FFCP PHASE1:Hg19::chr12:63328878..63328888,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57460 | |EntrezGene=57460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18583 | |HGNC=18583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_uc001srm.2_5end | |association_with_transcript=26bp_to_uc001srm.2_5end | ||
|cluster_id=chr12:63328878..63328888,- | |||
|coexpression_cluster_id=C1159 | |||
|description=CAGE_peak_5_at_PPM1H_5end | |description=CAGE_peak_5_at_PPM1H_5end | ||
|id=chr12:63328878..63328888,- | |id=chr12:63328878..63328888,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.21e-17;5!CL:0000163;7.79e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.10e-17,5;CL:0002028,1.10e-17,5;CL:0000163,7.39e-10,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.76e-16;3!UBERON:0006601;1.93e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.43e-31!115;UBERON:0001049!9.27e-28!57;UBERON:0005068!9.27e-28!57;UBERON:0006241!9.27e-28!57;UBERON:0007135!9.27e-28!57;UBERON:0005743!4.30e-24!86;UBERON:0001017!1.17e-23!82;UBERON:0002616!1.08e-21!59;UBERON:0000955!1.69e-21!69;UBERON:0006238!1.69e-21!69;UBERON:0002780!4.33e-21!41;UBERON:0001890!4.33e-21!41;UBERON:0006240!4.33e-21!41;UBERON:0003080!2.53e-20!42;UBERON:0000073!4.15e-20!94;UBERON:0001016!4.15e-20!94;UBERON:0003075!8.27e-20!86;UBERON:0007284!8.27e-20!86;UBERON:0001893!2.02e-19!34;UBERON:0002020!3.64e-19!34;UBERON:0003528!3.64e-19!34;UBERON:0002791!2.33e-18!33;UBERON:0002346!3.47e-18!90;UBERON:0001869!2.72e-17!32;UBERON:0003056!2.86e-14!61;UBERON:0002619!3.27e-13!22;UBERON:0000033!1.91e-12!123;UBERON:0000153!2.66e-12!129;UBERON:0007811!2.66e-12!129;UBERON:0001950!2.45e-11!20;UBERON:0000956!5.59e-11!25;UBERON:0000203!5.59e-11!25;UBERON:0002308!9.14e-11!9;UBERON:0000125!9.14e-11!9;UBERON:0009663!8.78e-09!7;UBERON:0004121!1.26e-08!169;UBERON:0003076!1.40e-08!15;UBERON:0003057!1.40e-08!15;UBERON:0002420!1.85e-08!9;UBERON:0007245!1.85e-08!9;UBERON:0010009!1.85e-08!9;UBERON:0010011!1.85e-08!9;UBERON:0000454!1.85e-08!9;UBERON:0000200!2.50e-08!6;UBERON:0000924!4.60e-08!173;UBERON:0006601!4.60e-08!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.97e-36;53!UBERON:0002616;2.97e-36;53!UBERON:0002780;2.48e-32;41!UBERON:0001890;2.48e-32;41!UBERON:0001893;1.07e-30;34!UBERON:0002619;6.71e-29;22!UBERON:0002791;5.20e-27;32!UBERON:0001950;9.09e-27;20!UBERON:0001869;3.16e-26;32!UBERON:0003528;3.48e-26;34!UBERON:0002020;3.48e-26;34!UBERON:0000956;2.78e-25;25!UBERON:0000203;2.78e-25;25!UBERON:0000955;5.86e-21;68!UBERON:0001017;3.26e-18;75!UBERON:0001016;5.37e-16;83!UBERON:0001870;6.59e-16;3!UBERON:0004733;1.31e-14;12!UBERON:0002028;1.31e-14;12!UBERON:0000200;6.14e-14;6!UBERON:0002680;6.33e-14;9!UBERON:0001895;6.33e-14;9!UBERON:0004732;1.92e-13;13!UBERON:0002702;2.31e-11;2!UBERON:0007023;3.79e-11;114!UBERON:0002021;1.17e-09;5!UBERON:0000125;2.52e-09;9!UBERON:0002308;2.52e-09;9!UBERON:0011216;2.38e-08;132!UBERON:0002037;2.61e-08;6!UBERON:0002298;6.17e-08;6!UBERON:0000988;1.68e-07;3!UBERON:0009663;3.06e-07;7!UBERON:0001894;3.52e-07;7!UBERON:0002038;8.79e-07;1!UBERON:0009661;8.79e-07;1!UBERON:0002950;8.79e-07;1!UBERON:0001891;8.79e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.35e-59,56;UBERON:0005068,3.35e-59,56;UBERON:0006241,3.35e-59,56;UBERON:0007135,3.35e-59,56;UBERON:0000073,5.32e-58,53;UBERON:0002616,5.32e-58,53;UBERON:0000955,6.44e-51,68;UBERON:0006238,6.44e-51,68;UBERON:0001017,2.47e-45,81;UBERON:0002780,5.73e-44,41;UBERON:0001890,5.73e-44,41;UBERON:0003080,5.73e-44,41;UBERON:0006240,5.73e-44,41;UBERON:0001016,2.75e-40,89;UBERON:0003075,8.47e-39,82;UBERON:0007284,8.47e-39,82;UBERON:0001893,5.12e-38,34;UBERON:0002346,9.66e-37,86;UBERON:0003528,2.47e-33,34;UBERON:0002020,2.47e-33,34;UBERON:0002791,4.04e-31,32;UBERON:0001869,4.72e-31,32;UBERON:0010371,2.02e-29,104;UBERON:0002619,4.99e-29,22;UBERON:0007023,7.89e-29,114;UBERON:0003056,2.62e-28,61;UBERON:0001950,5.63e-27,20;UBERON:0000956,2.14e-25,25;UBERON:0000203,2.14e-25,25;UBERON:0010314,7.21e-24,132;UBERON:0004121,2.41e-18,171;UBERON:0000924,2.41e-18,171;UBERON:0006601,2.41e-18,171;UBERON:0001870,2.15e-16,3;UBERON:0011216,3.49e-16,223;UBERON:0003076,9.34e-16,15;UBERON:0003057,9.34e-16,15;UBERON:0004733,9.10e-15,12;UBERON:0002028,9.10e-15,12;UBERON:0007277,9.10e-15,12;UBERON:0000025,1.56e-14,192;UBERON:0000200,3.31e-14,6;UBERON:0002680,4.97e-14,9;UBERON:0001895,4.97e-14,9;UBERON:0010092,4.97e-14,9;UBERON:0004732,1.38e-13,13;UBERON:0002702,1.24e-11,2;UBERON:0004111,1.96e-10,240;UBERON:0002021,1.16e-09,5;UBERON:0000125,2.62e-09,9;UBERON:0002308,2.62e-09,9;UBERON:0002037,2.37e-08,6;UBERON:0006215,2.37e-08,6;UBERON:0002298,4.73e-08,6;UBERON:0000483,1.17e-07,306;UBERON:0000988,1.43e-07,3;UBERON:0000119,1.59e-07,309;UBERON:0001894,2.62e-07,7;UBERON:0006222,2.62e-07,7;UBERON:0009663,3.52e-07,7;UBERON:0002038,9.30e-07,1;UBERON:0009661,9.30e-07,1;UBERON:0002950,9.30e-07,1;UBERON:0001891,9.30e-07,1;UBERON:0009616,9.30e-07,1;UBERON:0010286,9.30e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.434021741431704,0.223915474239924,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.69716365721711,0.414644220061482,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,2.3773077183571,6.21984346622316,4.90007841617669,3.1560608356595,0.380987365753014,0.763976851116555,0,0,0.102827492703324,1.20137223137567,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0.144269212976445,0,0.637705090915289,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.445773537109913,0,0,0,0,0,0.984685914873589,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.39152147242777,0,0.260427761085233,0,0,0,0,0.472775363535873,0,0,0,0.885741385813839,0.723578631752448,1.52581736317083,2.65390223834939,2.06883333267483,0.438770794307945,0.21787692703798,0.139423744278603,0.384751292518985,0.113942055847001,0,0,0.977826347298073,0,0.183195186803725,0,0,0,0,0.451191321234361,0,0,0,0.158936578980379,0,0,1.27217764290547,0,0,0.0884575645033392,0,0,0.247127877893006,0,2.08943512240099,0,2.34264445725339,0,0,0,0,0,0,0.695052375913368,0.150323419414493,0.207376382794494,0,0,0,0,0.569219092059585,0,0.173559738335131,0,0,0.52418000472609,0,0.0967563312890851,0,0.164230914106418,0,0,0.451961481561065,0,0,1.83601308272048,0,0,0.426905989478705,0.599428828746391,0.144090417154106,0.229073192331831,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,2.19048606227189,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,1.10296455230113,0.988990300573997,0.471824806979294,0.295282444544246,0,0.795229689809303,1.22583065500418,0.321506296930038,0,0.415440338029185,0,0.77380195455795,1.33649024647654,0,0.0788057072991982,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.58679122091228,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,3.54427271986794,0.732157589411779,1.8778639605975,0,0.443716206147409,1.61450647647597,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,1.04397716786085,0,0,0,0.71635536432595,0.308801447160972,0.657852148736121,0,0.192914038270915,0,0,1.38172136692479,0,1.7973596699725,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,1.28458450192919,0,1.43670473151436,1.43581454968528,0,2.14387482639075,1.29180516505481,0,0.196295437002051,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0.781514011233092,0.261906694481422,0,0.147856086217045,2.16120270778863,0.781078098613847,1.44680757550829,1.01465296310251,0,0,0.496211178389294,0,0.255524855279191,0,0,0,1.82129753081038,0,0,0.171488009437418,1.42736439251347,0.986591603442736,0,0.222462803784138,0.156986185701028,0.471346769748006,0,0,0.215927591218621,0,0.643288897589907,0.158013611732727,0.348724276104376,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.392600934460972,0,0,0,0,0,0.233939463462106,0,0,0,0,0.603851374266694,0,0.218559560503957,0,0,0,0.588925401344836,0.594092800654172,1.6906229103336,0,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,3.01013124618048,0,2.24371917630019,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0.305966489225945,0,0.459474497674225,0.50141507858475,0.151557396436479,0,0.829169439458779,2.48239190068549,0.213233981900981,0,0,0.186224142887574,0,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0.502055437748735,0,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.434021741431704,0.223915474239924,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.69716365721711,0.414644220061482,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,2.3773077183571,6.21984346622316,4.90007841617669,3.1560608356595,0.380987365753014,0.763976851116555,0,0,0.102827492703324,1.20137223137567,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0.144269212976445,0,0.637705090915289,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0.445773537109913,0,0,0,0,0,0.984685914873589,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.39152147242777,0,0.260427761085233,0,0,0,0,0.472775363535873,0,0,0,0.885741385813839,0.723578631752448,1.52581736317083,2.65390223834939,2.06883333267483,0.438770794307945,0.21787692703798,0.139423744278603,0.384751292518985,0.113942055847001,0,0,0.977826347298073,0,0.183195186803725,0,0,0,0,0.451191321234361,0,0,0,0.158936578980379,0,0,1.27217764290547,0,0,0.0884575645033392,0,0,0.247127877893006,0,2.08943512240099,0,2.34264445725339,0,0,0,0,0,0,0.695052375913368,0.150323419414493,0.207376382794494,0,0,0,0,0.569219092059585,0,0.173559738335131,0,0,0.52418000472609,0,0.0967563312890851,0,0.164230914106418,0,0,0.451961481561065,0,0,1.83601308272048,0,0,0.426905989478705,0.599428828746391,0.144090417154106,0.229073192331831,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,2.19048606227189,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,1.10296455230113,0.988990300573997,0.471824806979294,0.295282444544246,0,0.795229689809303,1.22583065500418,0.321506296930038,0,0.415440338029185,0,0.77380195455795,1.33649024647654,0,0.0788057072991982,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.58679122091228,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,3.54427271986794,0.732157589411779,1.8778639605975,0,0.443716206147409,1.61450647647597,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,1.04397716786085,0,0,0,0.71635536432595,0.308801447160972,0.657852148736121,0,0.192914038270915,0,0,1.38172136692479,0,1.7973596699725,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,1.28458450192919,0,1.43670473151436,1.43581454968528,0,2.14387482639075,1.29180516505481,0,0.196295437002051,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0.781514011233092,0.261906694481422,0,0.147856086217045,2.16120270778863,0.781078098613847,1.44680757550829,1.01465296310251,0,0,0.496211178389294,0,0.255524855279191,0,0,0,1.82129753081038,0,0,0.171488009437418,1.42736439251347,0.986591603442736,0,0.222462803784138,0.156986185701028,0.471346769748006,0,0,0.215927591218621,0,0.643288897589907,0.158013611732727,0.348724276104376,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.392600934460972,0,0,0,0,0,0.233939463462106,0,0,0,0,0.603851374266694,0,0.218559560503957,0,0,0,0.588925401344836,0.594092800654172,1.6906229103336,0,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,3.01013124618048,0,2.24371917630019,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0.305966489225945,0,0.459474497674225,0.50141507858475,0.151557396436479,0,0.829169439458779,2.48239190068549,0.213233981900981,0,0,0.186224142887574,0,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0.502055437748735,0,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | ||
|short_description=p5@PPM1H | |short_description=p5@PPM1H | ||
}} | }} |
Latest revision as of 19:13, 19 September 2015
Short description: | p5@PPM1H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPM1H_5end |
Coexpression cluster: | C1159_Mast_cerebellum_colon_choriocarcinoma_H9_Melanocyte_occipital |
Association with transcript: | 26bp_to_uc001srm.2_5end |
EntrezGene: | PPM1H |
HGNC: | 18583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.10e-17 | 5 |
basophil mast progenitor cell | 1.10e-17 | 5 |
endocrine cell | 7.39e-10 | 9 |