FFCP PHASE1:Hg19::chr19:55691488..55691551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6861 | |EntrezGene=6861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11513 | |HGNC=11513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000537500_5end | |association_with_transcript=-16bp_to_ENST00000537500_5end | ||
|cluster_id=chr19:55691488..55691551,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SYT5_5end | |description=CAGE_peak_1_at_SYT5_5end | ||
|id=chr19:55691488..55691551,- | |id=chr19:55691488..55691551,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.28e-13;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.86e-73,56;UBERON:0005068,1.86e-73,56;UBERON:0006241,1.86e-73,56;UBERON:0007135,1.86e-73,56;UBERON:0000073,1.62e-71,53;UBERON:0002616,1.62e-71,53;UBERON:0001017,5.26e-69,81;UBERON:0001016,1.60e-67,89;UBERON:0002780,7.75e-65,41;UBERON:0001890,7.75e-65,41;UBERON:0003080,7.75e-65,41;UBERON:0006240,7.75e-65,41;UBERON:0000955,3.20e-63,68;UBERON:0006238,3.20e-63,68;UBERON:0001869,2.19e-55,32;UBERON:0001893,3.86e-55,34;UBERON:0003528,6.83e-55,34;UBERON:0002020,6.83e-55,34;UBERON:0002791,2.47e-51,32;UBERON:0003075,4.06e-50,82;UBERON:0007284,4.06e-50,82;UBERON:0002619,2.52e-47,22;UBERON:0002346,4.02e-47,86;UBERON:0003056,1.32e-44,61;UBERON:0001950,1.49e-43,20;UBERON:0000956,5.47e-41,25;UBERON:0000203,5.47e-41,25;UBERON:0010371,6.12e-40,104;UBERON:0011216,5.23e-33,223;UBERON:0007023,1.62e-32,114;UBERON:0004121,1.64e-32,171;UBERON:0000924,1.64e-32,171;UBERON:0006601,1.64e-32,171;UBERON:0010314,3.29e-27,132;UBERON:0000025,7.88e-17,192;UBERON:0002420,1.65e-15,9;UBERON:0007245,1.65e-15,9;UBERON:0010009,1.65e-15,9;UBERON:0010011,1.65e-15,9;UBERON:0000454,1.65e-15,9;UBERON:0001871,3.88e-15,6;UBERON:0000125,4.74e-15,9;UBERON:0002308,4.74e-15,9;UBERON:0000200,1.29e-13,6;UBERON:0004111,5.30e-12,240;UBERON:0002021,6.05e-12,5;UBERON:0001872,1.04e-11,5;UBERON:0009663,1.21e-11,7;UBERON:0002298,1.72e-11,6;UBERON:0000349,1.83e-11,5;UBERON:0003076,5.03e-11,15;UBERON:0003057,5.03e-11,15;UBERON:0001894,7.79e-11,7;UBERON:0006222,7.79e-11,7;UBERON:0004732,2.22e-10,13;UBERON:0000369,2.57e-10,4;UBERON:0002435,2.57e-10,4;UBERON:0000204,2.57e-10,4;UBERON:0010082,2.57e-10,4;UBERON:0004733,4.54e-09,12;UBERON:0002028,4.54e-09,12;UBERON:0007277,4.54e-09,12;UBERON:0005383,3.86e-08,3;UBERON:0005382,3.86e-08,3;UBERON:0000483,4.94e-08,306;UBERON:0000119,7.97e-08,309;UBERON:0001870,1.70e-07,3;UBERON:0000988,6.04e-07,3 | |||
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| ||
|short_description=p1@SYT5 | |short_description=p1@SYT5 | ||
}} | }} |
Latest revision as of 00:42, 20 September 2015
Short description: | p1@SYT5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYT5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -16bp_to_ENST00000537500_5end |
EntrezGene: | SYT5 |
HGNC: | 11513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data