FFCP PHASE1:Hg19::chr21:40721290..40721326,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3150 | |EntrezGene=3150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4984 | |HGNC=4984 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000492280,uc002yxr.2_5end | |association_with_transcript=-20bp_to_ENST00000492280,uc002yxr.2_5end | ||
|cluster_id=chr21:40721290..40721326,- | |||
|description=CAGE_peak_9_at_HMGN1_5end | |description=CAGE_peak_9_at_HMGN1_5end | ||
|id=chr21:40721290..40721326,- | |id=chr21:40721290..40721326,- | ||
|ontology_enrichment_celltype=CL:0000839!3.41e-13!70;CL:0000766!1.20e-12!76;CL:0002194!4.43e-11!63;CL:0000576!4.43e-11!63;CL:0000040!4.43e-11!63;CL:0000559!4.43e-11!63;CL:0000557!4.98e-11!71;CL:0002057!5.28e-11!42;CL:0000860!7.81e-11!45;CL:0002009!1.73e-10!65;CL:0000763!8.91e-09!112;CL:0000049!8.91e-09!112 | |ontology_enrichment_celltype=CL:0000839!3.41e-13!70;CL:0000766!1.20e-12!76;CL:0002194!4.43e-11!63;CL:0000576!4.43e-11!63;CL:0000040!4.43e-11!63;CL:0000559!4.43e-11!63;CL:0000557!4.98e-11!71;CL:0002057!5.28e-11!42;CL:0000860!7.81e-11!45;CL:0002009!1.73e-10!65;CL:0000763!8.91e-09!112;CL:0000049!8.91e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000875;3.36e-07;3!CL:0002396;3.36e-07;3!CL:0000767;8.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.05e-11,72;CL:0002393,9.42e-11,9;CL:0002397,9.42e-11,9;CL:0000839,1.09e-10,66;CL:0000860,6.51e-09,42;CL:0002057,6.51e-09,42;CL:0000557,3.42e-08,67;CL:0000763,1.06e-07,108;CL:0000049,1.06e-07,108;CL:0000875,1.78e-07,3;CL:0002396,1.78e-07,3;CL:0000473,2.49e-07,48;CL:0000234,2.49e-07,48;CL:0000767,6.85e-07,3;CL:0002194,7.18e-07,59;CL:0000576,7.18e-07,59;CL:0000040,7.18e-07,59;CL:0000559,7.18e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.31e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.41e-23!57;UBERON:0005068!5.41e-23!57;UBERON:0006241!5.41e-23!57;UBERON:0007135!5.41e-23!57;UBERON:0001017!5.22e-21!82;UBERON:0005743!1.45e-20!86;UBERON:0007023!1.24e-19!115;UBERON:0002616!2.72e-19!59;UBERON:0000955!2.50e-18!69;UBERON:0006238!2.50e-18!69;UBERON:0003080!2.59e-18!42;UBERON:0002780!5.41e-18!41;UBERON:0001890!5.41e-18!41;UBERON:0006240!5.41e-18!41;UBERON:0000073!7.77e-18!94;UBERON:0001016!7.77e-18!94;UBERON:0002020!6.67e-15!34;UBERON:0003528!6.67e-15!34;UBERON:0001893!2.36e-14!34;UBERON:0002791!3.86e-14!33;UBERON:0003075!8.94e-14!86;UBERON:0007284!8.94e-14!86;UBERON:0001869!1.53e-13!32;UBERON:0002346!7.86e-12!90;UBERON:0002619!3.60e-11!22;UBERON:0003056!4.80e-11!61;UBERON:0001950!5.72e-10!20;UBERON:0000956!1.44e-09!25;UBERON:0000203!1.44e-09!25;UBERON:0000033!2.75e-08!123;UBERON:0000153!1.23e-07!129;UBERON:0007811!1.23e-07!129;UBERON:0002371!1.52e-07!80;UBERON:0004121!2.01e-07!169;UBERON:0002308!3.41e-07!9;UBERON:0000125!3.41e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!5.41e-23!57;UBERON:0005068!5.41e-23!57;UBERON:0006241!5.41e-23!57;UBERON:0007135!5.41e-23!57;UBERON:0001017!5.22e-21!82;UBERON:0005743!1.45e-20!86;UBERON:0007023!1.24e-19!115;UBERON:0002616!2.72e-19!59;UBERON:0000955!2.50e-18!69;UBERON:0006238!2.50e-18!69;UBERON:0003080!2.59e-18!42;UBERON:0002780!5.41e-18!41;UBERON:0001890!5.41e-18!41;UBERON:0006240!5.41e-18!41;UBERON:0000073!7.77e-18!94;UBERON:0001016!7.77e-18!94;UBERON:0002020!6.67e-15!34;UBERON:0003528!6.67e-15!34;UBERON:0001893!2.36e-14!34;UBERON:0002791!3.86e-14!33;UBERON:0003075!8.94e-14!86;UBERON:0007284!8.94e-14!86;UBERON:0001869!1.53e-13!32;UBERON:0002346!7.86e-12!90;UBERON:0002619!3.60e-11!22;UBERON:0003056!4.80e-11!61;UBERON:0001950!5.72e-10!20;UBERON:0000956!1.44e-09!25;UBERON:0000203!1.44e-09!25;UBERON:0000033!2.75e-08!123;UBERON:0000153!1.23e-07!129;UBERON:0007811!1.23e-07!129;UBERON:0002371!1.52e-07!80;UBERON:0004121!2.01e-07!169;UBERON:0002308!3.41e-07!9;UBERON:0000125!3.41e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.35e-22;34!UBERON:0002020;6.35e-22;34!UBERON:0002780;2.11e-20;41!UBERON:0001890;2.11e-20;41!UBERON:0002791;3.66e-20;32!UBERON:0001869;4.03e-20;32!UBERON:0000073;1.48e-19;53!UBERON:0002616;1.48e-19;53!UBERON:0001893;3.76e-19;34!UBERON:0002619;8.86e-16;22!UBERON:0000125;8.91e-16;9!UBERON:0002308;8.91e-16;9!UBERON:0000956;1.58e-13;25!UBERON:0000203;1.58e-13;25!UBERON:0001950;1.04e-12;20!UBERON:0000955;1.71e-12;68!UBERON:0002420;2.76e-12;9!UBERON:0007245;2.76e-12;9!UBERON:0010009;2.76e-12;9!UBERON:0010011;2.76e-12;9!UBERON:0000454;2.76e-12;9!UBERON:0009663;6.34e-12;7!UBERON:0001017;3.53e-11;75!UBERON:0001016;3.16e-10;83!UBERON:0000369;3.96e-10;4!UBERON:0002435;3.96e-10;4!UBERON:0000204;3.96e-10;4!UBERON:0007023;5.00e-10;114!UBERON:0004732;7.29e-10;13!UBERON:0002680;1.57e-08;9!UBERON:0001895;1.57e-08;9!UBERON:0005383;1.94e-08;3!UBERON:0005382;1.94e-08;3!UBERON:0004733;2.01e-08;12!UBERON:0002028;2.01e-08;12!UBERON:0000349;1.94e-07;5!UBERON:0000988;2.77e-07;3!UBERON:0002021;3.04e-07;5 | |||
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|phase1_expression=0,0.214100523890983,0.563817616383885,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0,0.123766352960047,0,0,1.20538905604795,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0.458480434487708,0.0821005894499457,0.787107813136792,1.18009283054671,1.53531759238885,1.39334510984468,0.919421224478927,0,0,0.619737604642413,0,0,1.10799081706375,1.80490002723128,1.30206522429511,0.895661896959697,1.29557466407592,0.257575567634187,0.290796477559129,0.755751887377619,0.727752183563449,0.929716147622738,1.6446715520873,1.54853185447552,0.28769239232215,0,0.47296445977717,0.689491361473237,0,2.70852973188684,0.941211697713023,0.545812300115692,0.449446968890169,0,0.962787081228281,1.91801137739712,1.31940520074686,0.997318288108159,0,0.870627715885752,1.13477044938228,0.622822248995575,1.25624332628372,0.521482918420201,0.868755378820466,0,1.10483290796269,0.316462387440884,1.05627643155971,0.637812899895131,0.628975936525128,1.23561494261145,0.750884464207532,0.48217676009124,2.85012743741249,1.79025009479181,1.27864907635244,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.445641827540694,0,0.443067789167242,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0.339928028092699,0,0.68725489096526,0.253019692019503,0,0,0,0.301150238155546,0,0,0,0.821127996921047,0.403213486449465,1.06976078313403,0.724122019413995,0,0,0.12786256184353,0,0,0,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.175669571386252,2.68507104770311,0,0,1.62273696827342,0.696518949197069,0.930705723632056,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0.379891534993739,1.72131935057184,1.43418310374407,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.151357427644931,0.576175924479999,0.468642863667593,0,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0.505008341862199,0.375355559615893,1.10825646193673,0,0.30648779579902,0.150238058906597,0.226864366320042,0.358779271377724,0.427114777637135,0,0.300091096084402,0,1.8034837803194,0.18611685633159,0.675105328965065,0.292311015483596,1.00973509697646,0.184099797284599,0.161646056818812,0.355009592516614,0.201504196455281,0,0.193260853163297,0,0,0.731842236777572,0.265059536642971,0.348581828608555,0.310983165046111,1.00928340350251,0.36497735907583,0,0,0,0.928735856063958,1.44375896333917,0,0,0.482022059766964,0.110293972732394,0.435758888184812,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0.936017060556951,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0.616339038092582,1.24396869324463,1.58531948758658,1.38866676769018,0.380987365753014,0,0,0,0.514137463516618,0.300343057843917,0.285826432630578,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0.65147236858747,0,1.58390374586686,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.716243852959582,0.112085143993527,0.197030760201927,0.215627574859517,0.385029108839245,0,1.30139853857622,0.773288812777695,0.167516265334349,1.27587750330633,0.749007023947182,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0.347534457872331,0.587403472388222,0,0.206768026122887,0,0.640365346820666,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,0.482561763430822,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0.601519410909855,0.368323955743585,0.114814448164607,0.182091168006717,0.524497659837696,0,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0.509752546090077,0,0,2.41185864310528,2.87578996127391,0.256450125116389,0.328014645699706,0,0.618246069886334,0,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.255679882248303,0.178064071293475,0.826424576804891,0,0.638063562472921,0.708104465988849,0.464845549297286,1.5740617341532,0.6970372701606,0,0,0.869932992075073,0.55597265731176,0,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0.608731130888112,0,0.281695602532241,0.430234056612155,0.294747123039363,0,0,0,0.658589785919804,1.13841952129715,0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| ||
|short_description=p9@HMGN1 | |short_description=p9@HMGN1 | ||
}} | }} |
Latest revision as of 11:20, 18 September 2015
Short description: | p9@HMGN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HMGN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000492280, uc002yxr.2_5end |
EntrezGene: | HMGN1 |
HGNC: | 4984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.05e-11 | 72 |
intermediate monocyte | 9.42e-11 | 9 |
CD14-positive, CD16-positive monocyte | 9.42e-11 | 9 |
myeloid lineage restricted progenitor cell | 1.09e-10 | 66 |
classical monocyte | 6.51e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.51e-09 | 42 |
granulocyte monocyte progenitor cell | 3.42e-08 | 67 |
myeloid cell | 1.06e-07 | 108 |
common myeloid progenitor | 1.06e-07 | 108 |
non-classical monocyte | 1.78e-07 | 3 |
CD14-low, CD16-positive monocyte | 1.78e-07 | 3 |
defensive cell | 2.49e-07 | 48 |
phagocyte | 2.49e-07 | 48 |
basophil | 6.85e-07 | 3 |
monopoietic cell | 7.18e-07 | 59 |
monocyte | 7.18e-07 | 59 |
monoblast | 7.18e-07 | 59 |
promonocyte | 7.18e-07 | 59 |