FFCP PHASE1:Hg19::chr5:141257961..141258006,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:141257961..141258006,- to FFCP PHASE1:Hg19::chr5:141257961..141258006,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5097 | |EntrezGene=5097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8655 | |HGNC=8655 | ||
|TSSclassifier=strong | |||
|UniProt=Q08174,D6RAX3 | |UniProt=Q08174,D6RAX3 | ||
|association_with_transcript=0bp_to_ENST00000287008,ENST00000394536,ENST00000503492_5end | |||
|cluster_id=chr5:141257961..141258006,- | |||
|description=CAGE_peak_1_at_PCDH1_5end | |||
|id=chr5:141257961..141258006,- | |||
|ontology_enrichment_celltype=CL:0000066!9.81e-17!254;CL:0002139!7.60e-14!24;CL:0000115!1.76e-12!35;CL:0000071!4.50e-11!18;CL:0002546!4.50e-11!18;CL:0002078!4.97e-11!44;CL:0000213!2.26e-08!57;CL:0000215!2.26e-08!57;CL:0000076!6.08e-08!62;CL:1000413!1.82e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.50e-15;24!CL:0000115;2.25e-12;36!CL:0000071;8.26e-12;18!CL:0002078;3.68e-08;45!CL:1000413;6.34e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.43e-15,24;CL:0000066,1.13e-14,253;CL:0000115,3.32e-14,36;CL:0002078,4.01e-12,45;CL:0000071,8.21e-12,18;CL:0002546,8.21e-12,18;CL:0000213,2.05e-09,58;CL:0000215,2.05e-09,58;CL:1000413,6.31e-08,9;CL:0000076,2.17e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;8.26e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.91e-39!241;UBERON:0000025!1.43e-36!194;UBERON:0007023!1.49e-32!115;UBERON:0000477!1.05e-28!286;UBERON:0000483!2.48e-23!309;UBERON:0000119!8.95e-23!312;UBERON:0001049!8.06e-21!57;UBERON:0005068!8.06e-21!57;UBERON:0006241!8.06e-21!57;UBERON:0007135!8.06e-21!57;UBERON:0003080!3.65e-18!42;UBERON:0005743!4.15e-18!86;UBERON:0001017!1.53e-17!82;UBERON:0002780!1.54e-17!41;UBERON:0001890!1.54e-17!41;UBERON:0006240!1.54e-17!41;UBERON:0003075!7.14e-17!86;UBERON:0007284!7.14e-17!86;UBERON:0000073!1.10e-16!94;UBERON:0001016!1.10e-16!94;UBERON:0000468!1.20e-16!659;UBERON:0001893!1.59e-16!34;UBERON:0002616!2.05e-16!59;UBERON:0002020!2.40e-16!34;UBERON:0003528!2.40e-16!34;UBERON:0002791!6.15e-16!33;UBERON:0001869!6.78e-16!32;UBERON:0000467!6.56e-15!625;UBERON:0000480!1.24e-14!626;UBERON:0003914!1.67e-14!118;UBERON:0000955!1.94e-14!69;UBERON:0006238!1.94e-14!69;UBERON:0002346!2.01e-14!90;UBERON:0000481!1.43e-13!347;UBERON:0000922!4.07e-13!612;UBERON:0002619!7.85e-13!22;UBERON:0003056!7.94e-13!61;UBERON:0000956!1.74e-12!25;UBERON:0000203!1.74e-12!25;UBERON:0004121!2.17e-12!169;UBERON:0000064!4.09e-12!219;UBERON:0001950!8.30e-12!20;UBERON:0000055!3.20e-11!69;UBERON:0002050!3.39e-11!605;UBERON:0005423!3.39e-11!605;UBERON:0004872!3.78e-11!84;UBERON:0001986!4.50e-11!18;UBERON:0004638!4.50e-11!18;UBERON:0004852!4.50e-11!18;UBERON:0000923!5.23e-11!604;UBERON:0005291!5.23e-11!604;UBERON:0006598!5.23e-11!604;UBERON:0002532!5.23e-11!604;UBERON:0000924!5.38e-11!173;UBERON:0006601!5.38e-11!173;UBERON:0001981!1.26e-10!60;UBERON:0007500!1.26e-10!60;UBERON:0004537!1.26e-10!60;UBERON:0006965!1.26e-10!60;UBERON:0000475!1.52e-10!365;UBERON:0000033!8.07e-10!123;UBERON:0000487!1.28e-09!22;UBERON:0000153!1.99e-09!129;UBERON:0007811!1.99e-09!129;UBERON:0002049!2.48e-08!79;UBERON:0007798!2.48e-08!79;UBERON:0000466!4.34e-08!126;UBERON:0006914!5.89e-08!25;UBERON:0001009!8.32e-08!113;UBERON:0003915!1.82e-07!9;UBERON:0004700!1.82e-07!9;UBERON:0001917!1.82e-07!9;UBERON:0004535!5.03e-07!110;UBERON:0003103!6.53e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.21e-15;32!UBERON:0002791;2.86e-15;32!UBERON:0001893;3.86e-15;34!UBERON:0003528;4.84e-15;34!UBERON:0002020;4.84e-15;34!UBERON:0002780;8.46e-14;41!UBERON:0001890;8.46e-14;41!UBERON:0002619;1.04e-13;22!UBERON:0000956;2.55e-13;25!UBERON:0000203;2.55e-13;25!UBERON:0001950;1.34e-12;20!UBERON:0000073;6.74e-12;53!UBERON:0002616;6.74e-12;53!UBERON:0004638;8.26e-12;18!UBERON:0001986;8.26e-12;18!UBERON:0004852;8.26e-12;18!UBERON:0000487;2.20e-10;22!UBERON:0007023;2.11e-09;114!UBERON:0006914;1.85e-08;25!UBERON:0003915;6.34e-08;9!UBERON:0004700;6.34e-08;9!UBERON:0001917;6.34e-08;9!UBERON:0000955;2.41e-07;68!UBERON:0001017;7.09e-07;75 | |||
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| ||
|short_description=p1@PCDH1 | |||
}} | }} |
Latest revision as of 05:26, 25 September 2015
Short description: | p1@PCDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000287008, ENST00000394536, ENST00000503492_5end |
EntrezGene: | PCDH1 |
HGNC: | 8655 |
UniProt: | Q08174D6RAX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.43e-15 | 24 |
epithelial cell | 1.13e-14 | 253 |
endothelial cell | 3.32e-14 | 36 |
meso-epithelial cell | 4.01e-12 | 45 |
blood vessel endothelial cell | 8.21e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.21e-12 | 18 |
lining cell | 2.05e-09 | 58 |
barrier cell | 2.05e-09 | 58 |
endothelial cell of artery | 6.31e-08 | 9 |
squamous epithelial cell | 2.17e-07 | 63 |