FFCP PHASE1:Hg19::chr1:174769006..174769056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt=Q5R372 | |UniProt=Q5R372 | ||
|association_with_transcript=0bp_to_NM_001243765_5end | |association_with_transcript=0bp_to_NM_001243765_5end | ||
|cluster_id=chr1:174769006..174769056,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_5_at_RABGAP1L_5end | |description=CAGE_peak_5_at_RABGAP1L_5end | ||
|id=chr1:174769006..174769056,+ | |id=chr1:174769006..174769056,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.62e-08!140;CL:0000791!1.69e-07!18;CL:0000789!1.69e-07!18;CL:0002420!1.69e-07!18;CL:0002419!1.69e-07!18;CL:0000790!1.69e-07!18;CL:0000542!1.69e-07!53;CL:0000051!1.69e-07!53;CL:0000838!2.92e-07!52 | |ontology_enrichment_celltype=CL:0000738!1.62e-08!140;CL:0000791!1.69e-07!18;CL:0000789!1.69e-07!18;CL:0002420!1.69e-07!18;CL:0002419!1.69e-07!18;CL:0000790!1.69e-07!18;CL:0000542!1.69e-07!53;CL:0000051!1.69e-07!53;CL:0000838!2.92e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.83e-10;18!CL:0000789;1.83e-10;18!CL:0002419;1.83e-10;18!CL:0000625;2.35e-07;11!CL:0000094;8.15e-07;8!CL:0000084;8.77e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.68e-10,18;CL:0000789,1.68e-10,18;CL:0002420,1.68e-10,18;CL:0002419,1.68e-10,18;CL:0000790,1.68e-10,18;CL:0000738,2.74e-09,136;CL:0000542,1.92e-08,53;CL:0000051,1.92e-08,53;CL:0000838,4.00e-08,52;CL:0000625,2.05e-07,11;CL:0000084,8.42e-07,25;CL:0000827,8.42e-07,25;CL:0000094,9.31e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.83e-10;18!UBERON:0006601;2.67e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-41!115;UBERON:0001049!1.56e-23!57;UBERON:0005068!1.56e-23!57;UBERON:0006241!1.56e-23!57;UBERON:0007135!1.56e-23!57;UBERON:0001017!8.66e-23!82;UBERON:0005743!1.48e-22!86;UBERON:0000073!4.50e-22!94;UBERON:0001016!4.50e-22!94;UBERON:0002780!1.28e-20!41;UBERON:0001890!1.28e-20!41;UBERON:0006240!1.28e-20!41;UBERON:0003080!1.57e-19!42;UBERON:0000955!4.96e-18!69;UBERON:0006238!4.96e-18!69;UBERON:0002616!6.13e-18!59;UBERON:0002020!2.25e-17!34;UBERON:0003528!2.25e-17!34;UBERON:0001893!3.19e-17!34;UBERON:0002791!1.27e-16!33;UBERON:0001869!2.81e-16!32;UBERON:0003075!3.78e-15!86;UBERON:0007284!3.78e-15!86;UBERON:0002619!4.00e-15!22;UBERON:0002346!2.87e-14!90;UBERON:0001950!8.46e-14!20;UBERON:0003056!4.17e-12!61;UBERON:0000956!4.27e-12!25;UBERON:0000203!4.27e-12!25;UBERON:0000153!2.09e-08!129;UBERON:0007811!2.09e-08!129;UBERON:0000178!4.33e-08!15;UBERON:0000179!4.33e-08!15;UBERON:0000463!4.33e-08!15;UBERON:0000033!1.15e-07!123;UBERON:0004121!2.13e-07!169;UBERON:0000924!4.08e-07!173;UBERON:0006601!4.08e-07!173;UBERON:0002420!5.52e-07!9;UBERON:0007245!5.52e-07!9;UBERON:0010009!5.52e-07!9;UBERON:0010011!5.52e-07!9;UBERON:0000454!5.52e-07!9;UBERON:0002308!7.14e-07!9;UBERON:0000125!7.14e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.32e-21;41!UBERON:0001890;1.32e-21;41!UBERON:0003528;2.91e-21;34!UBERON:0002020;2.91e-21;34!UBERON:0001869;4.23e-21;32!UBERON:0001893;4.33e-21;34!UBERON:0002619;4.61e-21;22!UBERON:0002791;6.15e-21;32!UBERON:0000073;1.37e-19;53!UBERON:0002616;1.37e-19;53!UBERON:0001950;3.69e-19;20!UBERON:0000956;1.82e-17;25!UBERON:0000203;1.82e-17;25!UBERON:0001017;9.32e-14;75!UBERON:0000955;8.73e-13;68!UBERON:0007023;2.44e-12;114!UBERON:0001016;2.61e-12;83!UBERON:0000178;1.65e-10;15!UBERON:0000179;1.65e-10;15!UBERON:0000463;1.65e-10;15!UBERON:0002420;2.41e-09;9!UBERON:0007245;2.41e-09;9!UBERON:0010009;2.41e-09;9!UBERON:0010011;2.41e-09;9!UBERON:0000454;2.41e-09;9!UBERON:0000125;3.47e-09;9!UBERON:0002308;3.47e-09;9!UBERON:0009663;2.11e-07;7!UBERON:0001871;4.65e-07;6!UBERON:0000200;4.90e-07;6!UBERON:0004732;7.79e-07;13 | |||
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| ||
|short_description=p5@RABGAP1L | |short_description=p5@RABGAP1L | ||
}} | }} |
Latest revision as of 19:11, 18 September 2015
Short description: | p5@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RABGAP1L_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_NM_001243765_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | Q5R372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.68e-10 | 18 |
alpha-beta T cell | 1.68e-10 | 18 |
immature T cell | 1.68e-10 | 18 |
mature T cell | 1.68e-10 | 18 |
immature alpha-beta T cell | 1.68e-10 | 18 |
leukocyte | 2.74e-09 | 136 |
lymphocyte | 1.92e-08 | 53 |
common lymphoid progenitor | 1.92e-08 | 53 |
lymphoid lineage restricted progenitor cell | 4.00e-08 | 52 |
CD8-positive, alpha-beta T cell | 2.05e-07 | 11 |
T cell | 8.42e-07 | 25 |
pro-T cell | 8.42e-07 | 25 |
granulocyte | 9.31e-07 | 8 |