FFCP PHASE1:Mm9::chr11:78311027..78311041,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237868 | |EntrezGene=237868 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PDS3 | |UniProt=Q6PDS3 | ||
|association_with_transcript=-67bp_to_ENSMUST00000108287_5end | |association_with_transcript=-67bp_to_ENSMUST00000108287_5end | ||
|cluster_id=chr11:78311027..78311041,- | |||
|description=CAGE_peak_3_at_Sarm1_5end | |description=CAGE_peak_3_at_Sarm1_5end | ||
|id=chr11:78311027..78311041,- | |id=chr11:78311027..78311041,- | ||
|ontology_enrichment_celltype=CL:0002319!9.83e-21!43;CL:0000221!1.45e-20!44;CL:0000133!1.45e-20!44;CL:0000540!1.26e-19!33;CL:0000047!1.26e-19!33;CL:0000031!1.26e-19!33;CL:0000404!1.26e-19!33;CL:0000055!5.22e-18!50;CL:0000117!6.05e-18!23;CL:0000337!6.05e-18!23;CL:0000393!3.14e-17!39;CL:0000211!3.14e-17!39;CL:0002321!1.56e-08!70;CL:0000220!1.56e-08!70 | |ontology_enrichment_celltype=CL:0002319!9.83e-21!43;CL:0000221!1.45e-20!44;CL:0000133!1.45e-20!44;CL:0000540!1.26e-19!33;CL:0000047!1.26e-19!33;CL:0000031!1.26e-19!33;CL:0000404!1.26e-19!33;CL:0000055!5.22e-18!50;CL:0000117!6.05e-18!23;CL:0000337!6.05e-18!23;CL:0000393!3.14e-17!39;CL:0000211!3.14e-17!39;CL:0002321!1.56e-08!70;CL:0000220!1.56e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-41,23;CL:0000337,2.39e-41,23;CL:0000540,1.75e-29,33;CL:0000047,1.75e-29,33;CL:0000031,1.75e-29,33;CL:0000404,1.75e-29,33;CL:0002319,3.42e-25,43;CL:0000221,1.81e-24,44;CL:0000133,1.81e-24,44;CL:0000393,5.43e-24,39;CL:0000211,5.43e-24,39;CL:0002609,1.94e-13,6;CL:0002321,5.81e-13,70;CL:0000120,7.47e-08,3;CL:0002612,1.06e-07,3;CL:0000723,1.08e-07,91;CL:0000048,1.08e-07,91;CL:0002608,1.49e-07,3;CL:0002613,2.54e-07,3;CL:0000034,7.30e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.28e-31!75;UBERON:0001016!1.28e-31!75;UBERON:0001017!1.86e-31!73;UBERON:0005743!1.86e-31!73;UBERON:0004121!1.92e-29!102;UBERON:0000924!1.92e-29!102;UBERON:0006601!1.92e-29!102;UBERON:0002346!4.01e-26!71;UBERON:0003075!4.01e-26!71;UBERON:0007284!4.01e-26!71;UBERON:0000033!2.03e-23!63;UBERON:0001049!3.61e-23!52;UBERON:0005068!3.61e-23!52;UBERON:0006241!3.61e-23!52;UBERON:0007135!3.61e-23!52;UBERON:0000955!3.92e-21!50;UBERON:0006238!3.92e-21!50;UBERON:0002616!1.71e-20!49;UBERON:0003056!1.15e-18!49;UBERON:0002020!3.80e-16!34;UBERON:0003080!2.82e-15!40;UBERON:0002780!1.08e-14!39;UBERON:0001890!1.08e-14!39;UBERON:0006240!1.08e-14!39;UBERON:0007811!9.43e-14!86;UBERON:0002791!1.77e-12!29;UBERON:0003528!1.77e-12!29;UBERON:0001893!1.77e-12!29;UBERON:0000153!1.31e-10!94;UBERON:0003076!7.91e-09!12;UBERON:0003057!7.91e-09!12;UBERON:0000956!1.01e-08!21;UBERON:0001869!1.01e-08!21;UBERON:0000203!1.01e-08!21 | |ontology_enrichment_uberon=UBERON:0000073!1.28e-31!75;UBERON:0001016!1.28e-31!75;UBERON:0001017!1.86e-31!73;UBERON:0005743!1.86e-31!73;UBERON:0004121!1.92e-29!102;UBERON:0000924!1.92e-29!102;UBERON:0006601!1.92e-29!102;UBERON:0002346!4.01e-26!71;UBERON:0003075!4.01e-26!71;UBERON:0007284!4.01e-26!71;UBERON:0000033!2.03e-23!63;UBERON:0001049!3.61e-23!52;UBERON:0005068!3.61e-23!52;UBERON:0006241!3.61e-23!52;UBERON:0007135!3.61e-23!52;UBERON:0000955!3.92e-21!50;UBERON:0006238!3.92e-21!50;UBERON:0002616!1.71e-20!49;UBERON:0003056!1.15e-18!49;UBERON:0002020!3.80e-16!34;UBERON:0003080!2.82e-15!40;UBERON:0002780!1.08e-14!39;UBERON:0001890!1.08e-14!39;UBERON:0006240!1.08e-14!39;UBERON:0007811!9.43e-14!86;UBERON:0002791!1.77e-12!29;UBERON:0003528!1.77e-12!29;UBERON:0001893!1.77e-12!29;UBERON:0000153!1.31e-10!94;UBERON:0003076!7.91e-09!12;UBERON:0003057!7.91e-09!12;UBERON:0000956!1.01e-08!21;UBERON:0001869!1.01e-08!21;UBERON:0000203!1.01e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.99e-37,73;UBERON:0000073,6.06e-37,54;UBERON:0002020,2.78e-36,34;UBERON:0001016,3.45e-36,75;UBERON:0001049,5.95e-34,52;UBERON:0005068,5.95e-34,52;UBERON:0006241,5.95e-34,52;UBERON:0007135,5.95e-34,52;UBERON:0002346,8.20e-32,64;UBERON:0003075,8.20e-32,64;UBERON:0007284,8.20e-32,64;UBERON:0004121,1.27e-31,95;UBERON:0000924,1.27e-31,95;UBERON:0006601,1.27e-31,95;UBERON:0000955,1.31e-27,47;UBERON:0006238,1.31e-27,47;UBERON:0003528,6.76e-27,29;UBERON:0002791,6.76e-27,29;UBERON:0001893,6.76e-27,29;UBERON:0010371,7.56e-27,73;UBERON:0002616,3.22e-26,46;UBERON:0003080,6.97e-24,40;UBERON:0003056,9.45e-24,49;UBERON:0002780,1.53e-22,39;UBERON:0001890,1.53e-22,39;UBERON:0006240,1.53e-22,39;UBERON:0010314,1.47e-19,92;UBERON:0000956,1.93e-16,21;UBERON:0001869,1.93e-16,21;UBERON:0000203,1.93e-16,21;UBERON:0002420,5.81e-12,8;UBERON:0007245,5.81e-12,8;UBERON:0010009,5.81e-12,8;UBERON:0010011,5.81e-12,8;UBERON:0000454,5.81e-12,8;UBERON:0000025,3.52e-11,114;UBERON:0001948,3.83e-11,5;UBERON:0002315,3.83e-11,5;UBERON:0002619,2.35e-10,17;UBERON:0003076,2.63e-10,12;UBERON:0003057,2.63e-10,12;UBERON:0004111,6.11e-10,122;UBERON:0002240,3.36e-09,6;UBERON:0005174,3.36e-09,6;UBERON:0001137,3.36e-09,6;UBERON:0011216,2.31e-08,194;UBERON:0002950,9.91e-08,4;UBERON:0001891,9.91e-08,4;UBERON:0009616,9.91e-08,4;UBERON:0010286,9.91e-08,4;UBERON:0002257,1.06e-07,3;UBERON:0001954,1.07e-07,7;UBERON:0003022,1.07e-07,7;UBERON:0002421,1.07e-07,7;UBERON:0000349,1.07e-07,7;UBERON:0002600,1.07e-07,7;UBERON:0000369,2.65e-07,5;UBERON:0002435,2.65e-07,5;UBERON:0000204,2.65e-07,5;UBERON:0010082,2.65e-07,5 | |||
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| ||
|short_description=p3@Sarm1 | |short_description=p3@Sarm1 | ||
}} | }} |
Latest revision as of 18:04, 25 September 2015
Short description: | p3@Sarm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sarm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -67bp_to_ENSMUST00000108287_5end |
EntrezGene: | Sarm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.39e-41 | 23 |
neuroblast (sensu Vertebrata) | 2.39e-41 | 23 |
neuron | 1.75e-29 | 33 |
neuronal stem cell | 1.75e-29 | 33 |
neuroblast | 1.75e-29 | 33 |
electrically signaling cell | 1.75e-29 | 33 |
neural cell | 3.42e-25 | 43 |
ectodermal cell | 1.81e-24 | 44 |
neurectodermal cell | 1.81e-24 | 44 |
electrically responsive cell | 5.43e-24 | 39 |
electrically active cell | 5.43e-24 | 39 |
neuron of cerebral cortex | 1.94e-13 | 6 |
embryonic cell | 5.81e-13 | 70 |
granule cell | 7.47e-08 | 3 |
neuron of the ventral spinal cord | 1.06e-07 | 3 |
somatic stem cell | 1.08e-07 | 91 |
multi fate stem cell | 1.08e-07 | 91 |
hippocampal neuron | 1.49e-07 | 3 |
striatum neuron | 2.54e-07 | 3 |
stem cell | 7.30e-07 | 97 |