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FFCP PHASE1:Mm9::chrX:34442842..34442866,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:34442842..34442866,-
|DHSsupport=NA
|short_description=p3@Nkrf
|DPIdataset=NA
|description=CAGE_peak_3_at_Nkrf_5end
|association_with_transcript=27bp_to_ENSMUST00000057093,NM_029891,uc009sxw.1_5end
|EntrezGene=77286
|EntrezGene=77286
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BY02
|UniProt=Q8BY02
|association_with_transcript=27bp_to_ENSMUST00000057093,NM_029891,uc009sxw.1_5end
|cluster_id=chrX:34442842..34442866,-
|description=CAGE_peak_3_at_Nkrf_5end
|id=chrX:34442842..34442866,-
|ontology_enrichment_celltype=CL:0000540!1.04e-17!33;CL:0000047!1.04e-17!33;CL:0000031!1.04e-17!33;CL:0000404!1.04e-17!33;CL:0000117!6.54e-15!23;CL:0000337!6.54e-15!23;CL:0000393!9.99e-13!39;CL:0000211!9.99e-13!39;CL:0002319!7.52e-12!43;CL:0000221!7.59e-12!44;CL:0000133!7.59e-12!44;CL:0000055!2.65e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.63e-23,23;CL:0000337,4.63e-23,23;CL:0000540,6.69e-16,33;CL:0000047,6.69e-16,33;CL:0000031,6.69e-16,33;CL:0000404,6.69e-16,33;CL:0000393,1.36e-12,39;CL:0000211,1.36e-12,39;CL:0002319,6.47e-11,43;CL:0000221,1.52e-10,44;CL:0000133,1.52e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.60e-26!75;UBERON:0001016!4.60e-26!75;UBERON:0001017!1.53e-25!73;UBERON:0005743!1.53e-25!73;UBERON:0004121!3.49e-25!102;UBERON:0000924!3.49e-25!102;UBERON:0006601!3.49e-25!102;UBERON:0002346!6.33e-23!71;UBERON:0003075!6.33e-23!71;UBERON:0007284!6.33e-23!71;UBERON:0000033!1.67e-20!63;UBERON:0001049!3.24e-20!52;UBERON:0005068!3.24e-20!52;UBERON:0006241!3.24e-20!52;UBERON:0007135!3.24e-20!52;UBERON:0002020!5.30e-20!34;UBERON:0000955!3.77e-19!50;UBERON:0006238!3.77e-19!50;UBERON:0002616!2.19e-18!49;UBERON:0002791!1.17e-16!29;UBERON:0003528!1.17e-16!29;UBERON:0001893!1.17e-16!29;UBERON:0003056!2.04e-16!49;UBERON:0003080!7.45e-15!40;UBERON:0007811!1.46e-14!86;UBERON:0002780!4.49e-14!39;UBERON:0001890!4.49e-14!39;UBERON:0006240!4.49e-14!39;UBERON:0000153!4.96e-12!94;UBERON:0000956!2.06e-11!21;UBERON:0001869!2.06e-11!21;UBERON:0000203!2.06e-11!21;UBERON:0002619!4.02e-09!17;UBERON:0002021!1.14e-08!10;UBERON:0000411!1.14e-08!10;UBERON:0001950!1.14e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.37e-42,54;UBERON:0001049,3.53e-39,52;UBERON:0005068,3.53e-39,52;UBERON:0006241,3.53e-39,52;UBERON:0007135,3.53e-39,52;UBERON:0001017,1.19e-37,73;UBERON:0002020,2.43e-37,34;UBERON:0001016,2.48e-36,75;UBERON:0002346,2.19e-33,64;UBERON:0003075,2.19e-33,64;UBERON:0007284,2.19e-33,64;UBERON:0000955,3.23e-32,47;UBERON:0006238,3.23e-32,47;UBERON:0002616,1.11e-30,46;UBERON:0003528,2.38e-30,29;UBERON:0002791,2.38e-30,29;UBERON:0001893,2.38e-30,29;UBERON:0010371,6.30e-28,73;UBERON:0004121,1.09e-27,95;UBERON:0000924,1.09e-27,95;UBERON:0006601,1.09e-27,95;UBERON:0003080,1.14e-26,40;UBERON:0002780,4.45e-25,39;UBERON:0001890,4.45e-25,39;UBERON:0006240,4.45e-25,39;UBERON:0003056,5.67e-22,49;UBERON:0010314,6.28e-20,92;UBERON:0000956,1.76e-19,21;UBERON:0001869,1.76e-19,21;UBERON:0000203,1.76e-19,21;UBERON:0002021,1.61e-16,10;UBERON:0000411,1.61e-16,10;UBERON:0001950,1.61e-16,10;UBERON:0002619,9.10e-15,17;UBERON:0000025,4.62e-13,114;UBERON:0003076,1.27e-12,12;UBERON:0003057,1.27e-12,12;UBERON:0002420,4.47e-12,8;UBERON:0007245,4.47e-12,8;UBERON:0010009,4.47e-12,8;UBERON:0010011,4.47e-12,8;UBERON:0000454,4.47e-12,8;UBERON:0004111,1.55e-11,122;UBERON:0002240,1.00e-09,6;UBERON:0005174,1.00e-09,6;UBERON:0001137,1.00e-09,6;UBERON:0011216,3.57e-08,194;UBERON:0001948,5.18e-08,5;UBERON:0002315,5.18e-08,5;UBERON:0002950,5.39e-08,4;UBERON:0001891,5.39e-08,4;UBERON:0009616,5.39e-08,4;UBERON:0010286,5.39e-08,4;UBERON:0000369,1.87e-07,5;UBERON:0002435,1.87e-07,5;UBERON:0000204,1.87e-07,5;UBERON:0010082,1.87e-07,5;UBERON:0000483,2.40e-07,174;UBERON:0000119,3.82e-07,176
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,1.267098499365,2.34064526321993,0,0,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.274228867211478,0,1.78590909317247,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,1.45165457231869,1.35005938331691,1.89292465216244,1.42825492201902,3.75476519617743,2.08234358665422,0.958454710182364,0.919218786610021,5.50579404996943,11.8749224419225,14.2854075928306,1.58263545276233,2.10421580285542,1.56274011167028,9.49222196604695,8.4414391504752,8.09830713217094,6.77645746589436,7.97281412474976,5.59198337475902,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0.421333260395256,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0.29688427812965,0.346970653532272,0,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,2.92780797011547,3.77004072264219,0.255457055208591,0.11981512450592,0,0,13.0317856282196,5.49000723382352,3.26701315493447,8.16974304903699,6.64860189058859,9.97382613885888,7.62533936418461,0,0.248813941220186,1.0108910337347,0.420883711772948,0,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.768682321709099,0.843315521037559,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,7.99101804543684,2.77842453424068,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,12.2018448390722,12.5416504653657,0,0,0.94652465824877,0.780877488593277,1.07711698866399,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,8.9969968598106,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0.428674070063185,0,0,0.164549020602121,0,0,0,0,0,0,0.180938774784468,0,0,0,12.7943458387252,0,0,0,0,0,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0.179427713218951,0,0.386379188064381,0,0,0,0.501572104035363,7.34177395402186,7.36520378411483,8.59343270159095,9.96748457593388,8.22099023724771,7.55393897389701,6.75022500231806,9.45674526770863,9.9691329976525,6.21312374102184,0.518936737920883,1.59609949360412,0.170733605754134,0,0.838452650511929,1.10306105070008,1.33348036680969,0.824140228955577,0.320919209591815,1.51618327058278,0.25347929989024,1.50901073108861,0.37456602987953,0.512201219238954,0.516919220600519,0.952587382566147,0.579421629724277,0.964546102318525,1.23625770240992,0.441596760403192,0.685738504770831,0.887379030796687,0.476872379894642,0.726732083161643,0.752875043322645,0.676916863133412,0.365855945745545,0.263069711437843,0.679020569229309,0,1.18635018124174,0.788035859004508,0.409231043169689,0.309873682371932,0.771626443924566,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,1.267098499365,2.34064526321993,0,0,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.274228867211478,0,1.78590909317247,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,1.45165457231869,1.35005938331691,1.89292465216244,1.42825492201902,3.75476519617743,2.08234358665422,0.958454710182364,0.919218786610021,5.50579404996943,11.8749224419225,14.2854075928306,1.58263545276233,2.10421580285542,1.56274011167028,9.49222196604695,8.4414391504752,8.09830713217094,6.77645746589436,7.97281412474976,5.59198337475902,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0.421333260395256,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0.29688427812965,0.346970653532272,0,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,2.92780797011547,3.77004072264219,0.255457055208591,0.11981512450592,0,0,13.0317856282196,5.49000723382352,3.26701315493447,8.16974304903699,6.64860189058859,9.97382613885888,7.62533936418461,0,0.248813941220186,1.0108910337347,0.420883711772948,0,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.768682321709099,0.843315521037559,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,7.99101804543684,2.77842453424068,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,12.2018448390722,12.5416504653657,0,0,0.94652465824877,0.780877488593277,1.07711698866399,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,8.9969968598106,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0.428674070063185,0,0,0.164549020602121,0,0,0,0,0,0,0.180938774784468,0,0,0,12.7943458387252,0,0,0,0,0,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0.179427713218951,0,0.386379188064381,0,0,0,0.501572104035363,7.34177395402186,7.36520378411483,8.59343270159095,9.96748457593388,8.22099023724771,7.55393897389701,6.75022500231806,9.45674526770863,9.9691329976525,6.21312374102184,0.518936737920883,1.59609949360412,0.170733605754134,0,0.838452650511929,1.10306105070008,1.33348036680969,0.824140228955577,0.320919209591815,1.51618327058278,0.25347929989024,1.50901073108861,0.37456602987953,0.512201219238954,0.516919220600519,0.952587382566147,0.579421629724277,0.964546102318525,1.23625770240992,0.441596760403192,0.685738504770831,0.887379030796687,0.476872379894642,0.726732083161643,0.752875043322645,0.676916863133412,0.365855945745545,0.263069711437843,0.679020569229309,0,1.18635018124174,0.788035859004508,0.409231043169689,0.309873682371932,0.771626443924566,0.499621155875892,0.467863216890817,0.644613162144895,0.382576664137687,0,0
|short_description=p3@Nkrf
}}
}}

Latest revision as of 20:01, 1 October 2015

Short description:p3@Nkrf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nkrf_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 27bp_to_ENSMUST00000057093, NM_029891, uc009sxw.1_5end
EntrezGene:Nkrf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nkrf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.03
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D58.17
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C212.20
medulla oblongata, neonate N30.CNhs11200.1396-42A312.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C912.79
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.63e-2323
neuroblast (sensu Vertebrata)4.63e-2323
neuron6.69e-1633
neuronal stem cell6.69e-1633
neuroblast6.69e-1633
electrically signaling cell6.69e-1633
electrically responsive cell1.36e-1239
electrically active cell1.36e-1239
neural cell6.47e-1143
ectodermal cell1.52e-1044
neurectodermal cell1.52e-1044

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.37e-4254
neural tube3.53e-3952
neural rod3.53e-3952
future spinal cord3.53e-3952
neural keel3.53e-3952
central nervous system1.19e-3773
gray matter2.43e-3734
nervous system2.48e-3675
neurectoderm2.19e-3364
neural plate2.19e-3364
presumptive neural plate2.19e-3364
brain3.23e-3247
future brain3.23e-3247
regional part of brain1.11e-3046
brain grey matter2.38e-3029
regional part of telencephalon2.38e-3029
telencephalon2.38e-3029
ecto-epithelium6.30e-2873
ectoderm-derived structure1.09e-2795
ectoderm1.09e-2795
presumptive ectoderm1.09e-2795
anterior neural tube1.14e-2640
regional part of forebrain4.45e-2539
forebrain4.45e-2539
future forebrain4.45e-2539
pre-chordal neural plate5.67e-2249
structure with developmental contribution from neural crest6.28e-2092
cerebral cortex1.76e-1921
cerebral hemisphere1.76e-1921
pallium1.76e-1921
occipital lobe1.61e-1610
visual cortex1.61e-1610
neocortex1.61e-1610
regional part of cerebral cortex9.10e-1517
tube4.62e-13114
posterior neural tube1.27e-1212
chordal neural plate1.27e-1212
basal ganglion4.47e-128
nuclear complex of neuraxis4.47e-128
aggregate regional part of brain4.47e-128
collection of basal ganglia4.47e-128
cerebral subcortex4.47e-128
anatomical conduit1.55e-11122
spinal cord1.00e-096
dorsal region element1.00e-096
dorsum1.00e-096
organ system subdivision3.57e-08194
regional part of spinal cord5.18e-085
gray matter of spinal cord5.18e-085
regional part of midbrain5.39e-084
midbrain5.39e-084
presumptive midbrain5.39e-084
midbrain neural tube5.39e-084
corpus striatum1.87e-075
striatum1.87e-075
ventral part of telencephalon1.87e-075
future corpus striatum1.87e-075
epithelium2.40e-07174
cell layer3.82e-07176
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