FFCP PHASE1:Hg19::chr5:140718370..140718395,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:140718370..140718395,+
|short_description=p2@PCDHGA2
|description=CAGE_peak_2_at_PCDHGA2_5end
|association_with_transcript=16bp_to_NM_018915,NM_032009,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56113 | |EntrezGene=56113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8700 | |HGNC=8700 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5H1 | |UniProt=Q9Y5H1 | ||
|association_with_transcript=16bp_to_NM_018915,NM_032009,uc003ljk.1,uc011dao.1_5end | |||
|cluster_id=chr5:140718370..140718395,+ | |||
|description=CAGE_peak_2_at_PCDHGA2_5end | |||
|id=chr5:140718370..140718395,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.00e-06;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.62e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.73e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;2.09e-28;22!UBERON:0003528;2.31e-28;34!UBERON:0002020;2.31e-28;34!UBERON:0002780;7.36e-28;41!UBERON:0001890;7.36e-28;41!UBERON:0001950;1.42e-27;20!UBERON:0001893;7.22e-27;34!UBERON:0001869;1.73e-25;32!UBERON:0002791;6.98e-25;32!UBERON:0000956;1.37e-24;25!UBERON:0000203;1.37e-24;25!UBERON:0000073;3.06e-22;53!UBERON:0002616;3.06e-22;53!UBERON:0001017;3.76e-16;75!UBERON:0001016;3.20e-15;83!UBERON:0000955;1.44e-13;68!UBERON:0001872;4.65e-13;5!UBERON:0007023;1.07e-11;114!UBERON:0000125;2.42e-09;9!UBERON:0002308;2.42e-09;9!UBERON:0001871;3.25e-09;6!UBERON:0000200;1.47e-07;6!UBERON:0002298;2.75e-07;6!UBERON:0001905;4.77e-07;2!UBERON:0002757;4.77e-07;2!UBERON:0010134;4.77e-07;2!UBERON:0005408;4.77e-07;2!UBERON:0001899;4.77e-07;2!UBERON:0002784;6.18e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.56e-47,81;UBERON:0001049,1.86e-43,56;UBERON:0005068,1.86e-43,56;UBERON:0006241,1.86e-43,56;UBERON:0007135,1.86e-43,56;UBERON:0007023,2.75e-42,114;UBERON:0001016,2.79e-41,89;UBERON:0000073,3.95e-40,53;UBERON:0002616,3.95e-40,53;UBERON:0003075,2.91e-37,82;UBERON:0007284,2.91e-37,82;UBERON:0002780,5.18e-37,41;UBERON:0001890,5.18e-37,41;UBERON:0003080,5.18e-37,41;UBERON:0006240,5.18e-37,41;UBERON:0002346,4.82e-35,86;UBERON:0000955,1.96e-33,68;UBERON:0006238,1.96e-33,68;UBERON:0003528,3.74e-32,34;UBERON:0002020,3.74e-32,34;UBERON:0001893,4.83e-32,34;UBERON:0002791,1.91e-28,32;UBERON:0001869,3.17e-28,32;UBERON:0002619,6.88e-28,22;UBERON:0010371,3.59e-27,104;UBERON:0001950,4.82e-27,20;UBERON:0003056,5.89e-27,61;UBERON:0000956,3.86e-24,25;UBERON:0000203,3.86e-24,25;UBERON:0004121,2.12e-23,171;UBERON:0000924,2.12e-23,171;UBERON:0006601,2.12e-23,171;UBERON:0010314,2.66e-23,132;UBERON:0011216,1.03e-18,223;UBERON:0000025,1.89e-14,192;UBERON:0001872,1.25e-12,5;UBERON:0004111,2.60e-12,240;UBERON:0000125,2.17e-09,9;UBERON:0002308,2.17e-09,9;UBERON:0001871,3.30e-09,6;UBERON:0000483,4.74e-09,306;UBERON:0000119,7.55e-09,309;UBERON:0003076,4.51e-08,15;UBERON:0003057,4.51e-08,15;UBERON:0000200,2.65e-07,6;UBERON:0002298,2.65e-07,6;UBERON:0001905,4.63e-07,2;UBERON:0002757,4.63e-07,2;UBERON:0010134,4.63e-07,2;UBERON:0005408,4.63e-07,2;UBERON:0001899,4.63e-07,2;UBERON:0002784,5.83e-07,4;UBERON:0002420,9.73e-07,9;UBERON:0007245,9.73e-07,9;UBERON:0010009,9.73e-07,9;UBERON:0010011,9.73e-07,9;UBERON:0000454,9.73e-07,9 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0.866364470720326,0,0,0,0.730310090387373,0.975865597581014,0.246242116153576,0,0.940364164434263,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0.973269740605272,0.283604451492204,0.221729397462564,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0.17859945656816,0,0,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0,0.516628905878827,1.18800285728205,0.247266929278557,0,0,0,0,0.554128230968366,0,0.30648779579902,0.150238058906597,0,0,0,0.635795703478686,0,0.103052529238439,0,1.11670113798954,1.0126579934476,0.389748020644795,0.252433774244115,0.460249493211497,0.161646056818812,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0,0,0,0.1466765716419,0.258543431515556,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0,0.285955987316295,1.62786481617433,0,0.65147236858747,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,2.54094624222463,2.60279707715243,2.31986643833309,1.50764638800914,1.27587750330633,0,0,0,0.981531933753119,0.500170521059677,0.542530047399471,0.623912584592421,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,0,1.32845119707087,0.184369168541703,0.260650843404249,0.783204629850962,0,0,0,0,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0,0.246381468041427,0,0,0,0.200506470303285,0,0.229628896329213,0,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0.082509499920588,0.574265537996172,0,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.949138274156178,0.190630193923825,0.255897791311334,0.855877976067841,0.95460974377781,0.78494864019923,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0.430234056612155,0.196498082026242,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,1.40669416410513,0.445234820091624,0,0,1.59398390600856,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0.969332746095218,1.57705766875147,5.98841394003583,0,0,1.44999915086959,0,0.254253650292766,0,0,0.291604613383254,0,1.77148277162768,0.60298219312704,0,2.21158519862449,0.591095237907095,1.09692698576986,0,0,1.61595542857974,1.25336261431701,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.14581926067151,1.60515529459758,1.1713222286267,0,0,0,0,1.20990716048664,2.14250933141343,4.23350083510869,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0.51595809741485,0,0,0,0.484945082442097,0,2.71176888936639,0.137041924646751,0,1.07628353124994,0,0.64127056201227,2.13452994739353,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.203996435272644,0,1.20084057741958,0.958337652243951,0,0,0,2.51354161145029,1.60412296808179,0,1.79711100449092,3.43380838509257,0.223171457441873,0.940568614814168,0,0,0,0,0,0,0,0.795229689809303,2.45166131000836,0,0,0,0,0,1.27574068981852,0,0.236417121897595,1.99327434912993,0.950403028674658,0,0,0.714695326373367,1.98627591109629,0,1.08599920350743,0,0.326587360109409,2.39460383124975,0,0.170388021785422,0.226624183040251,0.439656701034247,0,1.0342636508924,1.71902382265497,0,0,1.06787412567695,1.41483874589699,0.414239055347196,0.992332043623902,0,0,0,0,0.5013797880454,0.306345576763462,0.655745261419609,0,0.886068179966986,0.976210119215705,2.1282458220105,0.573409195690071,2.99508439149501,2.35966331177257,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0,0,0.754703705257725,0.889811221596536,0.228840068396924,0.302461847526478,0.310874401165561,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0.385239660814607,0,0,0,0,0.244736704506468,0,0.926404341482917,0,0,0,0,0,0,0,2.07387654227596,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,1.05802783107205,0.3062454773532,1.027667601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| ||
|short_description=p2@PCDHGA2 | |||
}} | }} |
Latest revision as of 03:56, 25 September 2015
Short description: | p2@PCDHGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCDHGA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_NM_018915, NM_032009, uc003ljk.1, uc011dao.1_5end |
EntrezGene: | PCDHGA2 |
HGNC: | 8700 |
UniProt: | Q9Y5H1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.62e-08 | 8 |