FFCP PHASE1:Hg19::chr17:38256872..38256874,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:38256872..38256874,- to FFCP PHASE1:Hg19::chr17:38256872..38256874,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9572 | |EntrezGene=9572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7962 | |HGNC=7962 | ||
|TSSclassifier=strong | |||
|UniProt=F1D8S3,P20393 | |UniProt=F1D8S3,P20393 | ||
|association_with_transcript=98bp_to_NM_021724,uc002htz.1,uc010cwq.1_5end | |||
|cluster_id=chr17:38256872..38256874,- | |||
|description=CAGE_peak_10_at_NR1D1_5end | |||
|id=chr17:38256872..38256874,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;1.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.17e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.48e-20;3!UBERON:0006601;2.10e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.99e-22!115;UBERON:0002346!1.65e-15!90;UBERON:0001049!1.79e-15!57;UBERON:0005068!1.79e-15!57;UBERON:0006241!1.79e-15!57;UBERON:0007135!1.79e-15!57;UBERON:0003075!8.12e-15!86;UBERON:0007284!8.12e-15!86;UBERON:0000073!1.09e-13!94;UBERON:0001016!1.09e-13!94;UBERON:0000924!1.38e-13!173;UBERON:0006601!1.38e-13!173;UBERON:0000955!4.07e-13!69;UBERON:0006238!4.07e-13!69;UBERON:0004121!6.33e-13!169;UBERON:0005743!9.69e-13!86;UBERON:0003080!1.21e-12!42;UBERON:0001017!1.67e-12!82;UBERON:0002616!2.30e-12!59;UBERON:0002780!4.81e-12!41;UBERON:0001890!4.81e-12!41;UBERON:0006240!4.81e-12!41;UBERON:0000033!5.27e-11!123;UBERON:0000153!8.84e-11!129;UBERON:0007811!8.84e-11!129;UBERON:0003056!4.52e-10!61;UBERON:0001893!2.66e-09!34;UBERON:0001869!5.62e-09!32;UBERON:0002791!1.16e-08!33;UBERON:0002020!1.26e-08!34;UBERON:0003528!1.26e-08!34;UBERON:0001950!3.98e-08!20;UBERON:0002619!6.49e-08!22;UBERON:0000062!4.86e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.81e-28;20!UBERON:0001869;5.31e-27;32!UBERON:0001893;1.12e-26;34!UBERON:0002619;1.50e-25;22!UBERON:0002791;1.40e-22;32!UBERON:0000956;2.10e-22;25!UBERON:0000203;2.10e-22;25!UBERON:0002780;2.51e-21;41!UBERON:0001890;2.51e-21;41!UBERON:0000073;3.80e-21;53!UBERON:0002616;3.80e-21;53!UBERON:0003528;7.77e-21;34!UBERON:0002020;7.77e-21;34!UBERON:0001872;2.98e-20;5!UBERON:0000955;2.84e-18;68!UBERON:0000200;6.48e-17;6!UBERON:0001905;6.22e-14;2!UBERON:0002757;6.22e-14;2!UBERON:0010134;6.22e-14;2!UBERON:0005408;6.22e-14;2!UBERON:0001899;6.22e-14;2!UBERON:0001017;8.96e-14;75!UBERON:0002037;2.00e-10;6!UBERON:0001016;3.04e-10;83!UBERON:0004733;7.88e-09;12!UBERON:0002028;7.88e-09;12!UBERON:0004732;3.72e-08;13!UBERON:0002581;1.34e-07;1!UBERON:0002902;1.34e-07;1!UBERON:0001882;1.34e-07;1!UBERON:0002022;1.34e-07;1!UBERON:0000996;1.34e-07;1!UBERON:0002134;1.34e-07;1!UBERON:0005208;1.34e-07;1!UBERON:0009899;1.34e-07;1!UBERON:0004145;1.34e-07;1!UBERON:0005946;1.34e-07;1!UBERON:0007190;1.34e-07;1!UBERON:0005403;1.34e-07;1!UBERON:0005965;1.34e-07;1!UBERON:0002078;1.34e-07;1!UBERON:0003296;2.17e-07;4!UBERON:0010133;2.17e-07;4!UBERON:0002784;2.17e-07;4!UBERON:0000369;3.48e-07;4!UBERON:0002435;3.48e-07;4!UBERON:0000204;3.48e-07;4!UBERON:0002680;4.30e-07;9!UBERON:0001895;4.30e-07;9!UBERON:0007023;8.15e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.60e-38,53;UBERON:0002616,2.60e-38,53;UBERON:0001049,4.31e-36,56;UBERON:0005068,4.31e-36,56;UBERON:0006241,4.31e-36,56;UBERON:0007135,4.31e-36,56;UBERON:0000955,4.41e-32,68;UBERON:0006238,4.41e-32,68;UBERON:0002780,1.55e-30,41;UBERON:0001890,1.55e-30,41;UBERON:0003080,1.55e-30,41;UBERON:0006240,1.55e-30,41;UBERON:0001869,2.10e-29,32;UBERON:0003075,3.04e-29,82;UBERON:0007284,3.04e-29,82;UBERON:0001950,3.45e-28,20;UBERON:0002346,1.06e-27,86;UBERON:0001893,1.40e-27,34;UBERON:0001017,2.04e-26,81;UBERON:0002619,1.37e-25,22;UBERON:0002791,6.10e-25,32;UBERON:0001016,1.97e-23,89;UBERON:0003528,2.19e-23,34;UBERON:0002020,2.19e-23,34;UBERON:0007023,1.88e-22,114;UBERON:0000956,1.94e-22,25;UBERON:0000203,1.94e-22,25;UBERON:0010371,3.19e-22,104;UBERON:0001872,2.02e-20,5;UBERON:0003056,1.04e-19,61;UBERON:0000200,9.91e-17,6;UBERON:0010314,1.21e-16,132;UBERON:0004121,1.40e-14,171;UBERON:0000924,1.40e-14,171;UBERON:0006601,1.40e-14,171;UBERON:0001905,5.17e-14,2;UBERON:0002757,5.17e-14,2;UBERON:0010134,5.17e-14,2;UBERON:0005408,5.17e-14,2;UBERON:0001899,5.17e-14,2;UBERON:0000025,1.12e-12,192;UBERON:0004111,1.17e-12,240;UBERON:0011216,2.97e-11,223;UBERON:0002037,1.44e-10,6;UBERON:0006215,1.44e-10,6;UBERON:0004145,2.87e-09,3;UBERON:0004733,7.15e-09,12;UBERON:0002028,7.15e-09,12;UBERON:0007277,7.15e-09,12;UBERON:0004732,3.40e-08,13;UBERON:0002902,6.37e-08,1;UBERON:0009899,6.37e-08,1;UBERON:0002134,9.44e-08,1;UBERON:0005208,9.44e-08,1;UBERON:0005946,9.44e-08,1;UBERON:0005965,9.44e-08,1;UBERON:0002078,9.44e-08,1;UBERON:0002581,1.01e-07,1;UBERON:0000996,1.15e-07,1;UBERON:0007190,1.22e-07,1;UBERON:0001882,1.80e-07,1;UBERON:0005403,1.80e-07,1;UBERON:0003296,1.98e-07,4;UBERON:0010133,1.98e-07,4;UBERON:0002784,1.98e-07,4;UBERON:0002022,2.98e-07,1;UBERON:0002680,3.47e-07,9;UBERON:0001895,3.47e-07,9;UBERON:0010092,3.47e-07,9;UBERON:0003076,4.13e-07,15;UBERON:0003057,4.13e-07,15;UBERON:0000369,5.38e-07,4;UBERON:0002435,5.38e-07,4;UBERON:0000204,5.38e-07,4;UBERON:0010082,5.38e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,1.10926203050036,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0.422510572623884,0.212604299965044,0,0.22465726229299,0.150176892841506,0,0.855038231223746,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0.121973706129595,0.265059536642971,0.232387885739037,0.414644220061482,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.245976877086227,0,0,0,0.100528972411631,0.555530670951178,0.651616610620649,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0.576479813667846,0,0.190493682876507,0,0,0,0,0,1.14330573052231,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0.206768026122887,0.215714200818617,0.213455115606889,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0,0.511707249066704,0.321707842287215,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,1.54227252690289,0.541892875087706,0,0,0,0.223874754722178,0,0,0,0.656029291399411,0,0.309123034943167,0,0.082509499920588,0,0,0,0.290012154876366,0,0,0.137836572484531,0,0,0.0852266274161009,0.267096106940212,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.71623345421307,0.890894042497916,0,0.994147647766298,0.422008249231538,0.222617410045812,0,0.422250816255987,0.796991953004279,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,1.28236427328014,0,0,0.969332746095218,0.927680981618513,1.99613798001194,0,0.0874599999961957,0.724999575434793,0.341380344856499,0.508507300585533,0.236387681767936,0,0,0,0,1.08536794762867,3.05163472634166,3.20679853800551,1.77328571372128,0.438770794307945,0.32681539055697,0.139423744278603,0.923403102045565,0.341826167541004,0,0.179515288819544,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0,0,0.442287822516696,0,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0.182454789215666,0.19566461893209,0.242780379534093,0,0,0,0.568679216656392,0,0,0.664653872707185,0,0,1.19472429772959,0,0,0,0.0979923974143777,0.174118413160805,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.193978032976839,0.0882561266915003,1.58186518546373,0,0.19871461170299,0.633107959558787,0.195551382734803,0.240476460754601,0,0,0,0.114536596165916,0.171594997861965,0.288109595976299,0.49701014226173,0,0,0,0.203996435272644,0,0.600420288709789,0.273810757783986,0,0,0,0.558564802544508,0.458320848023367,1.43574604915363,0.199679000498991,0,0,0.335917362433631,0,0,0.157566364614447,0.329663433524666,0,0,0.0846733320657845,0,0.408610218334727,0,0,0,0.449947783103001,0,1.03274246318642,0,0.315222829196793,0.367182116944987,0.528001682597033,0.179287339332845,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0.082092520749339,0.340776043570843,0.113312091520126,0.293104467356165,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.533937062838473,0.157204305099666,0,0,0,0,0.6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| ||
|short_description=p10@NR1D1 | |||
}} | }} |
Latest revision as of 00:03, 20 September 2015
Short description: | p10@NR1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NR1D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 98bp_to_NM_021724, uc002htz.1, uc010cwq.1_5end |
EntrezGene: | NR1D1 |
HGNC: | 7962 |
UniProt: | F1D8S3P20393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.17e-07 | 1 |