FFCP PHASE1:Hg19::chr2:45169024..45169033,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:45169024..45169033,+ to FFCP PHASE1:Hg19::chr2:45169024..45169033,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6496 | |EntrezGene=6496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10889 | |HGNC=10889 | ||
|TSSclassifier=strong | |||
|UniProt=O95343 | |UniProt=O95343 | ||
|association_with_transcript=-3bp_to_NM_005413,uc002run.1_5end | |||
|cluster_id=chr2:45169024..45169033,+ | |||
|coexpression_cluster_id=C1905 | |||
|description=CAGE_peak_12_at_SIX3_5end | |||
|id=chr2:45169024..45169033,+ | |||
|ontology_enrichment_celltype=CL:0002586!2.08e-09!3;CL:0000064!2.40e-09!3;CL:0005012!2.40e-09!3;CL:0000067!2.40e-09!3;CL:0002304!2.40e-09!3;CL:0000306!2.21e-07!4;CL:0002222!2.21e-07!4;CL:0002224!2.21e-07!4;CL:0000149!3.83e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.81e-09;4!CL:0002222;1.81e-09;4!CL:0002224;1.81e-09;4!CL:0000333;9.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.15e-09,4;CL:0002222,2.15e-09,4;CL:0002224,2.15e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.36e-19;2!UBERON:0003056;1.45e-12;3 | |||
|ontology_enrichment_disease=DOID:171!9.86e-10!10;DOID:169!5.02e-08!6;DOID:5409!9.92e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005383;1.91e-27;3!UBERON:0005382;1.91e-27;3!UBERON:0000369;9.43e-21;4!UBERON:0002435;9.43e-21;4!UBERON:0000204;9.43e-21;4!UBERON:0009663;1.93e-20;7!UBERON:0001873;5.36e-19;2!UBERON:0000007;6.42e-19;2!UBERON:0000966;3.92e-16;5!UBERON:0005388;3.92e-16;5!UBERON:0001802;3.92e-16;5!UBERON:0002420;5.89e-16;9!UBERON:0000125;5.89e-16;9!UBERON:0007245;5.89e-16;9!UBERON:0002308;5.89e-16;9!UBERON:0010009;5.89e-16;9!UBERON:0010011;5.89e-16;9!UBERON:0000454;5.89e-16;9!UBERON:0000970;4.28e-15;20!UBERON:0002104;2.34e-14;21!UBERON:0000020;4.51e-13;23!UBERON:0001032;1.65e-12;24!UBERON:0004456;1.65e-12;24!UBERON:0000019;3.49e-11;19!UBERON:0000047;3.49e-11;19!UBERON:0004088;3.49e-11;19!UBERON:0010230;3.49e-11;19!UBERON:0001874;3.10e-10;1!UBERON:0001456;4.18e-10;21!UBERON:0003296;6.34e-10;4!UBERON:0010133;6.34e-10;4!UBERON:0010077;1.81e-09;4!UBERON:0005389;1.81e-09;4!UBERON:0000484;1.81e-09;4!UBERON:0000965;1.81e-09;4!UBERON:0001803;1.81e-09;4!UBERON:0001264;1.70e-08;10!UBERON:0002075;5.70e-08;18!UBERON:0002780;8.67e-08;41!UBERON:0001890;8.67e-08;41!UBERON:0000013;9.54e-08;5!UBERON:0002410;9.54e-08;5!UBERON:0007625;1.59e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.34e-27,3;UBERON:0005382,1.34e-27,3;UBERON:0000369,7.24e-21,4;UBERON:0002435,7.24e-21,4;UBERON:0000204,7.24e-21,4;UBERON:0010082,7.24e-21,4;UBERON:0009663,1.20e-20,7;UBERON:0001873,4.91e-19,2;UBERON:0010122,4.91e-19,2;UBERON:0000007,6.43e-19,2;UBERON:0003056,2.95e-18,61;UBERON:0002420,4.09e-16,9;UBERON:0000125,4.09e-16,9;UBERON:0007245,4.09e-16,9;UBERON:0002308,4.09e-16,9;UBERON:0010009,4.09e-16,9;UBERON:0010011,4.09e-16,9;UBERON:0000454,4.09e-16,9;UBERON:0000970,2.40e-14,21;UBERON:0002104,2.40e-14,21;UBERON:0000966,1.18e-13,6;UBERON:0005388,1.18e-13,6;UBERON:0001802,1.18e-13,6;UBERON:0003075,3.89e-13,82;UBERON:0007284,3.89e-13,82;UBERON:0000020,1.68e-12,24;UBERON:0001032,1.68e-12,24;UBERON:0004456,1.68e-12,24;UBERON:0002346,1.93e-12,86;UBERON:0000019,1.23e-10,20;UBERON:0000047,1.23e-10,20;UBERON:0010312,1.23e-10,20;UBERON:0004088,1.23e-10,20;UBERON:0010230,1.23e-10,20;UBERON:0003072,1.23e-10,20;UBERON:0004128,1.23e-10,20;UBERON:0003071,1.23e-10,20;UBERON:0001874,2.37e-10,1;UBERON:0010371,5.76e-10,104;UBERON:0003296,6.34e-10,4;UBERON:0010133,6.34e-10,4;UBERON:0001456,1.18e-09,22;UBERON:0002780,1.41e-09,41;UBERON:0001890,1.41e-09,41;UBERON:0003080,1.41e-09,41;UBERON:0006240,1.41e-09,41;UBERON:0010077,2.15e-09,4;UBERON:0005389,2.15e-09,4;UBERON:0000484,2.15e-09,4;UBERON:0002546,2.15e-09,4;UBERON:0000965,2.15e-09,4;UBERON:0001803,2.15e-09,4;UBERON:0003073,2.15e-09,4;UBERON:0005426,2.15e-09,4;UBERON:0010314,6.89e-09,132;UBERON:0001264,1.60e-08,10;UBERON:0002075,5.49e-08,18;UBERON:0001016,5.61e-08,89;UBERON:0000013,9.88e-08,5;UBERON:0002410,9.88e-08,5;UBERON:0007625,1.57e-07,11;UBERON:0004121,2.19e-07,171;UBERON:0000924,2.19e-07,171;UBERON:0006601,2.19e-07,171;UBERON:0000073,2.82e-07,53;UBERON:0002616,2.82e-07,53;UBERON:0000955,4.80e-07,68;UBERON:0006238,4.80e-07,68;UBERON:0001049,7.49e-07,56;UBERON:0005068,7.49e-07,56;UBERON:0006241,7.49e-07,56;UBERON:0007135,7.49e-07,56;UBERON:0005085,8.40e-07,31 | |||
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| ||
|short_description=p12@SIX3 | |||
}} | }} |
Latest revision as of 09:38, 17 September 2015
Short description: | p12@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SIX3_5end |
Coexpression cluster: | C1905_caudate_putamen_embryonic_pituitary_globus_cord_rhabdomyosarcoma |
Association with transcript: | -3bp_to_NM_005413, uc002run.1_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | O95343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.15e-09 | 4 |
vertebrate lens cell | 2.15e-09 | 4 |
lens epithelial cell | 2.15e-09 | 4 |