Personal tools

FFCP PHASE1:Mm9::chr11:78311027..78311041,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=237868
|EntrezGene=237868
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q6PDS3
|UniProt=Q6PDS3
|association_with_transcript=-67bp_to_ENSMUST00000108287_5end
|association_with_transcript=-67bp_to_ENSMUST00000108287_5end
|cluster_id=chr11:78311027..78311041,-
|description=CAGE_peak_3_at_Sarm1_5end
|description=CAGE_peak_3_at_Sarm1_5end
|id=chr11:78311027..78311041,-
|id=chr11:78311027..78311041,-
|ontology_enrichment_celltype=CL:0002319!9.83e-21!43;CL:0000221!1.45e-20!44;CL:0000133!1.45e-20!44;CL:0000540!1.26e-19!33;CL:0000047!1.26e-19!33;CL:0000031!1.26e-19!33;CL:0000404!1.26e-19!33;CL:0000055!5.22e-18!50;CL:0000117!6.05e-18!23;CL:0000337!6.05e-18!23;CL:0000393!3.14e-17!39;CL:0000211!3.14e-17!39;CL:0002321!1.56e-08!70;CL:0000220!1.56e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-41,23;CL:0000337,2.39e-41,23;CL:0000540,1.75e-29,33;CL:0000047,1.75e-29,33;CL:0000031,1.75e-29,33;CL:0000404,1.75e-29,33;CL:0002319,3.42e-25,43;CL:0000221,1.81e-24,44;CL:0000133,1.81e-24,44;CL:0000393,5.43e-24,39;CL:0000211,5.43e-24,39;CL:0002609,1.94e-13,6;CL:0002321,5.81e-13,70;CL:0000120,7.47e-08,3;CL:0002612,1.06e-07,3;CL:0000723,1.08e-07,91;CL:0000048,1.08e-07,91;CL:0002608,1.49e-07,3;CL:0002613,2.54e-07,3;CL:0000034,7.30e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.28e-31!75;UBERON:0001016!1.28e-31!75;UBERON:0001017!1.86e-31!73;UBERON:0005743!1.86e-31!73;UBERON:0004121!1.92e-29!102;UBERON:0000924!1.92e-29!102;UBERON:0006601!1.92e-29!102;UBERON:0002346!4.01e-26!71;UBERON:0003075!4.01e-26!71;UBERON:0007284!4.01e-26!71;UBERON:0000033!2.03e-23!63;UBERON:0001049!3.61e-23!52;UBERON:0005068!3.61e-23!52;UBERON:0006241!3.61e-23!52;UBERON:0007135!3.61e-23!52;UBERON:0000955!3.92e-21!50;UBERON:0006238!3.92e-21!50;UBERON:0002616!1.71e-20!49;UBERON:0003056!1.15e-18!49;UBERON:0002020!3.80e-16!34;UBERON:0003080!2.82e-15!40;UBERON:0002780!1.08e-14!39;UBERON:0001890!1.08e-14!39;UBERON:0006240!1.08e-14!39;UBERON:0007811!9.43e-14!86;UBERON:0002791!1.77e-12!29;UBERON:0003528!1.77e-12!29;UBERON:0001893!1.77e-12!29;UBERON:0000153!1.31e-10!94;UBERON:0003076!7.91e-09!12;UBERON:0003057!7.91e-09!12;UBERON:0000956!1.01e-08!21;UBERON:0001869!1.01e-08!21;UBERON:0000203!1.01e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.99e-37,73;UBERON:0000073,6.06e-37,54;UBERON:0002020,2.78e-36,34;UBERON:0001016,3.45e-36,75;UBERON:0001049,5.95e-34,52;UBERON:0005068,5.95e-34,52;UBERON:0006241,5.95e-34,52;UBERON:0007135,5.95e-34,52;UBERON:0002346,8.20e-32,64;UBERON:0003075,8.20e-32,64;UBERON:0007284,8.20e-32,64;UBERON:0004121,1.27e-31,95;UBERON:0000924,1.27e-31,95;UBERON:0006601,1.27e-31,95;UBERON:0000955,1.31e-27,47;UBERON:0006238,1.31e-27,47;UBERON:0003528,6.76e-27,29;UBERON:0002791,6.76e-27,29;UBERON:0001893,6.76e-27,29;UBERON:0010371,7.56e-27,73;UBERON:0002616,3.22e-26,46;UBERON:0003080,6.97e-24,40;UBERON:0003056,9.45e-24,49;UBERON:0002780,1.53e-22,39;UBERON:0001890,1.53e-22,39;UBERON:0006240,1.53e-22,39;UBERON:0010314,1.47e-19,92;UBERON:0000956,1.93e-16,21;UBERON:0001869,1.93e-16,21;UBERON:0000203,1.93e-16,21;UBERON:0002420,5.81e-12,8;UBERON:0007245,5.81e-12,8;UBERON:0010009,5.81e-12,8;UBERON:0010011,5.81e-12,8;UBERON:0000454,5.81e-12,8;UBERON:0000025,3.52e-11,114;UBERON:0001948,3.83e-11,5;UBERON:0002315,3.83e-11,5;UBERON:0002619,2.35e-10,17;UBERON:0003076,2.63e-10,12;UBERON:0003057,2.63e-10,12;UBERON:0004111,6.11e-10,122;UBERON:0002240,3.36e-09,6;UBERON:0005174,3.36e-09,6;UBERON:0001137,3.36e-09,6;UBERON:0011216,2.31e-08,194;UBERON:0002950,9.91e-08,4;UBERON:0001891,9.91e-08,4;UBERON:0009616,9.91e-08,4;UBERON:0010286,9.91e-08,4;UBERON:0002257,1.06e-07,3;UBERON:0001954,1.07e-07,7;UBERON:0003022,1.07e-07,7;UBERON:0002421,1.07e-07,7;UBERON:0000349,1.07e-07,7;UBERON:0002600,1.07e-07,7;UBERON:0000369,2.65e-07,5;UBERON:0002435,2.65e-07,5;UBERON:0000204,2.65e-07,5;UBERON:0010082,2.65e-07,5
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0.70219357896598,0,0.0797721589953364,0.171200729931206,0.34968160967599,0.333109761815663,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.367093504323363,0.782391344348039,1.30815093828268,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0.725362142011344,0,0,0,0,5.05791152148994,10.0508286061686,6.33831403506179,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,3.31806759387129,5.8052553482627,4.41682418837902,2.85650984403804,2.20868540951614,3.67472397644862,5.65488279007595,5.51531271966013,1.10115880999389,0.638436690425939,1.84327839907492,3.95658863190582,5.6722339033494,2.6045668527838,1.11673199600552,2.25105044012672,1.98637722109853,7.07108605136802,3.41692033917847,6.15118171223492,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0.913396434936424,0.461230994512117,0,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,2.93225389538837,0,0,0,0,1.19832511523858,0,3.26701315493447,1.04294592115366,1.27857728665165,1.87009240103604,0.973447578406546,0.101839363850316,0.124406970610093,0,0.631325567659422,0.260240885925407,0.229902104433473,0.720248519221397,0.150704817835715,1.15662048557257,1.0249097622788,0.937017245597288,2.06962696591213,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0.469052119962192,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,1.47202963994889,3.49875682089567,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0.642202359951168,0.820481806145422,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0,0.809621403349789,1.16902343164525,0.395287777946524,1.28528526568723,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0,0,0,1.05418608574999,0,0.680879211507576,0.18006109403131,0.129358683782755,1.07168517515796,0,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0,0,0.238744688006273,0.164140899745061,0,0.741701208042039,0,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,1.84130094602871,0,2.749650917499,0,0,1.35004500046361,0.45032120322422,0.453142408984205,1.55328093525546,0.31136204275253,0.798049746802062,0.341467211508268,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.561849044819294,0.320125762024346,0.459483751644906,0,0.463537303779422,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.73171189149109,0.526139422875686,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0.578719832943424,0.999242311751784,1.40358965067245,0.429742108096597,0,0.220591419119515,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0.70219357896598,0,0.0797721589953364,0.171200729931206,0.34968160967599,0.333109761815663,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.367093504323363,0.782391344348039,1.30815093828268,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0.725362142011344,0,0,0,0,5.05791152148994,10.0508286061686,6.33831403506179,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,3.31806759387129,5.8052553482627,4.41682418837902,2.85650984403804,2.20868540951614,3.67472397644862,5.65488279007595,5.51531271966013,1.10115880999389,0.638436690425939,1.84327839907492,3.95658863190582,5.6722339033494,2.6045668527838,1.11673199600552,2.25105044012672,1.98637722109853,7.07108605136802,3.41692033917847,6.15118171223492,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0.913396434936424,0.461230994512117,0,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,2.93225389538837,0,0,0,0,1.19832511523858,0,3.26701315493447,1.04294592115366,1.27857728665165,1.87009240103604,0.973447578406546,0.101839363850316,0.124406970610093,0,0.631325567659422,0.260240885925407,0.229902104433473,0.720248519221397,0.150704817835715,1.15662048557257,1.0249097622788,0.937017245597288,2.06962696591213,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0.469052119962192,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,1.47202963994889,3.49875682089567,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0.642202359951168,0.820481806145422,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0,0.809621403349789,1.16902343164525,0.395287777946524,1.28528526568723,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0,0,0,1.05418608574999,0,0.680879211507576,0.18006109403131,0.129358683782755,1.07168517515796,0,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0,0,0.238744688006273,0.164140899745061,0,0.741701208042039,0,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,1.84130094602871,0,2.749650917499,0,0,1.35004500046361,0.45032120322422,0.453142408984205,1.55328093525546,0.31136204275253,0.798049746802062,0.341467211508268,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.561849044819294,0.320125762024346,0.459483751644906,0,0.463537303779422,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.73171189149109,0.526139422875686,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0.578719832943424,0.999242311751784,1.40358965067245,0.429742108096597,0,0.220591419119515,0
|short_description=p3@Sarm1
|short_description=p3@Sarm1
}}
}}

Latest revision as of 18:04, 25 September 2015

Short description:p3@Sarm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sarm1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -67bp_to_ENSMUST00000108287_5end
EntrezGene:Sarm1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sarm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.99e-3773
regional part of nervous system6.06e-3754
gray matter2.78e-3634
nervous system3.45e-3675
neural tube5.95e-3452
neural rod5.95e-3452
future spinal cord5.95e-3452
neural keel5.95e-3452
neurectoderm8.20e-3264
neural plate8.20e-3264
presumptive neural plate8.20e-3264
ectoderm-derived structure1.27e-3195
ectoderm1.27e-3195
presumptive ectoderm1.27e-3195
brain1.31e-2747
future brain1.31e-2747
brain grey matter6.76e-2729
regional part of telencephalon6.76e-2729
telencephalon6.76e-2729
ecto-epithelium7.56e-2773
regional part of brain3.22e-2646
anterior neural tube6.97e-2440
pre-chordal neural plate9.45e-2449
regional part of forebrain1.53e-2239
forebrain1.53e-2239
future forebrain1.53e-2239
structure with developmental contribution from neural crest1.47e-1992
cerebral cortex1.93e-1621
cerebral hemisphere1.93e-1621
pallium1.93e-1621
basal ganglion5.81e-128
nuclear complex of neuraxis5.81e-128
aggregate regional part of brain5.81e-128
collection of basal ganglia5.81e-128
cerebral subcortex5.81e-128
tube3.52e-11114
regional part of spinal cord3.83e-115
gray matter of spinal cord3.83e-115
regional part of cerebral cortex2.35e-1017
posterior neural tube2.63e-1012
chordal neural plate2.63e-1012
anatomical conduit6.11e-10122
spinal cord3.36e-096
dorsal region element3.36e-096
dorsum3.36e-096
organ system subdivision2.31e-08194
regional part of midbrain9.91e-084
midbrain9.91e-084
presumptive midbrain9.91e-084
midbrain neural tube9.91e-084
ventral horn of spinal cord1.06e-073
Ammon's horn1.07e-077
lobe parts of cerebral cortex1.07e-077
hippocampal formation1.07e-077
limbic system1.07e-077
limbic lobe1.07e-077
corpus striatum2.65e-075
striatum2.65e-075
ventral part of telencephalon2.65e-075
future corpus striatum2.65e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:78311027..78311041,-&oldid=4206031"