FFCP PHASE1:Hg19::chr2:45169684..45169715,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:45169684..45169715,+
|short_description=p9@SIX3
|description=CAGE_peak_9_at_SIX3_5end
|association_with_transcript=442bp_to_AB464210,BC153026_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6496 | |EntrezGene=6496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10889 | |HGNC=10889 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=442bp_to_AB464210,BC153026_5end | |||
|cluster_id=chr2:45169684..45169715,+ | |||
|coexpression_cluster_id=C1905 | |||
|description=CAGE_peak_9_at_SIX3_5end | |||
|id=chr2:45169684..45169715,+ | |||
|ontology_enrichment_celltype=CL:0002586!8.63e-07!3;CL:0000064!9.52e-07!3;CL:0005012!9.52e-07!3;CL:0000067!9.52e-07!3;CL:0002304!9.52e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000306;9.38e-13;4!CL:0002222;9.38e-13;4!CL:0002224;9.38e-13;4!CL:0002586;3.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,9.78e-13,4;CL:0002222,9.78e-13,4;CL:0002224,9.78e-13,4;CL:0002586,2.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.39e-13;2!UBERON:0006222;4.92e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.46e-07;1!DOID:0060061;3.46e-07;1!DOID:8691;3.46e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.78e-07,1;DOID:0060061,3.78e-07,1;DOID:8691,3.78e-07,1;DOID:630,7.15e-07,1;DOID:0050177,7.15e-07,1;DOID:0050427,7.15e-07,1 | |||
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|short_description=p9@SIX3 | |||
}} | }} |
Latest revision as of 09:43, 17 September 2015
Short description: | p9@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SIX3_5end |
Coexpression cluster: | C1905_caudate_putamen_embryonic_pituitary_globus_cord_rhabdomyosarcoma |
Association with transcript: | 442bp_to_AB464210, BC153026_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 9.78e-13 | 4 |
vertebrate lens cell | 9.78e-13 | 4 |
lens epithelial cell | 9.78e-13 | 4 |
retinal pigment epithelial cell | 2.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.78e-07 | 1 |
cutaneous T cell lymphoma | 3.78e-07 | 1 |
mycosis fungoides | 3.78e-07 | 1 |
genetic disease | 7.15e-07 | 1 |
monogenic disease | 7.15e-07 | 1 |
xeroderma pigmentosum | 7.15e-07 | 1 |