FFCP PHASE1:Hg19::chr10:73848209..73848220,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:73848209..73848220,- to FFCP PHASE1:Hg19::chr10:73848209..73848220,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9806 | |EntrezGene=9806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13564 | |HGNC=13564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_ENST00000495888_5end | |||
|cluster_id=chr10:73848209..73848220,- | |||
|coexpression_cluster_id=C676 | |||
|description=CAGE_peak_7_at_SPOCK2_5end | |||
|id=chr10:73848209..73848220,- | |||
|ontology_enrichment_celltype=CL:0000791!7.04e-14!18;CL:0000789!7.04e-14!18;CL:0002420!7.04e-14!18;CL:0002419!7.04e-14!18;CL:0000790!7.04e-14!18;CL:0000542!1.06e-09!53;CL:0000051!1.06e-09!53;CL:0000838!2.74e-09!52;CL:0000084!2.91e-08!25;CL:0000827!2.91e-08!25;CL:0000625!3.36e-08!11;CL:0000738!3.94e-07!140;CL:1000507!8.05e-07!12;CL:1000494!8.05e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.23e-20;18!CL:0000789;2.23e-20;18!CL:0002419;2.23e-20;18!CL:0000084;3.20e-13;25!CL:0000625;1.01e-11;11!CL:1000507;2.59e-10;10!CL:1000494;2.59e-10;10!CL:0000624;2.24e-09;6!CL:1000449;5.29e-08;15!CL:0000094;7.33e-08;8!CL:1000497;8.60e-07;17!CL:0002518;8.60e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.96e-20,18;CL:0000789,1.96e-20,18;CL:0002420,1.96e-20,18;CL:0002419,1.96e-20,18;CL:0000790,1.96e-20,18;CL:0000084,2.92e-13,25;CL:0000827,2.92e-13,25;CL:0000625,7.40e-12,11;CL:1000507,2.01e-10,10;CL:1000494,2.01e-10,10;CL:0000542,7.68e-10,53;CL:0000051,7.68e-10,53;CL:0000624,2.58e-09,6;CL:0000838,2.67e-09,52;CL:1000449,4.47e-08,15;CL:0000094,6.79e-08,8;CL:1000497,7.45e-07,17;CL:0002518,7.45e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000790;2.23e-20;18!UBERON:0006601;2.80e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.57e-47!115;UBERON:0001049!5.19e-41!57;UBERON:0005068!5.19e-41!57;UBERON:0006241!5.19e-41!57;UBERON:0007135!5.19e-41!57;UBERON:0002616!2.70e-33!59;UBERON:0002780!6.95e-31!41;UBERON:0001890!6.95e-31!41;UBERON:0006240!6.95e-31!41;UBERON:0003080!9.10e-30!42;UBERON:0001017!1.95e-28!82;UBERON:0000955!7.70e-28!69;UBERON:0006238!7.70e-28!69;UBERON:0005743!2.97e-27!86;UBERON:0003075!5.66e-26!86;UBERON:0007284!5.66e-26!86;UBERON:0002020!6.40e-26!34;UBERON:0003528!6.40e-26!34;UBERON:0001893!7.19e-26!34;UBERON:0002791!6.44e-25!33;UBERON:0001869!3.17e-24!32;UBERON:0002346!8.08e-24!90;UBERON:0000073!1.52e-22!94;UBERON:0001016!1.52e-22!94;UBERON:0000956!1.60e-18!25;UBERON:0000203!1.60e-18!25;UBERON:0002619!3.64e-17!22;UBERON:0003056!8.03e-17!61;UBERON:0001950!2.27e-15!20;UBERON:0000025!3.50e-15!194;UBERON:0003076!3.96e-12!15;UBERON:0003057!3.96e-12!15;UBERON:0000153!9.37e-12!129;UBERON:0007811!9.37e-12!129;UBERON:0000033!4.81e-10!123;UBERON:0004111!1.22e-09!241;UBERON:0004733!1.32e-09!12;UBERON:0002028!1.32e-09!12;UBERON:0007277!1.32e-09!12;UBERON:0002308!6.97e-09!9;UBERON:0000125!6.97e-09!9;UBERON:0002420!7.45e-09!9;UBERON:0007245!7.45e-09!9;UBERON:0010009!7.45e-09!9;UBERON:0010011!7.45e-09!9;UBERON:0000454!7.45e-09!9;UBERON:0004732!1.43e-08!13;UBERON:0000477!4.72e-08!286;UBERON:0009663!4.65e-07!7;UBERON:0004121!5.74e-07!169;UBERON:0000200!5.85e-07!6;UBERON:0002680!6.11e-07!9;UBERON:0001895!6.11e-07!9;UBERON:0010092!6.11e-07!9;UBERON:0009773!8.05e-07!12;UBERON:0001231!8.05e-07!12;UBERON:0004810!8.05e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.46e-29;34!UBERON:0000073;2.51e-28;53!UBERON:0002616;2.51e-28;53!UBERON:0003528;5.10e-28;34!UBERON:0002020;5.10e-28;34!UBERON:0002780;3.03e-27;41!UBERON:0001890;3.03e-27;41!UBERON:0001869;3.61e-27;32!UBERON:0002791;5.21e-27;32!UBERON:0002619;6.39e-24;22!UBERON:0000956;2.51e-22;25!UBERON:0000203;2.51e-22;25!UBERON:0001950;2.90e-21;20!UBERON:0000955;1.13e-16;68!UBERON:0001017;1.77e-16;75!UBERON:0001016;8.30e-13;83!UBERON:0000125;1.38e-12;9!UBERON:0002308;1.38e-12;9!UBERON:0002420;1.72e-12;9!UBERON:0007245;1.72e-12;9!UBERON:0010009;1.72e-12;9!UBERON:0010011;1.72e-12;9!UBERON:0000454;1.72e-12;9!UBERON:0007023;8.89e-12;114!UBERON:0004733;1.93e-10;12!UBERON:0002028;1.93e-10;12!UBERON:0004211;2.59e-10;10!UBERON:0009773;2.59e-10;10!UBERON:0001231;2.59e-10;10!UBERON:0004810;2.59e-10;10!UBERON:0002298;3.97e-10;6!UBERON:0000200;8.21e-10;6!UBERON:0009663;8.25e-10;7!UBERON:0004732;1.88e-09;13!UBERON:0000349;2.45e-08;5!UBERON:0001872;4.42e-08;5!UBERON:0006555;5.29e-08;15!UBERON:0004819;5.29e-08;15!UBERON:0001285;5.29e-08;15!UBERON:0007684;5.29e-08;15!UBERON:0000489;7.54e-08;29!UBERON:0001894;4.98e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.79e-52,56;UBERON:0005068,2.79e-52,56;UBERON:0006241,2.79e-52,56;UBERON:0007135,2.79e-52,56;UBERON:0000073,2.65e-48,53;UBERON:0002616,2.65e-48,53;UBERON:0002780,7.22e-39,41;UBERON:0001890,7.22e-39,41;UBERON:0003080,7.22e-39,41;UBERON:0006240,7.22e-39,41;UBERON:0000955,1.63e-37,68;UBERON:0006238,1.63e-37,68;UBERON:0007023,8.62e-37,114;UBERON:0001017,6.78e-36,81;UBERON:0003528,2.69e-33,34;UBERON:0002020,2.69e-33,34;UBERON:0001893,3.17e-33,34;UBERON:0003075,4.11e-32,82;UBERON:0007284,4.11e-32,82;UBERON:0001869,8.79e-31,32;UBERON:0001016,1.08e-30,89;UBERON:0002791,1.44e-30,32;UBERON:0002346,7.05e-30,86;UBERON:0002619,5.57e-24,22;UBERON:0003056,9.04e-24,61;UBERON:0000956,2.34e-22,25;UBERON:0000203,2.34e-22,25;UBERON:0010371,5.18e-22,104;UBERON:0001950,2.75e-21,20;UBERON:0000025,7.80e-17,192;UBERON:0010314,9.82e-17,132;UBERON:0003076,4.39e-14,15;UBERON:0003057,4.39e-14,15;UBERON:0000125,1.35e-12,9;UBERON:0002308,1.35e-12,9;UBERON:0002420,1.49e-12,9;UBERON:0007245,1.49e-12,9;UBERON:0010009,1.49e-12,9;UBERON:0010011,1.49e-12,9;UBERON:0000454,1.49e-12,9;UBERON:0004810,2.01e-10,10;UBERON:0004733,2.02e-10,12;UBERON:0002028,2.02e-10,12;UBERON:0007277,2.02e-10,12;UBERON:0002298,4.36e-10,6;UBERON:0004111,6.93e-10,240;UBERON:0009663,7.42e-10,7;UBERON:0000200,1.05e-09,6;UBERON:0004121,1.33e-09,171;UBERON:0000924,1.33e-09,171;UBERON:0006601,1.33e-09,171;UBERON:0004732,1.96e-09,13;UBERON:0011216,7.15e-09,223;UBERON:0000349,2.36e-08,5;UBERON:0001872,3.82e-08,5;UBERON:0004211,4.47e-08,15;UBERON:0009773,4.47e-08,15;UBERON:0001231,4.47e-08,15;UBERON:0001285,4.47e-08,15;UBERON:0007684,4.47e-08,15;UBERON:0004208,4.47e-08,15;UBERON:0006555,2.00e-07,16;UBERON:0004819,2.00e-07,16;UBERON:0000489,4.24e-07,31;UBERON:0001894,5.42e-07,7;UBERON:0006222,5.42e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.68600904752263,12.5604210235037,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,1.43117993565528,0.684372125364421,0.502170558379211,0,0,0,3.93364276848904,11.5148819429164,2.94150634300544,0,0,0,0,0,0,2.21598163412751,2.00544447470142,3.47217393145363,0,0,0,0,0.755751887377619,0.242584061187816,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,1.29096936716765,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0.502497330513487,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,0,0.661044872784862,0.954053754535364,1.70763890732835,4.11066032559657,5.3518251937532,1.32171328579026,3.92355994087075,0,4.32761494250433,8.25322601773246,10.896879446974,1.5046784585161,3.2592226663359,1.89379122293893,1.94826728407911,1.33692548262208,2.65145316727353,3.32300841875432,4.06205795647523,1.66518715643378,1.43065282315866,0.657751618414705,1.93445012450094,1.73881851441031,0.741432815810302,1.87278579662799,0,1.13309342697566,8.04763036564035,1.71813722741315,1.51811815211702,2.22995790026868,1.95325036156926,0,2.86092726247768,3.32765189001488,3.74792179657038,2.13099526839615,1.64225599384209,19.3542473495743,16.5812921385775,9.99288386791313,0,0,0.12786256184353,0,0,0,0,0,0,0,0,2.81605012320082,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12961773587702,17.7327684181734,12.937654491571,10.0107568298204,0.76228387266739,0,0,0.502548796003046,0,1.49801404789436,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,2.5885704098234,5.33637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,4.51199612907412,0.770153371044148,3.92174884588428,4.38417673959782,1.68882606228601,0,0,0,0,5.41892875087706,11.5388647986616,1.52925763827023,4.98645605357235,1.56712328305525,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,2.02979043692868,2.29391162142713,1.13929437434833,1.42939065274673,0.411362273086194,1.29694662238543,1.62009431171434,0,0,0,0,1.11481905075431,0,0,0,0.199579371432817,0.5745161103971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.593929361665277,0,5.96488588659779,6.04878490565205,0,0,0,0.398495976502139,0.552567831062295,0.251932747854276,0,0,0,3.86433909933505,0.179021174675609,0,0.197286811273867,0,0,4.84666373047609,7.6069840492718,0,0,0,0,0,0,0,0.344743373241465,0,0,1.77148277162768,5.66803261539417,10.6807215421958,10.83676747326,14.7773809476774,6.80094731177315,0,0,0.230850775511391,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0.995261931078505,0.353830258013357,0,0,0,0,4.92028270758942,0,10.3076356119149,0,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,3.38971111170799,0,0,5.44472845220557,6.84429839571811,0,1.70762395791482,0,0,0,0,0.14405479798815,0,0.942776138467182,0,0,0,0,4.80336230967832,3.42263447229983,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0.446342914883745,0.940568614814168,0,0,0.551482276150566,0.247247575143499,0.337017719270924,0,0,6.36183751847443,5.85674646279775,0,0,0,0,0,5.77120788251234,0,1.18208560948797,4.24882163893485,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.439656701034247,0,9.30837285803164,5.02483886622222,0,0,6.30045734149399,1.72924735609633,3.31391244277756,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,8.86068179966986,5.00307686098049,6.13435560461849,4.58727356552057,6.32295593760058,10.680581305918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,1.71553273099941,0.260994291965212,0,0,0,0,4.32322026025361,0,0,0,0,0,0,0,3.04168559533808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00987955752384,8.5017945795351,5.10828348982884,6.76884001994492,0,12.9324062108087,6.29755017964219,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0.295712172434091,7.36159672340502,5.46754669029693,6.40729069153671,8.3708869455957,1.64092442705466,0,0.496211178389294,0,0,0.535701835878287,1.3451348888753,2.42786241694653,1.59363533945908,0.532214220975833,0.230467975111559,0,12.7783097996444,9.99746158155306,0.118193840883968,0,0.313972371402056,4.39923651764805,0,0,0,0,1.85839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| ||
|short_description=p7@SPOCK2 | |||
}} | }} |
Latest revision as of 05:01, 19 September 2015
Short description: | p7@SPOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPOCK2_5end |
Coexpression cluster: | C676_serous_CD8_CD4_Natural_gall_cerebellum_Basophils |
Association with transcript: | 58bp_to_ENST00000495888_5end |
EntrezGene: | SPOCK2 |
HGNC: | 13564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.96e-20 | 18 |
alpha-beta T cell | 1.96e-20 | 18 |
immature T cell | 1.96e-20 | 18 |
mature T cell | 1.96e-20 | 18 |
immature alpha-beta T cell | 1.96e-20 | 18 |
T cell | 2.92e-13 | 25 |
pro-T cell | 2.92e-13 | 25 |
CD8-positive, alpha-beta T cell | 7.40e-12 | 11 |
kidney tubule cell | 2.01e-10 | 10 |
nephron tubule epithelial cell | 2.01e-10 | 10 |
lymphocyte | 7.68e-10 | 53 |
common lymphoid progenitor | 7.68e-10 | 53 |
CD4-positive, alpha-beta T cell | 2.58e-09 | 6 |
lymphoid lineage restricted progenitor cell | 2.67e-09 | 52 |
epithelial cell of nephron | 4.47e-08 | 15 |
granulocyte | 6.79e-08 | 8 |
kidney cell | 7.45e-07 | 17 |
kidney epithelial cell | 7.45e-07 | 17 |