FFCP PHASE1:Mm9::chr11:119908345..119908375,-: Difference between revisions
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{{FFCP|EntrezGene=11302|HGNC=|MCL_coexpression_id=1|UniProt=B1AZF3|association_with_transcript=8bp_to_ENSMUST00000064307_5end|description=CAGE_peak_4_at_Aatk_5end|id=chr11:119908345..119908375,-|ontology_enrichment_celltype=CL:0000540!5.84e-15!33;CL:0000047!5.84e-15!33;CL:0000031!5.84e-15!33;CL:0000404!5.84e-15!33;CL:0000117!2.23e-14!23;CL:0000337!2.23e-14!23;CL:0000221!1.64e-13!44;CL:0000133!1.64e-13!44;CL:0002319!3.71e-13!43;CL:0000393!2.53e-11!39;CL:0000211!2.53e-11!39;CL:0000055!7.42e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-22,23;CL:0000337,2.05e-22,23;CL:0000540,9.44e-19,33;CL:0000047,9.44e-19,33;CL:0000031,9.44e-19,33;CL:0000404,9.44e-19,33;CL:0000393,6.79e-15,39;CL:0000211,6.79e-15,39;CL:0002319,3.27e-14,43;CL:0000221,9.62e-14,44;CL:0000133,9.62e-14,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.27e-33!73;UBERON:0005743!4.27e-33!73;UBERON:0004121!1.50e-32!102;UBERON:0000924!1.50e-32!102;UBERON:0006601!1.50e-32!102;UBERON:0000073!1.53e-32!75;UBERON:0001016!1.53e-32!75;UBERON:0002346!6.91e-30!71;UBERON:0003075!6.91e-30!71;UBERON:0007284!6.91e-30!71;UBERON:0001049!2.59e-26!52;UBERON:0005068!2.59e-26!52;UBERON:0006241!2.59e-26!52;UBERON:0007135!2.59e-26!52;UBERON:0000033!1.03e-25!63;UBERON:0000955!8.72e-25!50;UBERON:0006238!8.72e-25!50;UBERON:0002616!3.67e-24!49;UBERON:0003056!8.19e-22!49;UBERON:0003080!4.30e-21!40;UBERON:0002780!2.20e-20!39;UBERON:0001890!2.20e-20!39;UBERON:0006240!2.20e-20!39;UBERON:0002020!2.84e-20!34;UBERON:0002791!1.57e-16!29;UBERON:0003528!1.57e-16!29;UBERON:0001893!1.57e-16!29;UBERON:0000153!5.69e-12!94;UBERON:0007811!7.84e-12!86;UBERON:0000956!1.20e-11!21;UBERON:0001869!1.20e-11!21;UBERON:0000203!1.20e-11!21;UBERON:0002619!1.52e-10!17;UBERON:0002021!2.46e-08!10;UBERON:0000411!2.46e-08!10;UBERON:0001950!2.46e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.09e-44,73;UBERON:0001016,6.95e-43,75;UBERON:0000073,2.11e-41,54;UBERON:0004121,6.54e-39,95;UBERON:0000924,6.54e-39,95;UBERON:0006601,6.54e-39,95;UBERON:0001049,7.93e-38,52;UBERON:0005068,7.93e-38,52;UBERON:0006241,7.93e-38,52;UBERON:0007135,7.93e-38,52;UBERON:0002346,2.27e-37,64;UBERON:0003075,2.27e-37,64;UBERON:0007284,2.27e-37,64;UBERON:0010371,5.24e-33,73;UBERON:0002020,3.85e-32,34;UBERON:0000955,5.08e-30,47;UBERON:0006238,5.08e-30,47;UBERON:0002616,8.10e-29,46;UBERON:0003056,3.19e-27,49;UBERON:0003080,2.32e-25,40;UBERON:0010314,4.74e-25,92;UBERON:0003528,1.98e-24,29;UBERON:0002791,1.98e-24,29;UBERON:0001893,1.98e-24,29;UBERON:0002780,5.14e-24,39;UBERON:0001890,5.14e-24,39;UBERON:0006240,5.14e-24,39;UBERON:0002021,1.98e-16,10;UBERON:0000411,1.98e-16,10;UBERON:0001950,1.98e-16,10;UBERON:0000956,1.77e-14,21;UBERON:0001869,1.77e-14,21;UBERON:0000203,1.77e-14,21;UBERON:0002619,3.60e-14,17;UBERON:0003076,1.02e-12,12;UBERON:0003057,1.02e-12,12;UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0000025,1.57e-11,114;UBERON:0004111,6.90e-11,122;UBERON:0002240,1.26e-10,6;UBERON:0005174,1.26e-10,6;UBERON:0001137,1.26e-10,6;UBERON:0001948,3.09e-09,5;UBERON:0002315,3.09e-09,5;UBERON:0011216,7.20e-09,194;UBERON:0002950,2.26e-07,4;UBERON:0001891,2.26e-07,4;UBERON:0009616,2.26e-07,4;UBERON:0010286,2.26e-07,4;UBERON:0000369,2.64e-07,5;UBERON:0002435,2.64e-07,5;UBERON:0000204,2.64e-07,5;UBERON:0010082,2.64e-07,5;UBERON:0000483,3.17e-07,174;UBERON:0000119,5.08e-07,176|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.972149495371417,0.279972843250725,1.43752564364972,0,0,0,0,0,0,6.27181028664753,8.99284664762456,7.60597684207415,0,0,0.449949858640699,0,0,0.898800331555214,0,1.45165457231869,0.810035629990144,0.210324961351382,16.5677570954206,15.2399293256613,1.71487118900936,0.958454710182364,0.919218786610021,20.9220173898839,15.1947932321373,12.7493422602682,5.27545150920775,5.94669683415663,7.29278718779464,10.3297709630511,9.00420176050688,10.6958773443767,10.9012576625257,10.3931326983345,7.08317894136142,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0,1.33597925158342,0.520455980298408,0.913396434936424,0.230615497256059,0.60289056221049,0.823120949949934,0.502666365318702,0,0.144599356919912,0,0,0,0,0,6.73395833126558,8.79676168616511,0,0,0,0,9.28701964309901,1.83000241127451,2.76439574648302,7.82209440865244,5.62574006126727,12.4672826735736,9.89671704713322,0,0.124406970610093,0,1.05220927943237,0,0.459804208866946,0,0.452114453507145,1.29269348387523,1.5373646434182,1.68663104207512,1.03481348295606,0,0.567318240503458,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0.16416746407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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11302 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=B1AZF3 | |||
|association_with_transcript=8bp_to_ENSMUST00000064307_5end | |||
|cluster_id=chr11:119908345..119908375,- | |||
|description=CAGE_peak_4_at_Aatk_5end | |||
|id=chr11:119908345..119908375,- | |||
|ontology_enrichment_celltype=CL:0000540!5.84e-15!33;CL:0000047!5.84e-15!33;CL:0000031!5.84e-15!33;CL:0000404!5.84e-15!33;CL:0000117!2.23e-14!23;CL:0000337!2.23e-14!23;CL:0000221!1.64e-13!44;CL:0000133!1.64e-13!44;CL:0002319!3.71e-13!43;CL:0000393!2.53e-11!39;CL:0000211!2.53e-11!39;CL:0000055!7.42e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-22,23;CL:0000337,2.05e-22,23;CL:0000540,9.44e-19,33;CL:0000047,9.44e-19,33;CL:0000031,9.44e-19,33;CL:0000404,9.44e-19,33;CL:0000393,6.79e-15,39;CL:0000211,6.79e-15,39;CL:0002319,3.27e-14,43;CL:0000221,9.62e-14,44;CL:0000133,9.62e-14,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.27e-33!73;UBERON:0005743!4.27e-33!73;UBERON:0004121!1.50e-32!102;UBERON:0000924!1.50e-32!102;UBERON:0006601!1.50e-32!102;UBERON:0000073!1.53e-32!75;UBERON:0001016!1.53e-32!75;UBERON:0002346!6.91e-30!71;UBERON:0003075!6.91e-30!71;UBERON:0007284!6.91e-30!71;UBERON:0001049!2.59e-26!52;UBERON:0005068!2.59e-26!52;UBERON:0006241!2.59e-26!52;UBERON:0007135!2.59e-26!52;UBERON:0000033!1.03e-25!63;UBERON:0000955!8.72e-25!50;UBERON:0006238!8.72e-25!50;UBERON:0002616!3.67e-24!49;UBERON:0003056!8.19e-22!49;UBERON:0003080!4.30e-21!40;UBERON:0002780!2.20e-20!39;UBERON:0001890!2.20e-20!39;UBERON:0006240!2.20e-20!39;UBERON:0002020!2.84e-20!34;UBERON:0002791!1.57e-16!29;UBERON:0003528!1.57e-16!29;UBERON:0001893!1.57e-16!29;UBERON:0000153!5.69e-12!94;UBERON:0007811!7.84e-12!86;UBERON:0000956!1.20e-11!21;UBERON:0001869!1.20e-11!21;UBERON:0000203!1.20e-11!21;UBERON:0002619!1.52e-10!17;UBERON:0002021!2.46e-08!10;UBERON:0000411!2.46e-08!10;UBERON:0001950!2.46e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.09e-44,73;UBERON:0001016,6.95e-43,75;UBERON:0000073,2.11e-41,54;UBERON:0004121,6.54e-39,95;UBERON:0000924,6.54e-39,95;UBERON:0006601,6.54e-39,95;UBERON:0001049,7.93e-38,52;UBERON:0005068,7.93e-38,52;UBERON:0006241,7.93e-38,52;UBERON:0007135,7.93e-38,52;UBERON:0002346,2.27e-37,64;UBERON:0003075,2.27e-37,64;UBERON:0007284,2.27e-37,64;UBERON:0010371,5.24e-33,73;UBERON:0002020,3.85e-32,34;UBERON:0000955,5.08e-30,47;UBERON:0006238,5.08e-30,47;UBERON:0002616,8.10e-29,46;UBERON:0003056,3.19e-27,49;UBERON:0003080,2.32e-25,40;UBERON:0010314,4.74e-25,92;UBERON:0003528,1.98e-24,29;UBERON:0002791,1.98e-24,29;UBERON:0001893,1.98e-24,29;UBERON:0002780,5.14e-24,39;UBERON:0001890,5.14e-24,39;UBERON:0006240,5.14e-24,39;UBERON:0002021,1.98e-16,10;UBERON:0000411,1.98e-16,10;UBERON:0001950,1.98e-16,10;UBERON:0000956,1.77e-14,21;UBERON:0001869,1.77e-14,21;UBERON:0000203,1.77e-14,21;UBERON:0002619,3.60e-14,17;UBERON:0003076,1.02e-12,12;UBERON:0003057,1.02e-12,12;UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0000025,1.57e-11,114;UBERON:0004111,6.90e-11,122;UBERON:0002240,1.26e-10,6;UBERON:0005174,1.26e-10,6;UBERON:0001137,1.26e-10,6;UBERON:0001948,3.09e-09,5;UBERON:0002315,3.09e-09,5;UBERON:0011216,7.20e-09,194;UBERON:0002950,2.26e-07,4;UBERON:0001891,2.26e-07,4;UBERON:0009616,2.26e-07,4;UBERON:0010286,2.26e-07,4;UBERON:0000369,2.64e-07,5;UBERON:0002435,2.64e-07,5;UBERON:0000204,2.64e-07,5;UBERON:0010082,2.64e-07,5;UBERON:0000483,3.17e-07,174;UBERON:0000119,5.08e-07,176 | |||
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|short_description=p4@Aatk | |||
}} |
Latest revision as of 02:37, 27 September 2015
Short description: | p4@Aatk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Aatk_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 8bp_to_ENSMUST00000064307_5end |
EntrezGene: | Aatk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.05e-22 | 23 |
neuroblast (sensu Vertebrata) | 2.05e-22 | 23 |
neuron | 9.44e-19 | 33 |
neuronal stem cell | 9.44e-19 | 33 |
neuroblast | 9.44e-19 | 33 |
electrically signaling cell | 9.44e-19 | 33 |
electrically responsive cell | 6.79e-15 | 39 |
electrically active cell | 6.79e-15 | 39 |
neural cell | 3.27e-14 | 43 |
ectodermal cell | 9.62e-14 | 44 |
neurectodermal cell | 9.62e-14 | 44 |