FFCP PHASE1:Hg19::chr17:73874625..73874640,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19020 | |||
|TSSclassifier=strong | |||
|UniProt=Q96LD4 | |||
|association_with_transcript=15bp_to_ENST00000254816,NM_033452,uc002jpw.2_5end | |||
|cluster_id=chr17:73874625..73874640,- | |||
|coexpression_cluster_id=C3678 | |||
|description=CAGE_peak_3_at_TRIM47_5end | |||
|id=chr17:73874625..73874640,- | |||
|ontology_enrichment_celltype=CL:0002078!3.61e-15!44;CL:0000115!3.71e-15!35;CL:0000213!4.31e-15!57;CL:0000215!4.31e-15!57;CL:0002139!1.39e-12!24;CL:0000071!1.26e-09!18;CL:0002546!1.26e-09!18;CL:0000220!2.69e-08!246;CL:0000066!4.81e-08!254;CL:0002321!6.92e-08!248;CL:0000222!2.71e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.68e-19;36!CL:0002139;5.26e-17;24!CL:0002078;2.66e-14;45!CL:0000071;5.92e-13;18!CL:0000213;5.02e-11;58!CL:0000215;5.02e-11;58!CL:1000413;6.30e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.38e-22,36;CL:0002078,8.44e-21,45;CL:0000213,2.70e-20,58;CL:0000215,2.70e-20,58;CL:0002139,3.07e-17,24;CL:0000071,4.94e-13,18;CL:0002546,4.94e-13,18;CL:1000413,5.96e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;5.92e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!3.72e-26!241;UBERON:0000477!1.15e-24!286;UBERON:0000025!5.07e-21!194;UBERON:0007023!1.05e-19!115;UBERON:0005743!2.32e-18!86;UBERON:0000483!3.26e-18!309;UBERON:0000480!5.46e-18!626;UBERON:0000467!6.42e-18!625;UBERON:0000119!1.67e-17!312;UBERON:0001017!5.19e-17!82;UBERON:0001049!5.84e-17!57;UBERON:0005068!5.84e-17!57;UBERON:0006241!5.84e-17!57;UBERON:0007135!5.84e-17!57;UBERON:0002050!2.62e-16!605;UBERON:0005423!2.62e-16!605;UBERON:0000468!3.55e-16!659;UBERON:0000923!3.90e-16!604;UBERON:0005291!3.90e-16!604;UBERON:0006598!3.90e-16!604;UBERON:0002532!3.90e-16!604;UBERON:0000922!1.18e-15!612;UBERON:0000073!2.22e-15!94;UBERON:0001016!2.22e-15!94;UBERON:0000481!2.23e-15!347;UBERON:0003075!8.23e-15!86;UBERON:0007284!8.23e-15!86;UBERON:0000955!9.01e-14!69;UBERON:0006238!9.01e-14!69;UBERON:0003080!1.63e-13!42;UBERON:0002616!4.80e-13!59;UBERON:0002780!5.21e-13!41;UBERON:0001890!5.21e-13!41;UBERON:0006240!5.21e-13!41;UBERON:0002346!8.49e-13!90;UBERON:0002020!6.97e-12!34;UBERON:0003528!6.97e-12!34;UBERON:0001893!1.58e-11!34;UBERON:0002791!1.91e-11!33;UBERON:0000033!3.44e-11!123;UBERON:0000153!7.74e-11!129;UBERON:0007811!7.74e-11!129;UBERON:0004121!1.16e-10!169;UBERON:0001869!1.50e-10!32;UBERON:0000062!3.41e-10!511;UBERON:0000064!6.66e-10!219;UBERON:0003056!1.03e-09!61;UBERON:0001986!1.26e-09!18;UBERON:0004638!1.26e-09!18;UBERON:0004852!1.26e-09!18;UBERON:0000924!1.52e-09!173;UBERON:0006601!1.52e-09!173;UBERON:0006914!6.64e-09!25;UBERON:0000475!1.50e-08!365;UBERON:0000487!1.84e-08!22;UBERON:0000956!8.54e-08!25;UBERON:0000203!8.54e-08!25;UBERON:0003914!9.33e-08!118;UBERON:0002619!3.36e-07!22;UBERON:0003103!4.45e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.92e-13;18!UBERON:0001986;5.92e-13;18!UBERON:0004852;5.92e-13;18!UBERON:0006914;1.44e-11;25!UBERON:0000487;1.55e-10;22!UBERON:0003528;2.25e-10;34!UBERON:0002020;2.25e-10;34!UBERON:0002791;4.38e-10;32!UBERON:0001893;6.51e-10;34!UBERON:0002780;2.54e-09;41!UBERON:0001890;2.54e-09;41!UBERON:0001869;3.61e-09;32!UBERON:0000073;9.76e-09;53!UBERON:0002616;9.76e-09;53!UBERON:0003915;6.30e-08;9!UBERON:0004700;6.30e-08;9!UBERON:0001917;6.30e-08;9!UBERON:0000125;7.76e-08;9!UBERON:0002308;7.76e-08;9!UBERON:0001017;6.82e-07;75!UBERON:0000956;7.44e-07;25!UBERON:0000203;7.44e-07;25!UBERON:0000955;7.94e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.26e-18,81;UBERON:0007023,5.94e-18,114;UBERON:0004111,6.24e-18,240;UBERON:0000025,2.74e-17,192;UBERON:0001049,1.26e-16,56;UBERON:0005068,1.26e-16,56;UBERON:0006241,1.26e-16,56;UBERON:0007135,1.26e-16,56;UBERON:0001016,3.47e-15,89;UBERON:0003075,1.26e-14,82;UBERON:0007284,1.26e-14,82;UBERON:0000073,2.05e-14,53;UBERON:0002616,2.05e-14,53;UBERON:0000955,1.99e-13,68;UBERON:0006238,1.99e-13,68;UBERON:0002346,3.58e-13,86;UBERON:0004638,4.94e-13,18;UBERON:0001986,4.94e-13,18;UBERON:0004852,4.94e-13,18;UBERON:0010314,9.31e-13,132;UBERON:0003528,1.40e-12,34;UBERON:0002020,1.40e-12,34;UBERON:0002780,3.96e-12,41;UBERON:0001890,3.96e-12,41;UBERON:0003080,3.96e-12,41;UBERON:0006240,3.96e-12,41;UBERON:0010371,1.13e-11,104;UBERON:0006914,1.44e-11,25;UBERON:0001893,2.16e-11,34;UBERON:0002791,2.35e-11,32;UBERON:0000483,6.45e-11,306;UBERON:0000487,1.53e-10,22;UBERON:0000119,1.69e-10,309;UBERON:0000922,2.62e-10,592;UBERON:0001869,3.95e-10,32;UBERON:0005423,8.43e-10,581;UBERON:0011216,1.43e-09,223;UBERON:0002050,1.80e-09,564;UBERON:0003056,2.41e-09,61;UBERON:0000923,2.72e-09,560;UBERON:0010316,2.72e-09,560;UBERON:0005291,2.72e-09,560;UBERON:0006598,2.72e-09,560;UBERON:0010317,2.72e-09,560;UBERON:0002532,2.72e-09,560;UBERON:0004121,7.18e-09,171;UBERON:0000924,7.18e-09,171;UBERON:0006601,7.18e-09,171;UBERON:0003915,5.96e-08,9;UBERON:0004700,5.96e-08,9;UBERON:0001917,5.96e-08,9;UBERON:0000125,1.11e-07,9;UBERON:0002308,1.11e-07,9;UBERON:0000956,3.06e-07,25;UBERON:0000203,3.06e-07,25;UBERON:0002619,7.09e-07,22 | |||
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| |||
|short_description=p3@TRIM47 | |||
}} |
Latest revision as of 13:10, 17 September 2015
Short description: | p3@TRIM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM47_5end |
Coexpression cluster: | C3678_Mast_Mesenchymal_Renal_breast_Synoviocyte_myeloma_CD14 |
Association with transcript: | 15bp_to_ENST00000254816, NM_033452, uc002jpw.2_5end |
EntrezGene: | TRIM47 |
HGNC: | 19020 |
UniProt: | Q96LD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.38e-22 | 36 |
meso-epithelial cell | 8.44e-21 | 45 |
lining cell | 2.70e-20 | 58 |
barrier cell | 2.70e-20 | 58 |
endothelial cell of vascular tree | 3.07e-17 | 24 |
blood vessel endothelial cell | 4.94e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.94e-13 | 18 |
endothelial cell of artery | 5.96e-08 | 9 |