FFCP PHASE1:Mm9::chr10:80693503..80693514,-: Difference between revisions
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{{FFCP|EntrezGene=16467|HGNC=|MCL_coexpression_id=13|UniProt=Q8BHE3|association_with_transcript=9bp_to_NM_178662,uc007ggo.1_5end|description=CAGE_peak_2_at_Atcay_5end|id=chr10:80693503..80693514,-|ontology_enrichment_celltype=CL:0000117!7.82e-22!23;CL:0000337!7.82e-22!23;CL:0000540!6.34e-17!33;CL:0000047!6.34e-17!33;CL:0000031!6.34e-17!33;CL:0000404!6.34e-17!33;CL:0002319!6.50e-13!43;CL:0000393!1.16e-12!39;CL:0000211!1.16e-12!39;CL:0000221!2.28e-12!44;CL:0000133!2.28e-12!44;CL:0000055!1.33e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.96e-48,23;CL:0000337,4.96e-48,23;CL:0000540,1.08e-31,33;CL:0000047,1.08e-31,33;CL:0000031,1.08e-31,33;CL:0000404,1.08e-31,33;CL:0000393,6.51e-26,39;CL:0000211,6.51e-26,39;CL:0002319,5.86e-23,43;CL:0000221,2.64e-22,44;CL:0000133,2.64e-22,44;CL:0002609,2.65e-13,6;CL:0002321,6.87e-12,70;CL:0002613,5.91e-08,3;CL:0000723,7.10e-08,91;CL:0000048,7.10e-08,91;CL:0000120,1.74e-07,3;CL:0002612,2.60e-07,3;CL:0002614,2.87e-07,3;CL:0002610,4.05e-07,3;CL:0000034,4.66e-07,97;CL:0002608,5.70e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.51e-34!73;UBERON:0005743!2.51e-34!73;UBERON:0000073!8.02e-34!75;UBERON:0001016!8.02e-34!75;UBERON:0002346!5.77e-33!71;UBERON:0003075!5.77e-33!71;UBERON:0007284!5.77e-33!71;UBERON:0001049!7.35e-32!52;UBERON:0005068!7.35e-32!52;UBERON:0006241!7.35e-32!52;UBERON:0007135!7.35e-32!52;UBERON:0000955!9.60e-30!50;UBERON:0006238!9.60e-30!50;UBERON:0000033!4.65e-29!63;UBERON:0002616!8.36e-29!49;UBERON:0004121!3.97e-28!102;UBERON:0000924!3.97e-28!102;UBERON:0006601!3.97e-28!102;UBERON:0003056!2.06e-27!49;UBERON:0002020!1.91e-25!34;UBERON:0003080!5.28e-25!40;UBERON:0002780!3.56e-24!39;UBERON:0001890!3.56e-24!39;UBERON:0006240!3.56e-24!39;UBERON:0007811!1.07e-21!86;UBERON:0002791!1.09e-20!29;UBERON:0003528!1.09e-20!29;UBERON:0001893!1.09e-20!29;UBERON:0000153!4.51e-18!94;UBERON:0000956!8.62e-14!21;UBERON:0001869!8.62e-14!21;UBERON:0000203!8.62e-14!21;UBERON:0002619!3.43e-10!17;UBERON:0002420!3.54e-08!8;UBERON:0007245!3.54e-08!8;UBERON:0010009!3.54e-08!8;UBERON:0010011!3.54e-08!8;UBERON:0000454!3.54e-08!8;UBERON:0002021!4.83e-08!10;UBERON:0000411!4.83e-08!10;UBERON:0001950!4.83e-08!10;UBERON:0003076!3.23e-07!12;UBERON:0003057!3.23e-07!12;UBERON:0002240!9.82e-07!6;UBERON:0005174!9.82e-07!6;UBERON:0001137!9.82e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.35e-40,34;UBERON:0000073,1.74e-38,54;UBERON:0001017,3.60e-37,73;UBERON:0001016,5.80e-36,75;UBERON:0001049,6.92e-35,52;UBERON:0005068,6.92e-35,52;UBERON:0006241,6.92e-35,52;UBERON:0007135,6.92e-35,52;UBERON:0003528,8.25e-30,29;UBERON:0002791,8.25e-30,29;UBERON:0001893,8.25e-30,29;UBERON:0002346,5.70e-27,64;UBERON:0003075,5.70e-27,64;UBERON:0007284,5.70e-27,64;UBERON:0004121,1.11e-26,95;UBERON:0000924,1.11e-26,95;UBERON:0006601,1.11e-26,95;UBERON:0000955,3.64e-26,47;UBERON:0006238,3.64e-26,47;UBERON:0002616,1.49e-24,46;UBERON:0003080,1.88e-24,40;UBERON:0002780,6.07e-23,39;UBERON:0001890,6.07e-23,39;UBERON:0006240,6.07e-23,39;UBERON:0010371,9.67e-23,73;UBERON:0003056,6.65e-19,49;UBERON:0000956,1.12e-17,21;UBERON:0001869,1.12e-17,21;UBERON:0000203,1.12e-17,21;UBERON:0010314,1.57e-16,92;UBERON:0002420,8.56e-14,8;UBERON:0007245,8.56e-14,8;UBERON:0010009,8.56e-14,8;UBERON:0010011,8.56e-14,8;UBERON:0000454,8.56e-14,8;UBERON:0002240,2.17e-13,6;UBERON:0005174,2.17e-13,6;UBERON:0001137,2.17e-13,6;UBERON:0000025,6.18e-12,114;UBERON:0001948,1.10e-11,5;UBERON:0002315,1.10e-11,5;UBERON:0002619,9.76e-11,17;UBERON:0004111,1.12e-10,122;UBERON:0003076,1.23e-10,12;UBERON:0003057,1.23e-10,12;UBERON:0002950,5.83e-09,4;UBERON:0001891,5.83e-09,4;UBERON:0009616,5.83e-09,4;UBERON:0010286,5.83e-09,4;UBERON:0011216,7.97e-09,194;UBERON:0000369,3.35e-08,5;UBERON:0002435,3.35e-08,5;UBERON:0000204,3.35e-08,5;UBERON:0010082,3.35e-08,5;UBERON:0001954,6.68e-08,7;UBERON:0003022,6.68e-08,7;UBERON:0002421,6.68e-08,7;UBERON:0000349,6.68e-08,7;UBERON:0002600,6.68e-08,7;UBERON:0002257,2.60e-07,3;UBERON:0002038,2.87e-07,3;UBERON:0009663,2.87e-07,3;UBERON:0009661,2.87e-07,3;UBERON:0000125,2.87e-07,3;UBERON:0002308,2.87e-07,3;UBERON:0004684,4.05e-07,3;UBERON:0002275,4.05e-07,3|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0.468129052643987,0,0.239316476986009,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,4.45096213891115,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0.384218305321555,3.94020526772215,5.13022565660425,3.78584930432488,4.28476476605705,4.63823935998388,2.08234358665422,2.20444583341944,4.5960939330501,2.20231761998777,2.93680877595932,3.84016333140609,5.14356522147756,3.29355516968675,4.16730696445408,2.23346399201105,4.50210088025344,2.90316670775939,4.12480019663135,2.56269025438385,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.691846491768175,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,2.39665023047716,0.457500602818626,5.27748278874031,3.82413504423008,2.55715457330331,0.62336413367868,2.27137768294861,0,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.30140963567143,0.340182495756639,0.512454881139399,0.937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04695876553905,3.80747065803352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,2.46144541843627,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.214337035031592,0,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,2.86447756719698,3.60891682921744,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,0.51776031175182,0.415149390336707,0,0.341467211508268,0.243106717068294,1.25767897576789,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.760437899670719,0,0.468207537349412,0.448176066834085,0.516919220600519,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0.294397840268795,0,0.532427418478012,1.1921809497366,0.145346416632329,0.470546902076653,0.25384382367503,0.73171189149109,0,0.543216455383447,0,0.118635018124174,0.886540341380071,0,0.154936841185966,0.192906610981141,1.49886346762768,0,0.214871054048298,0,0,0|short_description=p2@Atcay}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16467 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHE3 | |||
|association_with_transcript=9bp_to_NM_178662,uc007ggo.1_5end | |||
|cluster_id=chr10:80693503..80693514,- | |||
|description=CAGE_peak_2_at_Atcay_5end | |||
|id=chr10:80693503..80693514,- | |||
|ontology_enrichment_celltype=CL:0000117!7.82e-22!23;CL:0000337!7.82e-22!23;CL:0000540!6.34e-17!33;CL:0000047!6.34e-17!33;CL:0000031!6.34e-17!33;CL:0000404!6.34e-17!33;CL:0002319!6.50e-13!43;CL:0000393!1.16e-12!39;CL:0000211!1.16e-12!39;CL:0000221!2.28e-12!44;CL:0000133!2.28e-12!44;CL:0000055!1.33e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.96e-48,23;CL:0000337,4.96e-48,23;CL:0000540,1.08e-31,33;CL:0000047,1.08e-31,33;CL:0000031,1.08e-31,33;CL:0000404,1.08e-31,33;CL:0000393,6.51e-26,39;CL:0000211,6.51e-26,39;CL:0002319,5.86e-23,43;CL:0000221,2.64e-22,44;CL:0000133,2.64e-22,44;CL:0002609,2.65e-13,6;CL:0002321,6.87e-12,70;CL:0002613,5.91e-08,3;CL:0000723,7.10e-08,91;CL:0000048,7.10e-08,91;CL:0000120,1.74e-07,3;CL:0002612,2.60e-07,3;CL:0002614,2.87e-07,3;CL:0002610,4.05e-07,3;CL:0000034,4.66e-07,97;CL:0002608,5.70e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.51e-34!73;UBERON:0005743!2.51e-34!73;UBERON:0000073!8.02e-34!75;UBERON:0001016!8.02e-34!75;UBERON:0002346!5.77e-33!71;UBERON:0003075!5.77e-33!71;UBERON:0007284!5.77e-33!71;UBERON:0001049!7.35e-32!52;UBERON:0005068!7.35e-32!52;UBERON:0006241!7.35e-32!52;UBERON:0007135!7.35e-32!52;UBERON:0000955!9.60e-30!50;UBERON:0006238!9.60e-30!50;UBERON:0000033!4.65e-29!63;UBERON:0002616!8.36e-29!49;UBERON:0004121!3.97e-28!102;UBERON:0000924!3.97e-28!102;UBERON:0006601!3.97e-28!102;UBERON:0003056!2.06e-27!49;UBERON:0002020!1.91e-25!34;UBERON:0003080!5.28e-25!40;UBERON:0002780!3.56e-24!39;UBERON:0001890!3.56e-24!39;UBERON:0006240!3.56e-24!39;UBERON:0007811!1.07e-21!86;UBERON:0002791!1.09e-20!29;UBERON:0003528!1.09e-20!29;UBERON:0001893!1.09e-20!29;UBERON:0000153!4.51e-18!94;UBERON:0000956!8.62e-14!21;UBERON:0001869!8.62e-14!21;UBERON:0000203!8.62e-14!21;UBERON:0002619!3.43e-10!17;UBERON:0002420!3.54e-08!8;UBERON:0007245!3.54e-08!8;UBERON:0010009!3.54e-08!8;UBERON:0010011!3.54e-08!8;UBERON:0000454!3.54e-08!8;UBERON:0002021!4.83e-08!10;UBERON:0000411!4.83e-08!10;UBERON:0001950!4.83e-08!10;UBERON:0003076!3.23e-07!12;UBERON:0003057!3.23e-07!12;UBERON:0002240!9.82e-07!6;UBERON:0005174!9.82e-07!6;UBERON:0001137!9.82e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.35e-40,34;UBERON:0000073,1.74e-38,54;UBERON:0001017,3.60e-37,73;UBERON:0001016,5.80e-36,75;UBERON:0001049,6.92e-35,52;UBERON:0005068,6.92e-35,52;UBERON:0006241,6.92e-35,52;UBERON:0007135,6.92e-35,52;UBERON:0003528,8.25e-30,29;UBERON:0002791,8.25e-30,29;UBERON:0001893,8.25e-30,29;UBERON:0002346,5.70e-27,64;UBERON:0003075,5.70e-27,64;UBERON:0007284,5.70e-27,64;UBERON:0004121,1.11e-26,95;UBERON:0000924,1.11e-26,95;UBERON:0006601,1.11e-26,95;UBERON:0000955,3.64e-26,47;UBERON:0006238,3.64e-26,47;UBERON:0002616,1.49e-24,46;UBERON:0003080,1.88e-24,40;UBERON:0002780,6.07e-23,39;UBERON:0001890,6.07e-23,39;UBERON:0006240,6.07e-23,39;UBERON:0010371,9.67e-23,73;UBERON:0003056,6.65e-19,49;UBERON:0000956,1.12e-17,21;UBERON:0001869,1.12e-17,21;UBERON:0000203,1.12e-17,21;UBERON:0010314,1.57e-16,92;UBERON:0002420,8.56e-14,8;UBERON:0007245,8.56e-14,8;UBERON:0010009,8.56e-14,8;UBERON:0010011,8.56e-14,8;UBERON:0000454,8.56e-14,8;UBERON:0002240,2.17e-13,6;UBERON:0005174,2.17e-13,6;UBERON:0001137,2.17e-13,6;UBERON:0000025,6.18e-12,114;UBERON:0001948,1.10e-11,5;UBERON:0002315,1.10e-11,5;UBERON:0002619,9.76e-11,17;UBERON:0004111,1.12e-10,122;UBERON:0003076,1.23e-10,12;UBERON:0003057,1.23e-10,12;UBERON:0002950,5.83e-09,4;UBERON:0001891,5.83e-09,4;UBERON:0009616,5.83e-09,4;UBERON:0010286,5.83e-09,4;UBERON:0011216,7.97e-09,194;UBERON:0000369,3.35e-08,5;UBERON:0002435,3.35e-08,5;UBERON:0000204,3.35e-08,5;UBERON:0010082,3.35e-08,5;UBERON:0001954,6.68e-08,7;UBERON:0003022,6.68e-08,7;UBERON:0002421,6.68e-08,7;UBERON:0000349,6.68e-08,7;UBERON:0002600,6.68e-08,7;UBERON:0002257,2.60e-07,3;UBERON:0002038,2.87e-07,3;UBERON:0009663,2.87e-07,3;UBERON:0009661,2.87e-07,3;UBERON:0000125,2.87e-07,3;UBERON:0002308,2.87e-07,3;UBERON:0004684,4.05e-07,3;UBERON:0002275,4.05e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0.468129052643987,0,0.239316476986009,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,4.45096213891115,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0.384218305321555,3.94020526772215,5.13022565660425,3.78584930432488,4.28476476605705,4.63823935998388,2.08234358665422,2.20444583341944,4.5960939330501,2.20231761998777,2.93680877595932,3.84016333140609,5.14356522147756,3.29355516968675,4.16730696445408,2.23346399201105,4.50210088025344,2.90316670775939,4.12480019663135,2.56269025438385,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.691846491768175,0,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,2.39665023047716,0.457500602818626,5.27748278874031,3.82413504423008,2.55715457330331,0.62336413367868,2.27137768294861,0,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.30140963567143,0.340182495756639,0.512454881139399,0.937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04695876553905,3.80747065803352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,2.46144541843627,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.214337035031592,0,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,2.86447756719698,3.60891682921744,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,0.51776031175182,0.415149390336707,0,0.341467211508268,0.243106717068294,1.25767897576789,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.760437899670719,0,0.468207537349412,0.448176066834085,0.516919220600519,0.476293691283074,0.463537303779422,0.578727661391115,0.412085900803307,0.294397840268795,0,0.532427418478012,1.1921809497366,0.145346416632329,0.470546902076653,0.25384382367503,0.73171189149109,0,0.543216455383447,0,0.118635018124174,0.886540341380071,0,0.154936841185966,0.192906610981141,1.49886346762768,0,0.214871054048298,0,0,0 | |||
|short_description=p2@Atcay | |||
}} |
Latest revision as of 10:52, 26 September 2015
Short description: | p2@Atcay |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atcay_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 9bp_to_NM_178662, uc007ggo.1_5end |
EntrezGene: | Atcay |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.96e-48 | 23 |
neuroblast (sensu Vertebrata) | 4.96e-48 | 23 |
neuron | 1.08e-31 | 33 |
neuronal stem cell | 1.08e-31 | 33 |
neuroblast | 1.08e-31 | 33 |
electrically signaling cell | 1.08e-31 | 33 |
electrically responsive cell | 6.51e-26 | 39 |
electrically active cell | 6.51e-26 | 39 |
neural cell | 5.86e-23 | 43 |
ectodermal cell | 2.64e-22 | 44 |
neurectodermal cell | 2.64e-22 | 44 |
neuron of cerebral cortex | 2.65e-13 | 6 |
embryonic cell | 6.87e-12 | 70 |
striatum neuron | 5.91e-08 | 3 |
somatic stem cell | 7.10e-08 | 91 |
multi fate stem cell | 7.10e-08 | 91 |
granule cell | 1.74e-07 | 3 |
neuron of the ventral spinal cord | 2.60e-07 | 3 |
neuron of the substantia nigra | 2.87e-07 | 3 |
raphe nuclei neuron | 4.05e-07 | 3 |
stem cell | 4.66e-07 | 97 |
hippocampal neuron | 5.70e-07 | 3 |