.35e-08;12!UBERON:0002680;4.75e-07;9!UBERON:0001895;4.75e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.25e-48,114;UBERON:0001049,2.36e-41,56;UBERON:0005068,2.36e-41,56;UBERON:0006241,2.36e-41,56;UBERON:0007135,2.36e-41,56;UBERON:0001017,2.91e-36,81;UBERON:0001016,1.53e-34,89;UBERON:0003075,7.58e-34,82;UBERON:0007284,7.58e-34,82;UBERON:0000073,9.50e-34,53;UBERON:0002616,9.50e-34,53;UBERON:0002346,5.82e-32,86;UBERON:0000955,8.70e-30,68;UBERON:0006238,8.70e-30,68;UBERON:0002780,7.80e-27,41;UBERON:0001890,7.80e-27,41;UBERON:0003080,7.80e-27,41;UBERON:0006240,7.80e-27,41;UBERON:0010371,2.93e-25,104;UBERON:0010314,2.05e-23,132;UBERON:0003528,2.54e-22,34;UBERON:0002020,2.54e-22,34;UBERON:0003056,2.97e-21,61;UBERON:0001893,1.99e-19,34;UBERON:0004121,1.19e-18,171;UBERON:0000924,1.19e-18,171;UBERON:0006601,1.19e-18,171;UBERON:0002791,7.46e-18,32;UBERON:0003076,8.65e-16,15;UBERON:0003057,8.65e-16,15;UBERON:0000125,1.11e-15,9;UBERON:0002308,1.11e-15,9;UBERON:0001869,4.52e-15,32;UBERON:0000025,7.52e-15,192;UBERON:0002240,9.70e-13,3;UBERON:0005174,9.70e-13,3;UBERON:0001137,9.70e-13,3;UBERON:0002619,1.55e-12,22;UBERON:0002021,1.81e-12,5;UBERON:0011216,1.90e-12,223;UBERON:0000988,5.94e-12,3;UBERON:0002420,1.52e-11,9;UBERON:0007245,1.52e-11,9;UBERON:0010009,1.52e-11,9;UBERON:0010011,1.52e-11,9;UBERON:0000454,1.52e-11,9;UBERON:0004111,2.78e-11,240;UBERON:0001950,6.66e-11,20;UBERON:0000956,6.70e-11,25;UBERON:0000203,6.70e-11,25;UBERON:0002298,1.07e-10,6;UBERON:0004732,1.45e-10,13;UBERON:0009663,1.02e-09,7;UBERON:0001894,1.59e-09,7;UBERON:0006222,1.59e-09,7;UBERON:0001875,3.23e-09,2;UBERON:0006514,3.23e-09,2;UBERON:0005162,3.65e-09,2;UBERON:0000122,3.65e-09,2;UBERON:0001897,4.30e-09,2;UBERON:0010225,4.30e-09,2;UBERON:0002148,1.31e-08,2;UBERON:0006331,1.31e-08,2;UBERON:0009662,1.31e-08,2;UBERON:0002360,1.36e-08,2;UBERON:0000094,1.36e-08,2;UBERON:0010743,1.36e-08,2;UBERON:0004733,4.53e-08,12;UBERON:0002028,4.53e-08,12;UBERON:0007277,4.53e-08,12;UBERON:0000483,5.62e-08,306;UBERON:0000119,7.97e-08,309;UBERON:0002680,4.91e-07,9;UBERON:0001895,4.91e-07,9;UBERON:0010092,4.91e-07,9 | |||
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|short_description=p3@LCNL1 | |short_description=p3@LCNL1 | ||
}} | }} |
Latest revision as of 14:47, 16 September 2015
Short description: | p3@LCNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LCNL1_5end |
Coexpression cluster: | C485_Pericytes_retina_cerebral_Dendritic_testis_corpus_spinal |
Association with transcript: | -302bp_to_ENST00000482657_5end |
EntrezGene: | LCNL1 |
HGNC: | 34436 |
UniProt: | F2Z3E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 5.41e-10 | 4 |
central nervous system pericyte | 9.70e-10 | 2 |