FFCP PHASE1:Mm9::chr19:4711393..4711414,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20743 | |EntrezGene=20743 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=39 | |MCL_coexpression_id=39 | ||
|TSSclassifier=NA | |||
|UniProt=Q68FG2 | |UniProt=Q68FG2 | ||
|association_with_transcript=170bp_to_NM_021287,uc008gan.1_5end | |association_with_transcript=170bp_to_NM_021287,uc008gan.1_5end | ||
|cluster_id=chr19:4711393..4711414,+ | |||
|description=CAGE_peak_4_at_Spnb3_5end | |description=CAGE_peak_4_at_Spnb3_5end | ||
|id=chr19:4711393..4711414,+ | |id=chr19:4711393..4711414,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.16e-18!23;CL:0000337!2.16e-18!23;CL:0000540!1.43e-12!33;CL:0000047!1.43e-12!33;CL:0000031!1.43e-12!33;CL:0000404!1.43e-12!33;CL:0000221!4.22e-10!44;CL:0000133!4.22e-10!44;CL:0002319!6.23e-10!43;CL:0000393!3.95e-09!39;CL:0000211!3.95e-09!39;CL:0000055!3.73e-07!50 | |ontology_enrichment_celltype=CL:0000117!2.16e-18!23;CL:0000337!2.16e-18!23;CL:0000540!1.43e-12!33;CL:0000047!1.43e-12!33;CL:0000031!1.43e-12!33;CL:0000404!1.43e-12!33;CL:0000221!4.22e-10!44;CL:0000133!4.22e-10!44;CL:0002319!6.23e-10!43;CL:0000393!3.95e-09!39;CL:0000211!3.95e-09!39;CL:0000055!3.73e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.21e-29,23;CL:0000337,1.21e-29,23;CL:0000540,1.03e-18,33;CL:0000047,1.03e-18,33;CL:0000031,1.03e-18,33;CL:0000404,1.03e-18,33;CL:0000393,7.03e-15,39;CL:0000211,7.03e-15,39;CL:0002319,3.26e-14,43;CL:0000221,9.56e-14,44;CL:0000133,9.56e-14,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.51e-30!71;UBERON:0003075!5.51e-30!71;UBERON:0007284!5.51e-30!71;UBERON:0000073!3.21e-29!75;UBERON:0001016!3.21e-29!75;UBERON:0000033!3.23e-29!63;UBERON:0001049!2.15e-28!52;UBERON:0005068!2.15e-28!52;UBERON:0006241!2.15e-28!52;UBERON:0007135!2.15e-28!52;UBERON:0001017!3.66e-28!73;UBERON:0005743!3.66e-28!73;UBERON:0004121!4.75e-28!102;UBERON:0000924!4.75e-28!102;UBERON:0006601!4.75e-28!102;UBERON:0000955!2.29e-27!50;UBERON:0006238!2.29e-27!50;UBERON:0002616!1.25e-26!49;UBERON:0003056!7.90e-26!49;UBERON:0002020!6.85e-23!34;UBERON:0003080!8.46e-22!40;UBERON:0002780!6.48e-21!39;UBERON:0001890!6.48e-21!39;UBERON:0006240!6.48e-21!39;UBERON:0002791!3.48e-19!29;UBERON:0003528!3.48e-19!29;UBERON:0001893!3.48e-19!29;UBERON:0007811!1.00e-15!86;UBERON:0000956!5.75e-13!21;UBERON:0001869!5.75e-13!21;UBERON:0000203!5.75e-13!21;UBERON:0000153!9.93e-13!94;UBERON:0002619!1.78e-10!17;UBERON:0002021!9.68e-10!10;UBERON:0000411!9.68e-10!10;UBERON:0001950!9.68e-10!10;UBERON:0002420!1.69e-07!8;UBERON:0007245!1.69e-07!8;UBERON:0010009!1.69e-07!8;UBERON:0010011!1.69e-07!8;UBERON:0000454!1.69e-07!8;UBERON:0003076!4.81e-07!12;UBERON:0003057!4.81e-07!12 | |ontology_enrichment_uberon=UBERON:0002346!5.51e-30!71;UBERON:0003075!5.51e-30!71;UBERON:0007284!5.51e-30!71;UBERON:0000073!3.21e-29!75;UBERON:0001016!3.21e-29!75;UBERON:0000033!3.23e-29!63;UBERON:0001049!2.15e-28!52;UBERON:0005068!2.15e-28!52;UBERON:0006241!2.15e-28!52;UBERON:0007135!2.15e-28!52;UBERON:0001017!3.66e-28!73;UBERON:0005743!3.66e-28!73;UBERON:0004121!4.75e-28!102;UBERON:0000924!4.75e-28!102;UBERON:0006601!4.75e-28!102;UBERON:0000955!2.29e-27!50;UBERON:0006238!2.29e-27!50;UBERON:0002616!1.25e-26!49;UBERON:0003056!7.90e-26!49;UBERON:0002020!6.85e-23!34;UBERON:0003080!8.46e-22!40;UBERON:0002780!6.48e-21!39;UBERON:0001890!6.48e-21!39;UBERON:0006240!6.48e-21!39;UBERON:0002791!3.48e-19!29;UBERON:0003528!3.48e-19!29;UBERON:0001893!3.48e-19!29;UBERON:0007811!1.00e-15!86;UBERON:0000956!5.75e-13!21;UBERON:0001869!5.75e-13!21;UBERON:0000203!5.75e-13!21;UBERON:0000153!9.93e-13!94;UBERON:0002619!1.78e-10!17;UBERON:0002021!9.68e-10!10;UBERON:0000411!9.68e-10!10;UBERON:0001950!9.68e-10!10;UBERON:0002420!1.69e-07!8;UBERON:0007245!1.69e-07!8;UBERON:0010009!1.69e-07!8;UBERON:0010011!1.69e-07!8;UBERON:0000454!1.69e-07!8;UBERON:0003076!4.81e-07!12;UBERON:0003057!4.81e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.77e-48,54;UBERON:0001017,5.66e-45,73;UBERON:0001049,1.25e-44,52;UBERON:0005068,1.25e-44,52;UBERON:0006241,1.25e-44,52;UBERON:0007135,1.25e-44,52;UBERON:0001016,1.92e-43,75;UBERON:0002346,8.75e-40,64;UBERON:0003075,8.75e-40,64;UBERON:0007284,8.75e-40,64;UBERON:0002020,4.59e-39,34;UBERON:0000955,1.36e-37,47;UBERON:0006238,1.36e-37,47;UBERON:0004121,2.52e-36,95;UBERON:0000924,2.52e-36,95;UBERON:0006601,2.52e-36,95;UBERON:0002616,2.54e-36,46;UBERON:0010371,1.92e-33,73;UBERON:0003528,2.51e-32,29;UBERON:0002791,2.51e-32,29;UBERON:0001893,2.51e-32,29;UBERON:0003080,7.00e-32,40;UBERON:0002780,2.38e-30,39;UBERON:0001890,2.38e-30,39;UBERON:0006240,2.38e-30,39;UBERON:0003056,1.01e-29,49;UBERON:0010314,3.87e-24,92;UBERON:0000956,4.43e-21,21;UBERON:0001869,4.43e-21,21;UBERON:0000203,4.43e-21,21;UBERON:0002619,1.39e-16,17;UBERON:0002021,2.09e-16,10;UBERON:0000411,2.09e-16,10;UBERON:0001950,2.09e-16,10;UBERON:0000025,2.37e-14,114;UBERON:0004111,1.05e-12,122;UBERON:0003076,1.86e-12,12;UBERON:0003057,1.86e-12,12;UBERON:0002420,2.41e-12,8;UBERON:0007245,2.41e-12,8;UBERON:0010009,2.41e-12,8;UBERON:0010011,2.41e-12,8;UBERON:0000454,2.41e-12,8;UBERON:0011216,3.48e-09,194;UBERON:0002240,4.98e-09,6;UBERON:0005174,4.98e-09,6;UBERON:0001137,4.98e-09,6;UBERON:0000369,3.89e-08,5;UBERON:0002435,3.89e-08,5;UBERON:0000204,3.89e-08,5;UBERON:0010082,3.89e-08,5;UBERON:0001948,1.11e-07,5;UBERON:0002315,1.11e-07,5;UBERON:0000483,1.81e-07,174;UBERON:0002950,2.62e-07,4;UBERON:0001891,2.62e-07,4;UBERON:0009616,2.62e-07,4;UBERON:0010286,2.62e-07,4;UBERON:0000119,2.91e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,6.67644320836673,4.23192783417626,6.97214543856797,0.338844532069132,0,0,0,0,0,0,1.55534418462716,1.75507719831198,2.52389953621658,3.42781181284564,5.52171352379034,1.95985278743926,0.958454710182364,2.75765635983006,13.2139057199266,12.1302971180928,10.1380311949121,5.80299666012853,7.77644970620482,9.37644067002168,8.65467296904281,4.50210088025344,6.41752640662602,3.24091444021034,4.41352210477219,5.77838282058432,0.530083353332288,0.68014404096107,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,23.1296829639122,39.585427587743,0,0,0,0,7.04016005202667,2.28750301409313,1.7591609295801,4.51943232499919,6.13717097592793,6.85700547046548,6.00292673350703,0,0.124406970610093,0,0.631325567659422,0.130120442962704,0.459804208866946,0.180062129805349,0.60281927134286,1.2246569847239,1.66547836370305,0.843315521037559,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,4.6307075570678,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0.38992817423824,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,6.91548950893999,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0.177340233642274,0,1.15184314421485,1.522324745573,0.23467170806371,0,0.220528398054962,0,0,0.120625849856312,0,0.164140899745061,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538283139656854,0,0,0,0,0,0,7.90652579663893,7.82552902062201,12.6037012956667,5.32744865265431,6.85082519770642,6.7985450765073,9.45031500324528,4.95353323546643,6.34399372577886,7.24864436452548,0.726511433089237,1.19707462020309,1.19513524027894,0.972426868273176,0.209613162627982,0.367687016900028,0.666740183404846,1.03017528619447,0.320919209591815,0.505394423527595,0.760437899670719,0.377252682772152,0.37456602987953,0.384150914429216,1.14870937911227,0.476293691283074,0.463537303779422,0,0,0.735994600671987,0,0.177475806159338,0.476872379894642,0,0.564656282491984,0.846146078916765,1.09756783723664,0,0.407412341537585,0,0.474540072496697,0.689531376628944,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0,0.214871054048298,0,0.441182838239031,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,6.67644320836673,4.23192783417626,6.97214543856797,0.338844532069132,0,0,0,0,0,0,1.55534418462716,1.75507719831198,2.52389953621658,3.42781181284564,5.52171352379034,1.95985278743926,0.958454710182364,2.75765635983006,13.2139057199266,12.1302971180928,10.1380311949121,5.80299666012853,7.77644970620482,9.37644067002168,8.65467296904281,4.50210088025344,6.41752640662602,3.24091444021034,4.41352210477219,5.77838282058432,0.530083353332288,0.68014404096107,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,23.1296829639122,39.585427587743,0,0,0,0,7.04016005202667,2.28750301409313,1.7591609295801,4.51943232499919,6.13717097592793,6.85700547046548,6.00292673350703,0,0.124406970610093,0,0.631325567659422,0.130120442962704,0.459804208866946,0.180062129805349,0.60281927134286,1.2246569847239,1.66547836370305,0.843315521037559,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,4.6307075570678,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0.38992817423824,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,6.91548950893999,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0.177340233642274,0,1.15184314421485,1.522324745573,0.23467170806371,0,0.220528398054962,0,0,0.120625849856312,0,0.164140899745061,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538283139656854,0,0,0,0,0,0,7.90652579663893,7.82552902062201,12.6037012956667,5.32744865265431,6.85082519770642,6.7985450765073,9.45031500324528,4.95353323546643,6.34399372577886,7.24864436452548,0.726511433089237,1.19707462020309,1.19513524027894,0.972426868273176,0.209613162627982,0.367687016900028,0.666740183404846,1.03017528619447,0.320919209591815,0.505394423527595,0.760437899670719,0.377252682772152,0.37456602987953,0.384150914429216,1.14870937911227,0.476293691283074,0.463537303779422,0,0,0.735994600671987,0,0.177475806159338,0.476872379894642,0,0.564656282491984,0.846146078916765,1.09756783723664,0,0.407412341537585,0,0.474540072496697,0.689531376628944,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0,0.214871054048298,0,0.441182838239031,0 | ||
|short_description=p4@Spnb3 | |short_description=p4@Spnb3 | ||
}} | }} |
Latest revision as of 21:43, 25 September 2015
Short description: | p4@Spnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Spnb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 170bp_to_NM_021287, uc008gan.1_5end |
EntrezGene: | Spnb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.21e-29 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-29 | 23 |
neuron | 1.03e-18 | 33 |
neuronal stem cell | 1.03e-18 | 33 |
neuroblast | 1.03e-18 | 33 |
electrically signaling cell | 1.03e-18 | 33 |
electrically responsive cell | 7.03e-15 | 39 |
electrically active cell | 7.03e-15 | 39 |
neural cell | 3.26e-14 | 43 |
ectodermal cell | 9.56e-14 | 44 |
neurectodermal cell | 9.56e-14 | 44 |