Personal tools

FFCP PHASE1:Mm9::chr12:86492214..86492225,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=238323
|EntrezGene=238323
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8R2S1
|UniProt=Q8R2S1
|association_with_transcript=0bp_to_ENSMUST00000019379,NM_146244,uc007ogn.2,uc007ogo.2,uc007ogp.2_5end
|association_with_transcript=0bp_to_ENSMUST00000019379,NM_146244,uc007ogn.2,uc007ogo.2,uc007ogp.2_5end
|cluster_id=chr12:86492214..86492225,-
|description=CAGE_peak_2_at_Rps6kl1_5end
|description=CAGE_peak_2_at_Rps6kl1_5end
|id=chr12:86492214..86492225,-
|id=chr12:86492214..86492225,-
|ontology_enrichment_celltype=CL:0000117!4.51e-16!23;CL:0000337!4.51e-16!23;CL:0000540!3.01e-15!33;CL:0000047!3.01e-15!33;CL:0000031!3.01e-15!33;CL:0000404!3.01e-15!33;CL:0002319!3.78e-11!43;CL:0000393!5.86e-11!39;CL:0000211!5.86e-11!39;CL:0000221!1.32e-10!44;CL:0000133!1.32e-10!44;CL:0000055!7.04e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.10e-32,23;CL:0000337,5.10e-32,23;CL:0000540,1.43e-22,33;CL:0000047,1.43e-22,33;CL:0000031,1.43e-22,33;CL:0000404,1.43e-22,33;CL:0000393,3.44e-18,39;CL:0000211,3.44e-18,39;CL:0002319,5.91e-16,43;CL:0000221,1.84e-15,44;CL:0000133,1.84e-15,44;CL:0002609,2.38e-09,6;CL:0002321,1.15e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.08e-27!73;UBERON:0005743!1.08e-27!73;UBERON:0000073!4.98e-27!75;UBERON:0001016!4.98e-27!75;UBERON:0001049!4.96e-24!52;UBERON:0005068!4.96e-24!52;UBERON:0006241!4.96e-24!52;UBERON:0007135!4.96e-24!52;UBERON:0000955!3.88e-23!50;UBERON:0006238!3.88e-23!50;UBERON:0002346!1.42e-22!71;UBERON:0003075!1.42e-22!71;UBERON:0007284!1.42e-22!71;UBERON:0002616!2.93e-22!49;UBERON:0002020!1.12e-21!34;UBERON:0004121!3.34e-21!102;UBERON:0000924!3.34e-21!102;UBERON:0006601!3.34e-21!102;UBERON:0000033!1.69e-19!63;UBERON:0002791!1.68e-18!29;UBERON:0003528!1.68e-18!29;UBERON:0001893!1.68e-18!29;UBERON:0003080!1.12e-17!40;UBERON:0002780!7.16e-17!39;UBERON:0001890!7.16e-17!39;UBERON:0006240!7.16e-17!39;UBERON:0003056!4.95e-16!49;UBERON:0007811!3.91e-13!86;UBERON:0000956!1.54e-12!21;UBERON:0001869!1.54e-12!21;UBERON:0000203!1.54e-12!21;UBERON:0000153!2.83e-10!94;UBERON:0002619!4.84e-10!17;UBERON:0002021!6.01e-09!10;UBERON:0000411!6.01e-09!10;UBERON:0001950!6.01e-09!10;UBERON:0000025!1.23e-08!114;UBERON:0004111!1.13e-07!122;UBERON:0002420!2.99e-07!8;UBERON:0007245!2.99e-07!8;UBERON:0010009!2.99e-07!8;UBERON:0010011!2.99e-07!8;UBERON:0000454!2.99e-07!8;UBERON:0003076!5.71e-07!12;UBERON:0003057!5.71e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.92e-54,54;UBERON:0001017,6.71e-51,73;UBERON:0001049,2.44e-50,52;UBERON:0005068,2.44e-50,52;UBERON:0006241,2.44e-50,52;UBERON:0007135,2.44e-50,52;UBERON:0001016,2.88e-49,75;UBERON:0002020,7.91e-47,34;UBERON:0000955,9.30e-46,47;UBERON:0006238,9.30e-46,47;UBERON:0002616,8.86e-44,46;UBERON:0003528,2.19e-42,29;UBERON:0002791,2.19e-42,29;UBERON:0001893,2.19e-42,29;UBERON:0003080,1.74e-39,40;UBERON:0002346,4.41e-39,64;UBERON:0003075,4.41e-39,64;UBERON:0007284,4.41e-39,64;UBERON:0002780,1.31e-37,39;UBERON:0001890,1.31e-37,39;UBERON:0006240,1.31e-37,39;UBERON:0004121,1.02e-36,95;UBERON:0000924,1.02e-36,95;UBERON:0006601,1.02e-36,95;UBERON:0010371,4.59e-33,73;UBERON:0003056,1.03e-30,49;UBERON:0000956,1.66e-28,21;UBERON:0001869,1.66e-28,21;UBERON:0000203,1.66e-28,21;UBERON:0010314,3.16e-24,92;UBERON:0002619,1.03e-22,17;UBERON:0002021,1.67e-18,10;UBERON:0000411,1.67e-18,10;UBERON:0001950,1.67e-18,10;UBERON:0000025,1.13e-17,114;UBERON:0004111,7.04e-16,122;UBERON:0002420,1.28e-14,8;UBERON:0007245,1.28e-14,8;UBERON:0010009,1.28e-14,8;UBERON:0010011,1.28e-14,8;UBERON:0000454,1.28e-14,8;UBERON:0011216,1.37e-12,194;UBERON:0003076,1.84e-10,12;UBERON:0003057,1.84e-10,12;UBERON:0000369,1.08e-09,5;UBERON:0002435,1.08e-09,5;UBERON:0000204,1.08e-09,5;UBERON:0010082,1.08e-09,5;UBERON:0002950,2.36e-08,4;UBERON:0001891,2.36e-08,4;UBERON:0009616,2.36e-08,4;UBERON:0010286,2.36e-08,4;UBERON:0000483,2.92e-08,174;UBERON:0000119,4.65e-08,176;UBERON:0002240,6.43e-07,6;UBERON:0005174,6.43e-07,6;UBERON:0001137,6.43e-07,6
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0.384218305321555,1.45165457231869,1.08004750665353,1.47227472945967,0.856952953211411,1.54607978666129,1.22490799214954,1.91690942036473,2.75765635983006,3.30347642998166,2.17068474744819,1.53606533256243,2.1101806036831,2.01272815925301,3.12548022334056,1.95428099300967,6.19038871034848,2.59757021220577,1.47314292736834,1.99320353118744,2.05039390407831,0,0.151143120213571,0.579728977403356,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0.484875253135222,0,3.22058876712702,2.30391377494801,0,0,0,0,3.74476598512057,3.66000482254901,3.39266750704734,4.86708096538374,2.81287003063364,2.90903262383384,4.70499662896497,0,0,0,0,0,0,0.540186389416048,0,0.272145996605311,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0.32833492815819,0.56748166682099,0,0.219550115291051,0.134206418760372,4.41608891984667,2.88132914661996,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0.295220295959204,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.358794827043824,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,3.39913891117389,0,0,0.315508219416257,0.390438744296638,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,4.81981974632711,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,1.36175842301515,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0.228620419965,0.100826185136841,0,0,0.467507608726276,0.226730383615211,0.443971906748129,0.0897138566094757,0,0,0,0,0,0.501572104035363,1.12950368523413,3.22227665555024,2.86447756719698,3.60891682921744,3.42541259885321,3.7769694869485,6.07520250208625,1.80128481289688,3.62513927187364,5.69536342927002,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,1.03017528619447,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.37456602987953,0.640251524048693,0.229741875822453,0.476293691283074,0.231768651889711,0.578727661391115,0.824171801606613,0.735994600671987,0.342869252385415,0.354951612318675,0.238436189947321,0,0.376437521661322,0.423073039458382,0.365855945745545,0,0.407412341537585,0.561142271657738,0.593175090620871,0.788035859004508,0.818462086339379,0.464810523557898,0,0.999242311751784,0,0,0.191288332068843,0,0
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,2.02316460859598,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0.384218305321555,1.45165457231869,1.08004750665353,1.47227472945967,0.856952953211411,1.54607978666129,1.22490799214954,1.91690942036473,2.75765635983006,3.30347642998166,2.17068474744819,1.53606533256243,2.1101806036831,2.01272815925301,3.12548022334056,1.95428099300967,6.19038871034848,2.59757021220577,1.47314292736834,1.99320353118744,2.05039390407831,0,0.151143120213571,0.579728977403356,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0.484875253135222,0,3.22058876712702,2.30391377494801,0,0,0,0,3.74476598512057,3.66000482254901,3.39266750704734,4.86708096538374,2.81287003063364,2.90903262383384,4.70499662896497,0,0,0,0,0,0,0.540186389416048,0,0.272145996605311,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0.32833492815819,0.56748166682099,0,0.219550115291051,0.134206418760372,4.41608891984667,2.88132914661996,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0.295220295959204,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.358794827043824,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,3.39913891117389,0,0,0.315508219416257,0.390438744296638,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,4.81981974632711,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,1.36175842301515,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0.228620419965,0.100826185136841,0,0,0.467507608726276,0.226730383615211,0.443971906748129,0.0897138566094757,0,0,0,0,0,0.501572104035363,1.12950368523413,3.22227665555024,2.86447756719698,3.60891682921744,3.42541259885321,3.7769694869485,6.07520250208625,1.80128481289688,3.62513927187364,5.69536342927002,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,1.03017528619447,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.37456602987953,0.640251524048693,0.229741875822453,0.476293691283074,0.231768651889711,0.578727661391115,0.824171801606613,0.735994600671987,0.342869252385415,0.354951612318675,0.238436189947321,0,0.376437521661322,0.423073039458382,0.365855945745545,0,0.407412341537585,0.561142271657738,0.593175090620871,0.788035859004508,0.818462086339379,0.464810523557898,0,0.999242311751784,0,0,0.191288332068843,0,0
|short_description=p2@Rps6kl1
|short_description=p2@Rps6kl1
}}
}}

Latest revision as of 22:38, 26 September 2015

Short description:p2@Rps6kl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rps6kl1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000019379, NM_146244, uc007ogn.2, uc007ogo.2, uc007ogp.2_5end
EntrezGene:Rps6kl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rps6kl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.92e-5454
central nervous system6.71e-5173
neural tube2.44e-5052
neural rod2.44e-5052
future spinal cord2.44e-5052
neural keel2.44e-5052
nervous system2.88e-4975
gray matter7.91e-4734
brain9.30e-4647
future brain9.30e-4647
regional part of brain8.86e-4446
brain grey matter2.19e-4229
regional part of telencephalon2.19e-4229
telencephalon2.19e-4229
anterior neural tube1.74e-3940
neurectoderm4.41e-3964
neural plate4.41e-3964
presumptive neural plate4.41e-3964
regional part of forebrain1.31e-3739
forebrain1.31e-3739
future forebrain1.31e-3739
ectoderm-derived structure1.02e-3695
ectoderm1.02e-3695
presumptive ectoderm1.02e-3695
ecto-epithelium4.59e-3373
pre-chordal neural plate1.03e-3049
cerebral cortex1.66e-2821
cerebral hemisphere1.66e-2821
pallium1.66e-2821
structure with developmental contribution from neural crest3.16e-2492
regional part of cerebral cortex1.03e-2217
occipital lobe1.67e-1810
visual cortex1.67e-1810
neocortex1.67e-1810
tube1.13e-17114
anatomical conduit7.04e-16122
basal ganglion1.28e-148
nuclear complex of neuraxis1.28e-148
aggregate regional part of brain1.28e-148
collection of basal ganglia1.28e-148
cerebral subcortex1.28e-148
organ system subdivision1.37e-12194
posterior neural tube1.84e-1012
chordal neural plate1.84e-1012
corpus striatum1.08e-095
striatum1.08e-095
ventral part of telencephalon1.08e-095
future corpus striatum1.08e-095
regional part of midbrain2.36e-084
midbrain2.36e-084
presumptive midbrain2.36e-084
midbrain neural tube2.36e-084
epithelium2.92e-08174
cell layer4.65e-08176
spinal cord6.43e-076
dorsal region element6.43e-076
dorsum6.43e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:86492214..86492225,-&oldid=4278091"