FFCP PHASE1:Hg19::chr2:134326009..134326053,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29847 | |||
|TSSclassifier=strong | |||
|UniProt=O14513 | |||
|association_with_transcript=0bp_to_ENST00000409213,ENST00000409261,NM_207363,NM_207481,uc002ttp.2,uc002ttq.2,uc002ttt.1_5end | |||
|cluster_id=chr2:134326009..134326053,- | |||
|description=CAGE_peak_1_at_NCKAP5_5end | |||
|id=chr2:134326009..134326053,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.21e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.55e-32!115;UBERON:0004111!8.99e-25!241;UBERON:0001049!3.27e-24!57;UBERON:0005068!3.27e-24!57;UBERON:0006241!3.27e-24!57;UBERON:0007135!3.27e-24!57;UBERON:0000073!1.55e-23!94;UBERON:0001016!1.55e-23!94;UBERON:0005743!4.23e-22!86;UBERON:0000025!4.23e-22!194;UBERON:0001017!8.28e-22!82;UBERON:0000477!1.03e-21!286;UBERON:0000955!1.19e-21!69;UBERON:0006238!1.19e-21!69;UBERON:0002616!2.94e-21!59;UBERON:0000481!1.31e-20!347;UBERON:0002346!2.00e-20!90;UBERON:0000468!1.94e-19!659;UBERON:0000475!2.89e-19!365;UBERON:0003080!3.34e-19!42;UBERON:0003075!3.91e-19!86;UBERON:0007284!3.91e-19!86;UBERON:0002780!3.95e-19!41;UBERON:0001890!3.95e-19!41;UBERON:0006240!3.95e-19!41;UBERON:0000483!1.76e-17!309;UBERON:0000153!3.28e-17!129;UBERON:0007811!3.28e-17!129;UBERON:0002020!5.01e-17!34;UBERON:0003528!5.01e-17!34;UBERON:0000119!5.25e-17!312;UBERON:0001893!6.33e-17!34;UBERON:0000033!1.14e-16!123;UBERON:0002791!1.56e-16!33;UBERON:0001869!9.36e-16!32;UBERON:0003056!8.98e-15!61;UBERON:0000467!4.18e-14!625;UBERON:0000480!6.38e-14!626;UBERON:0000922!1.03e-12!612;UBERON:0002619!1.11e-12!22;UBERON:0000924!1.85e-12!173;UBERON:0006601!1.85e-12!173;UBERON:0000956!5.84e-12!25;UBERON:0000203!5.84e-12!25;UBERON:0002050!1.03e-11!605;UBERON:0005423!1.03e-11!605;UBERON:0004121!1.75e-11!169;UBERON:0001950!2.15e-11!20;UBERON:0000923!2.44e-11!604;UBERON:0005291!2.44e-11!604;UBERON:0006598!2.44e-11!604;UBERON:0002532!2.44e-11!604;UBERON:0000062!1.98e-09!511;UBERON:0003103!2.12e-07!69;UBERON:0000064!4.02e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.10e-19;34!UBERON:0002020;4.10e-19;34!UBERON:0002791;7.34e-19;32!UBERON:0001893;7.72e-19;34!UBERON:0001869;1.08e-18;32!UBERON:0002780;2.21e-18;41!UBERON:0001890;2.21e-18;41!UBERON:0002619;5.97e-17;22!UBERON:0000073;2.12e-15;53!UBERON:0002616;2.12e-15;53!UBERON:0000956;2.73e-15;25!UBERON:0000203;2.73e-15;25!UBERON:0001950;3.75e-15;20!UBERON:0001016;8.31e-13;83!UBERON:0001017;1.26e-12;75!UBERON:0000955;1.56e-11;68!UBERON:0007023;1.44e-09;114!UBERON:0000125;1.25e-08;9!UBERON:0002308;1.25e-08;9!UBERON:0002420;2.85e-08;9!UBERON:0007245;2.85e-08;9!UBERON:0010009;2.85e-08;9!UBERON:0010011;2.85e-08;9!UBERON:0000454;2.85e-08;9!UBERON:0000922;3.03e-08;49!UBERON:0009663;4.49e-07;7!UBERON:0011216;8.07e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.77e-35,114;UBERON:0001049,5.65e-30,56;UBERON:0005068,5.65e-30,56;UBERON:0006241,5.65e-30,56;UBERON:0007135,5.65e-30,56;UBERON:0000073,8.22e-28,53;UBERON:0002616,8.22e-28,53;UBERON:0001016,1.14e-27,89;UBERON:0002346,4.06e-26,86;UBERON:0001017,1.29e-25,81;UBERON:0000955,1.96e-25,68;UBERON:0006238,1.96e-25,68;UBERON:0002780,6.90e-25,41;UBERON:0001890,6.90e-25,41;UBERON:0003080,6.90e-25,41;UBERON:0006240,6.90e-25,41;UBERON:0003075,8.12e-25,82;UBERON:0007284,8.12e-25,82;UBERON:0003528,1.83e-22,34;UBERON:0002020,1.83e-22,34;UBERON:0001893,2.53e-22,34;UBERON:0000025,5.06e-21,192;UBERON:0002791,6.39e-21,32;UBERON:0001869,1.09e-20,32;UBERON:0010314,1.48e-20,132;UBERON:0004111,2.08e-20,240;UBERON:0003056,2.14e-19,61;UBERON:0011216,3.29e-19,223;UBERON:0002619,3.54e-17,22;UBERON:0010371,3.79e-17,104;UBERON:0004121,2.43e-16,171;UBERON:0000924,2.43e-16,171;UBERON:0006601,2.43e-16,171;UBERON:0000956,2.20e-15,25;UBERON:0000203,2.20e-15,25;UBERON:0001950,2.27e-15,20;UBERON:0000483,1.49e-12,306;UBERON:0000119,3.99e-12,309;UBERON:0000922,6.56e-12,592;UBERON:0005423,1.48e-11,581;UBERON:0002050,8.80e-11,564;UBERON:0000923,6.61e-10,560;UBERON:0010316,6.61e-10,560;UBERON:0005291,6.61e-10,560;UBERON:0006598,6.61e-10,560;UBERON:0010317,6.61e-10,560;UBERON:0002532,6.61e-10,560;UBERON:0000125,1.05e-08,9;UBERON:0002308,1.05e-08,9;UBERON:0002420,1.67e-08,9;UBERON:0007245,1.67e-08,9;UBERON:0010009,1.67e-08,9;UBERON:0010011,1.67e-08,9;UBERON:0000454,1.67e-08,9;UBERON:0009663,3.51e-07,7 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,5.3786011716142,2.41077811209591,1.46062018077475,0.975865597581014,0.123121058076788,0.204000691244253,0.313454721478088,0.85870796139317,0,1.00434111675842,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0,0,0,2.17430079477356,1.55210578223795,2.28370442802128,6.61444331263449,0,0,0,0,0,0,0,0,1.98762407366705,1.72046919021225,0,0,0,0.275118041940067,0,0.258416759169329,1.77883131343355,1.67360306382335,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,10.933382937297,0.759783069987479,22.5095607382472,8.60509862246441,1.77334191099179,1.68203280042692,1.06748995729705,0.49333509683432,0.622422070799533,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.600952235626387,0.113432183160021,0.717558542755448,0.85422955527427,0.423863802319124,2.10063767259082,0.721367704669072,2.83404594050192,1.30281799432113,0.337552664482532,0,0.504867548488229,0.552299391853796,0.161646056818812,0.355009592516614,0.705264687593482,0,0.57978255948989,1.09098448236334,0,0,0,0.580969714347592,2.17688215532278,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,8.84544495009863,4.72631925345123,0,1.72183813960359,0,0.219500570817251,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,1.97081688457631,0.70445216541493,0.577465791044295,0.925971025153221,0.570762456703795,1.58040879591855,1.71697232418975,0,0,0,1.87467667973554,2.85569617938061,0.992425680696705,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,6.59285750364667,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,1.27047312111232,2.60279707715243,0.773288812777695,0.167516265334349,0,0,0,0,0.981531933753119,0.500170521059677,0.813795071099207,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0.60818530127658,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.512556597022804,0.511707249066704,0.804269605718038,0,0.462629081407967,0.177561725313127,0.492762936082855,4.15403543346897,0.464841513839837,0.241718899183244,0.601519410909855,0,0,0.910455840033585,1.96686622439136,0,0.308061348417659,0.784349769176855,1.46139224653261,0.844413031143006,0,0.680374821106063,0.863663664408557,1.54227252690289,0.812839312631559,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0,0.328014645699706,1.62689197332152,4.6368455241475,0,0,0,0,4.82051789532479,0.773365746336976,0,0,0.551346289938122,0,0.145016693914229,0.340906509664404,0.623224249527161,0,0.192190067365106,2.4246415373971,0.30347334256665,1.39453664789186,14.1665556073788,0.6970372701606,3.69640296211307,0,0,1.29726953372744,0.429374660225974,0,1.58189712359363,0.953150969619124,0,0.855877976067841,2.86382923133343,0,0.359744915166629,0.274537029736055,0.589062011728432,0.808729926293264,0,1.26377536871694,0,5.36169677188826,1.05650146756755,1.77449884830381,4.24216295861138,2.26016233240486,1.10273068709225,1.32687795048244,0.876901770507525,0,0.655894752046633,3.65238678532867,3.40805847909725,2.25356482025793,0.143411352204052,0.785992328104969,5.7067368237,0,0.422215270595328,0,0,0,0.192444225451024,0,0,4.5189024372854,0,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24873719888493,0,0,0,0,0,0,1.9882952955326,7.59614848616769,0.333926115068718,0,27.8685538728951,2.59022384726391,1.93398740871803,4.78672220923124,2.96579179256249,0,1.24415835064723,0.269605053441981,0,0,0.690503839458535,0,0,3.87733098438087,1.94813006139888,5.98841394003583,0.520855522170466,0,0.724999575434793,0.796554137998498,0,0,0,0.583209226766509,0.347249989866585,7.08593108651071,4.70326110639091,1.52581736317083,5.86070077635491,2.36438095162838,2.63262476584767,0,0.278847488557207,3.00106008164809,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0.995261931078505,6.1035719507304,7.94339188413713,0,0,0,5.93129970229958,8.02577647298789,2.34264445725339,0,0.19566461893209,0,1.18375320854817,10.8891644443797,3.0607276163049,1.13735843331278,0,0.103688191397247,0,0,0,0,0,1.66409607615766,0,0,0,7.16379339792324,0,0,0,0,2.42472541221049,0.0882561266915003,7.90932592731864,0,0,2.72236422610278,0,0,2.13452994739353,0,3.31407959454444,0,0.343189995723929,0,5.83986917157533,0,0,0,0.509991088181609,0,10.8075651967762,5.61312053457172,0,17.1906176567983,0,1.95497680890578,5.72901060029209,0,2.99518500748487,4.72148652950228,0.89268582976749,8.93540184073459,22.338592779629,0,0,0,0,0.0984274815147488,0,7.95229689809303,6.1291532750209,0,0,0,0,0,1.94398581305679,0,14.5002501430525,7.81573363211472,0.316801009558219,0.179287339332845,0,5.71756261098694,1.32418394073086,0,2.17199840701485,0,4.24563568142232,0,0,1.70388021785422,0,2.78449243988357,9.27548222385549,5.30060121082357,4.49590845925146,0.171086837884329,0,1.70859860108311,17.9212907813619,2.89967338743037,2.48083010905975,0,0,0,0.544017803369474,2.0055191521816,0,0,0.157054096250234,4.43034089983493,4.02686674176478,4.75725536684699,1.14681839138014,3.66065870071613,3.91207338530716,4.42715631795939,2.24964734331792,0,0,1.17632909849086,0,0,1.04478362020812,0.233713309847224,2.77402930751307,0.378806010550178,1.50940741051545,2.66943366478961,3.20376095755693,4.68815863666041,3.88593001456951,5.47064054961645,6.6904642208755,0.899606224327209,4.192099835659,7.05000553329454,5.3168342911599,3.65221543268214,0.601030435988874,0,4.47557806525128,9.81982759693821,0.966695013382396,15.3131140759903,3.58286299828754,0,1.03018711554838,0,3.78554694685953,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,6.77466337143481,0,0,0,0,0.983091635014877,0.211312123358627,0,0,0,0,0.368211900503681,0,0.622077260032973,0.127894371303652,0,10.3795521624892,0,1.18812770967818,0.212574920101683,92.2082086086976,1.11728983594649,6.99609571437521,187.927538337987,0,0,1.2249819094128,3.91798273088403,8.5017945795351,5.9064527851146,2.66651273512982,3.27693205088234,1.1756732918917,4.35984243205998,5.71077681036618,0,0,0,0,0,0,0,0.225630985047772,0,1.56302802246618,0,3.60298218522213,0.887136517302272,2.63396580011739,3.90539049306924,5.78723030203315,2.60004821795018,6.56369770821863,0.548257766857182,3.96968942711435,3.51742488719241,0.127762427639595,141.960986507746,225.646377608831,0,0.455324382702595,0.266107110487916,0,0,3.60239584777208,2.36781984826257,0,1.55723962648897,0.863424021355654,3.77077415798405,2.24217730651031,16.4368569691709,9.0689588311821,19.5878192033691,8.00537294778551,0.158013611732727,0,0.695433089210318,0.801711364730253,0,1.53646629384555,0.691259661814092,9.46500189404611,2.12997601315018,2.47118873801557,1.69354820076372,0,0.31020638566432,0,0,0,2.92603019957447,0.647428837187895,0.513314034281235,18.5570309014112,47.1139663267365,0,0.596852325484105,0,0.11294608203896,0,23.3992407528344,18.6761462621226,12.0207758277177,0,1.96118657403124,0,5.30032861210352,4.1586496045792,3.3812458206672,0.849635573439084,0.187967835959707,1.99819452718089,0,0.178553938605658,0,0,2.92134555298607,5.96348068425903,4.87354582714934,0.788857810965923,1.8357702351547,3.9271562130634,12.1676173318542,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0,0,0,0.0918948995348449,0,0.909344378618873,3.21556956187414,8.29169439458779,7.03344371860887,2.98527574661373,7.61806180683969,0.516711278688049,3.28995985768047,0,0.25458863311266,1.61693751166575,5.00748520163011,5.81796611844978,1.88585748440845,1.2192774916755,5.32256570473621,0.0814032686109745,0,3.8614456457388,8.80286980644551,7.03922827210363,4.15620910221746,6.91723503136755,0.665756774185513,2.61655931668334,0 | |||
|short_description=p1@NCKAP5 | |||
}} |
Latest revision as of 00:52, 17 September 2015
Short description: | p1@NCKAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCKAP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409213, ENST00000409261, NM_207363, NM_207481, uc002ttp.2, uc002ttq.2, uc002ttt.1_5end |
EntrezGene: | NCKAP5 |
HGNC: | 29847 |
UniProt: | O14513 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data